RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-223	ENST00000556142	ABCC12	Q96J65	1359 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	ATP2B3	Q16720	1220 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SETDB2	Q96T68	719 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142		K7ELQ4	463 aa	Predicted RBP	11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CHGB	P05060	677 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	IFIT1	P09914	478 aa	Known RBP	11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	MCC	P23508	829 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SCARF1	Q14162	830 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	NECTIN1	Q15223	517 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CCDC158	Q5M9N0	1113 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	BICDL1	Q6ZP65	573 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	MAP4K1	Q92918	833 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	DNAJC2	Q99543	621 aa	Known RBP	11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	NYX	Q9GZU5	481 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	PAG1	Q9NWQ8	432 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CD2AP	Q9Y5K6	639 aa		11.45	□□□□□ -0.58
HNRNPC-223	ENST00000556142	C4A	P0C0L4	1744 aa		11.44	□□□□□ -0.58
HNRNPC-223	ENST00000556142	RFC4	P35249	363 aa		11.44	□□□□□ -0.58
HNRNPC-223	ENST00000556142	MSL1	Q68DK7	614 aa		11.44	□□□□□ -0.58
HNRNPC-223	ENST00000556142	DDX46	Q7L014	1031 aa	Known RBP	11.44	□□□□□ -0.58
HNRNPC-223	ENST00000556142	ZNF589	Q86UQ0	364 aa	Predicted RBP	11.44	□□□□□ -0.58
HNRNPC-223	ENST00000556142	COL23A1	Q86Y22	540 aa	Predicted RBP	11.44	□□□□□ -0.58
HNRNPC-223	ENST00000556142	RASEF	Q8IZ41	740 aa		11.44	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SNX14	Q9Y5W7	946 aa		11.44	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CCDC171	Q6TFL3	1326 aa		11.44	□□□□□ -0.58
HNRNPC-223	ENST00000556142	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.43	□□□□□ -0.58
HNRNPC-223	ENST00000556142	GOLIM4	O00461	696 aa		11.43	□□□□□ -0.58
HNRNPC-223	ENST00000556142	TAF5L	O75529	589 aa		11.43	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SSFA2	P28290	1259 aa		11.43	□□□□□ -0.58
HNRNPC-223	ENST00000556142	TM4SF1	P30408	202 aa		11.43	□□□□□ -0.58
HNRNPC-223	ENST00000556142	APLP1	P51693	650 aa		11.43	□□□□□ -0.58
HNRNPC-223	ENST00000556142	NFIX	Q14938	502 aa		11.43	□□□□□ -0.58
HNRNPC-223	ENST00000556142	PUM3	Q15397	648 aa	Known RBP	11.43	□□□□□ -0.58
HNRNPC-223	ENST00000556142	TTC39A	Q5SRH9	613 aa		11.43	□□□□□ -0.58
HNRNPC-223	ENST00000556142	LPIN2	Q92539	896 aa		11.43	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SPEF2	Q9C093	1822 aa		11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	PHF14	O94880	888 aa		11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	GYS1	P13807	737 aa		11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	ARID4A	P29374	1257 aa	Predicted RBP	11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	IGHMBP2	P38935	993 aa	Known RBP	11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	ZMYM1	Q5SVZ6	1142 aa		11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	TPTE2	Q6XPS3	522 aa		11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	UBR3	Q6ZT12	1888 aa		11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	KIAA1211	Q6ZU35	1233 aa		11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	IL27	Q8NEV9	243 aa		11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	HELB	Q8NG08	1087 aa	Predicted RBP	11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SEC62	Q99442	399 aa	Known RBP	11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	MPHOSPH8	Q99549	860 aa		11.42	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SNAP23	O00161	211 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	KIF3C	O14782	793 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	ATXN8OS	P0DMR3	200 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	MCAM	P43121	646 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	ZAP70	P43403	619 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CHRND	Q07001	517 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SLFNL1	Q499Z3	407 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	MCMDC2	Q4G0Z9	681 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CCDC102B	Q68D86	513 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CDC5L	Q99459	802 aa	Known RBP	11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SLK	Q9H2G2	1235 aa	Predicted RBP	11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	HELLS	Q9NRZ9	838 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	BSDC1	Q9NW68	430 aa	Predicted RBP	11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	RNF113A	O15541	343 aa	Known RBP	11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	ST18	O60284	1047 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	PHKA1	P46020	1223 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	GORAB	Q5T7V8	394 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SPRYD3	Q8NCJ5	442 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CELF1	Q92879	486 aa	Known RBP	11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	TTC14	Q96N46	770 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	NLRP3	Q96P20	1036 aa		11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	RBM8A	Q9Y5S9	174 aa	Known RBP	11.41	□□□□□ -0.58
HNRNPC-223	ENST00000556142	ARAP2	Q8WZ64	1704 aa		11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CARMIL3	Q8ND23	1372 aa		11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	HMGB2	P26583	209 aa	Known RBP	11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	NEK4	P51957	841 aa		11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	TSGA10IP	Q3SY00	556 aa		11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CREB3L3	Q68CJ9	461 aa		11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	PI16	Q6UXB8	463 aa		11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	CCDC129	Q6ZRS4	1044 aa		11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	ANKRD18A	Q8IVF6	992 aa		11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	TM6SF1	Q9BZW5	370 aa		11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	MINPP1	Q9UNW1	487 aa		11.4	□□□□□ -0.58
HNRNPC-223	ENST00000556142	SLC27A2	O14975	620 aa		11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	CYP2E1	P05181	493 aa	Predicted RBP	11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	UQCRFS1P1	P0C7P4	283 aa		11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	SLC5A1	P13866	664 aa		11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	GTF2E1	P29083	439 aa	Predicted RBP	11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	ADCK5	Q3MIX3	580 aa		11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	PRPF40B	Q6NWY9	871 aa	Known RBP	11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	CCDC24	Q8N4L8	307 aa		11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	DNAJC5G	Q8N7S2	189 aa		11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	CHMP5	Q9NZZ3	219 aa		11.39	□□□□□ -0.59
HNRNPC-223	ENST00000556142	MCM2	P49736	904 aa		11.38	□□□□□ -0.59
HNRNPC-223	ENST00000556142	RPS8	P62241	208 aa	Known RBP	11.38	□□□□□ -0.59
HNRNPC-223	ENST00000556142	CUL4A	Q13619	759 aa		11.38	□□□□□ -0.59
HNRNPC-223	ENST00000556142	UBE4A	Q14139	1066 aa		11.38	□□□□□ -0.59
HNRNPC-223	ENST00000556142	PRR5L	Q6MZQ0	368 aa		11.38	□□□□□ -0.59
HNRNPC-223	ENST00000556142	FLAD1	Q8NFF5	587 aa		11.38	□□□□□ -0.59
HNRNPC-223	ENST00000556142	OSBP2	Q969R2	916 aa		11.38	□□□□□ -0.59

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