RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 CCZ1BP86790 482 aa19.91■□□□□ 0.78
PPP4R3A-208ENST00000555462 CCZ1P86791 482 aaPredicted RBP19.91■□□□□ 0.78
PPP4R3A-208ENST00000555462 DHX32Q7L7V1 743 aaKnown RBP19.91■□□□□ 0.78
PPP4R3A-208ENST00000555462 MYL10Q9BUA6 226 aa19.91■□□□□ 0.78
PPP4R3A-208ENST00000555462 SPATA31D1Q6ZQQ2 1576 aa19.9■□□□□ 0.78
PPP4R3A-208ENST00000555462 MED23Q9ULK4 1368 aa19.9■□□□□ 0.78
PPP4R3A-208ENST00000555462 VGLL3A8MV65 326 aa19.9■□□□□ 0.78
PPP4R3A-208ENST00000555462 TTC5Q8N0Z6 440 aa19.9■□□□□ 0.78
PPP4R3A-208ENST00000555462 RAPGEF4Q8WZA2 1011 aa19.9■□□□□ 0.78
PPP4R3A-208ENST00000555462 KIF18AQ8NI77 898 aa19.9■□□□□ 0.78
PPP4R3A-208ENST00000555462 CHMP4CQ96CF2 233 aa19.9■□□□□ 0.78
PPP4R3A-208ENST00000555462 DNAI1Q9UI46 699 aa19.9■□□□□ 0.78
PPP4R3A-208ENST00000555462 FAM208AQ9UK61 1670 aaKnown RBP19.9■□□□□ 0.78
PPP4R3A-208ENST00000555462 TTLL7Q6ZT98 887 aa19.89■□□□□ 0.78
PPP4R3A-208ENST00000555462 OGFRQ9NZT2 677 aa19.89■□□□□ 0.78
PPP4R3A-208ENST00000555462 GOLGB1Q14789 3259 aaKnown RBP19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 PDIA3P30101 505 aaKnown RBP19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 PDILTQ8N807 584 aa19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 PAG1Q9NWQ8 432 aa19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 TUBGCP6Q96RT7 1819 aa19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 CPLX1O14810 134 aa19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 APPP05067 770 aa19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 NKX2-3Q8TAU0 364 aa19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 CLIC6Q96NY7 704 aa19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 U3KPZ7 1027 aaPredicted RBP19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 RGPD1P0DJD0 1748 aa19.89■□□□□ 0.77
PPP4R3A-208ENST00000555462 HSPD1P10809 573 aaKnown RBP19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 ANO10Q9NW15 660 aa19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 HMG20BQ9P0W2 317 aa19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 TBX22Q9Y458 520 aa19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 KLF18A0A0U1RQI7 1052 aa19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 GOLGA8BA8MQT2 603 aa19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 M0R2C6 588 aa19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 IFIT1P09914 478 aaKnown RBP19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 FDPSP14324 419 aaKnown RBP19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 FAM160A1Q05DH4 1040 aa19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 PHKBQ93100 1093 aa19.88■□□□□ 0.77
PPP4R3A-208ENST00000555462 A1BGP04217 495 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 ATP5JP18859 108 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 ADORA1P30542 326 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 GNL2Q13823 731 aaKnown RBP19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 KRT32Q14532 448 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 NBPF11Q86T75 865 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 DPF2Q92785 391 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 SEC31AO94979 1220 aaKnown RBP19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 ARMCX5Q6P1M9 558 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 SYNE4Q8N205 404 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 GTPBP4Q9BZE4 634 aaKnown RBP19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 ORC3Q9UBD5 711 aaPredicted RBP19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 PAXBP1Q9Y5B6 917 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 KAT6BQ8WYB5 2073 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 C8orf76Q96K31 380 aa19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 METTL22Q9BUU2 404 aaPredicted RBP19.87■□□□□ 0.77
PPP4R3A-208ENST00000555462 URI1O94763 535 aaPredicted RBP19.86■□□□□ 0.77
PPP4R3A-208ENST00000555462 E4F1Q66K89 784 aaPredicted RBP19.86■□□□□ 0.77
PPP4R3A-208ENST00000555462 CREBRFQ8IUR6 639 aa19.86■□□□□ 0.77
PPP4R3A-208ENST00000555462 OSBP2Q969R2 916 aa19.86■□□□□ 0.77
PPP4R3A-208ENST00000555462 DDX41Q9UJV9 622 aaKnown RBP19.86■□□□□ 0.77
PPP4R3A-208ENST00000555462 PLEKHG1Q9ULL1 1385 aa19.86■□□□□ 0.77
PPP4R3A-208ENST00000555462 KIF28PB7ZC32 967 aa19.86■□□□□ 0.77
PPP4R3A-208ENST00000555462 MRPS27Q92552 414 aaKnown RBP19.86■□□□□ 0.77
PPP4R3A-208ENST00000555462 ZSCAN16Q9H4T2 348 aaPredicted RBP19.86■□□□□ 0.77
PPP4R3A-208ENST00000555462 RCOR1Q9UKL0 485 aa19.86■□□□□ 0.77
PPP4R3A-208ENST00000555462 RBM6P78332 1123 aaKnown RBP19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 CMTR1Q8N1G2 835 aaKnown RBP19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 ZCCHC17Q9NP64 241 aaKnown RBP19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 PFKFB2O60825 505 aa19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 COBLO75128 1261 aa19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 SFPQP23246 707 aaKnown RBP eCLIP19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 ZNF827Q17R98 1081 aa19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 UTP14CQ5TAP6 766 aaKnown RBP19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 SYNE3Q6ZMZ3 975 aa19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 THEMISQ8N1K5 641 aaPredicted RBP19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 UTP14AQ9BVJ6 771 aaKnown RBP19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 TMEM232C9JQI7 657 aa19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 SERPINC1P01008 464 aa19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 SLC3A2P08195 630 aaKnown RBP19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 CFAP100Q494V2 611 aa19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 ARHGAP29Q52LW3 1261 aa19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 KBTBD3Q8NAB2 608 aa19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 NWD1Q149M9 1564 aa19.85■□□□□ 0.77
PPP4R3A-208ENST00000555462 A0A0G2JS52 829 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 GYS2P54840 703 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 PNOCQ13519 176 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 SCARF1Q14162 830 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 RBM43Q6ZSC3 357 aaKnown RBP19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 SENP2Q9HC62 589 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 BABAM1Q9NWV8 329 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 FOXN1O15353 648 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 HOXB7P09629 217 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 MICU3Q86XE3 530 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 ZNF396Q96N95 335 aaPredicted RBP19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 ZNF446Q9NWS9 450 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 PIK3C2AO00443 1686 aa19.84■□□□□ 0.77
PPP4R3A-208ENST00000555462 RFX5P48382 616 aaPredicted RBP19.83■□□□□ 0.77
PPP4R3A-208ENST00000555462 MAST3O60307 1309 aa19.83■□□□□ 0.77
PPP4R3A-208ENST00000555462 AMOTQ4VCS5 1084 aa19.83■□□□□ 0.77
PPP4R3A-208ENST00000555462 ENGASEQ8NFI3 743 aa19.83■□□□□ 0.77
PPP4R3A-208ENST00000555462 CCDC34Q96HJ3 373 aa19.83■□□□□ 0.77
PPP4R3A-208ENST00000555462 TOMM22Q9NS69 142 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms