RNA–Protein interactions for RNA: ENST00000555215.5

HNRNPC-218, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5

Gene HNRNPC, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-218ENST00000555215 DACT2Q5SW24 774 aa12.95□□□□□ -0.34
HNRNPC-218ENST00000555215 USP17L1Q7RTZ2 530 aa12.95□□□□□ -0.34
HNRNPC-218ENST00000555215 PODNQ7Z5L7 613 aa12.95□□□□□ -0.34
HNRNPC-218ENST00000555215 SULF1Q8IWU6 871 aa12.95□□□□□ -0.34
HNRNPC-218ENST00000555215 CSRNP1Q96S65 589 aa12.95□□□□□ -0.34
HNRNPC-218ENST00000555215 CDC5LQ99459 802 aaKnown RBP12.95□□□□□ -0.34
HNRNPC-218ENST00000555215 ZNF609O15014 1411 aa12.95□□□□□ -0.34
HNRNPC-218ENST00000555215 VAMP4O75379 141 aa12.94□□□□□ -0.34
HNRNPC-218ENST00000555215 SLC10A3P09131 477 aa12.94□□□□□ -0.34
HNRNPC-218ENST00000555215 PLA2G12BQ9BX93 195 aa12.94□□□□□ -0.34
HNRNPC-218ENST00000555215 STK31Q9BXU1 1019 aa12.94□□□□□ -0.34
HNRNPC-218ENST00000555215 RNF186Q9NXI6 227 aa12.94□□□□□ -0.34
HNRNPC-218ENST00000555215 PSME4Q14997 1843 aa12.94□□□□□ -0.34
HNRNPC-218ENST00000555215 MED23Q9ULK4 1368 aa12.94□□□□□ -0.34
HNRNPC-218ENST00000555215 FANCIQ9NVI1 1328 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 ZNF646O15015 1829 aaPredicted RBP12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 SPEF2Q9C093 1822 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 F6X3S4 739 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 UBE2Q2LH0YL09 131 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 CA12O43570 354 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 TRPA1O75762 1119 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 CSF1RP07333 972 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 ITGA6P23229 1130 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 NEXNQ0ZGT2 675 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 DGKZQ13574 1117 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 RASAL3Q86YV0 1011 aa12.93□□□□□ -0.34
HNRNPC-218ENST00000555215 IL16Q14005 1332 aa12.92□□□□□ -0.34
HNRNPC-218ENST00000555215 IRS2Q9Y4H2 1338 aa12.92□□□□□ -0.34
HNRNPC-218ENST00000555215 WNT10BO00744 389 aa12.92□□□□□ -0.34
HNRNPC-218ENST00000555215 SASH1O94885 1247 aa12.92□□□□□ -0.34
HNRNPC-218ENST00000555215 EPHA10Q5JZY3 1008 aa12.92□□□□□ -0.34
HNRNPC-218ENST00000555215 HELBQ8NG08 1087 aaPredicted RBP12.92□□□□□ -0.34
HNRNPC-218ENST00000555215 DNAAF4Q8WXU2 420 aa12.92□□□□□ -0.34
HNRNPC-218ENST00000555215 FBXW7Q969H0 707 aa12.92□□□□□ -0.34
HNRNPC-218ENST00000555215 CCDC102AQ96A19 550 aa12.92□□□□□ -0.34
HNRNPC-218ENST00000555215 PCDHAC2Q9Y5I4 1007 aa12.92□□□□□ -0.34
HNRNPC-218ENST00000555215 ZNF804BA4D1E1 1349 aa12.91□□□□□ -0.34
HNRNPC-218ENST00000555215 TAF5LO75529 589 aa12.91□□□□□ -0.34
HNRNPC-218ENST00000555215 RGS19P49795 217 aa12.91□□□□□ -0.34
HNRNPC-218ENST00000555215 FOXO4P98177 505 aa12.91□□□□□ -0.34
HNRNPC-218ENST00000555215 FKBP5Q13451 457 aaPredicted RBP12.91□□□□□ -0.34
HNRNPC-218ENST00000555215 MRS2Q9HD23 443 aa12.91□□□□□ -0.34
HNRNPC-218ENST00000555215 FZD1Q9UP38 647 aa12.91□□□□□ -0.34
HNRNPC-218ENST00000555215 MYH3P11055 1940 aa12.91□□□□□ -0.34
HNRNPC-218ENST00000555215 AOX1Q06278 1338 aa12.9□□□□□ -0.34
HNRNPC-218ENST00000555215 CHRNDQ07001 517 aa12.9□□□□□ -0.34
HNRNPC-218ENST00000555215 STRIP1Q5VSL9 837 aa12.9□□□□□ -0.34
HNRNPC-218ENST00000555215 KIAA0825Q8IV33 1275 aa12.9□□□□□ -0.34
HNRNPC-218ENST00000555215 CERS5Q8N5B7 392 aa12.9□□□□□ -0.34
HNRNPC-218ENST00000555215 LINS1Q8NG48 757 aa12.9□□□□□ -0.34
HNRNPC-218ENST00000555215 ZBED3Q96IU2 234 aaPredicted RBP12.9□□□□□ -0.34
HNRNPC-218ENST00000555215 CHMP4AQ9BY43 222 aa12.9□□□□□ -0.34
HNRNPC-218ENST00000555215 COA1Q9GZY4 146 aa12.9□□□□□ -0.34
HNRNPC-218ENST00000555215 LEMD3Q9Y2U8 911 aa12.9□□□□□ -0.34
HNRNPC-218ENST00000555215 PITPNM2Q9BZ72 1349 aa12.89□□□□□ -0.35
HNRNPC-218ENST00000555215 IGHMBP2P38935 993 aaKnown RBP12.89□□□□□ -0.35
HNRNPC-218ENST00000555215 GTF2IP78347 998 aa12.89□□□□□ -0.35
HNRNPC-218ENST00000555215 BEND3Q5T5X7 828 aa12.89□□□□□ -0.35
HNRNPC-218ENST00000555215 TTLL5Q6EMB2 1281 aa12.89□□□□□ -0.35
HNRNPC-218ENST00000555215 ZNF594Q96JF6 807 aaPredicted RBP12.89□□□□□ -0.35
HNRNPC-218ENST00000555215 MKRN3Q13064 507 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-218ENST00000555215 PRKG1Q13976 671 aa12.88□□□□□ -0.35
HNRNPC-218ENST00000555215 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
HNRNPC-218ENST00000555215 CD209Q9NNX6 404 aa12.88□□□□□ -0.35
HNRNPC-218ENST00000555215 SAGE1Q9NXZ1 904 aa12.88□□□□□ -0.35
HNRNPC-218ENST00000555215 JAG2Q9Y219 1238 aa12.88□□□□□ -0.35
HNRNPC-218ENST00000555215 PTPN12Q05209 780 aaKnown RBP12.87□□□□□ -0.35
HNRNPC-218ENST00000555215 WDR63Q8IWG1 891 aa12.87□□□□□ -0.35
HNRNPC-218ENST00000555215 MPHOSPH8Q99549 860 aa12.87□□□□□ -0.35
HNRNPC-218ENST00000555215 ANKRD2Q9GZV1 360 aa12.87□□□□□ -0.35
HNRNPC-218ENST00000555215 R3HDMLQ9H3Y0 253 aa12.87□□□□□ -0.35
HNRNPC-218ENST00000555215 PAPPA2Q9BXP8 1791 aa12.86□□□□□ -0.35
HNRNPC-218ENST00000555215 ANKRD18BA2A2Z9 1011 aa12.86□□□□□ -0.35
HNRNPC-218ENST00000555215 TBC1D8O95759 1140 aa12.86□□□□□ -0.35
HNRNPC-218ENST00000555215 FKBP1BP68106 108 aa12.86□□□□□ -0.35
HNRNPC-218ENST00000555215 MLLT1Q03111 559 aaPredicted RBP12.86□□□□□ -0.35
HNRNPC-218ENST00000555215 LMBR1LQ6UX01 489 aa12.86□□□□□ -0.35
HNRNPC-218ENST00000555215 OGFOD1Q8N543 542 aa12.86□□□□□ -0.35
HNRNPC-218ENST00000555215 KAZALD1Q96I82 304 aa12.86□□□□□ -0.35
HNRNPC-218ENST00000555215 MYH16Q9H6N6 1097 aa12.86□□□□□ -0.35
HNRNPC-218ENST00000555215 TTLL12Q14166 644 aaPredicted RBP12.85□□□□□ -0.35
HNRNPC-218ENST00000555215 CHMP3Q9Y3E7 222 aa12.85□□□□□ -0.35
HNRNPC-218ENST00000555215 AKAP11Q9UKA4 1901 aa12.85□□□□□ -0.35
HNRNPC-218ENST00000555215 PDE4DIPQ5VU43 2346 aa12.85□□□□□ -0.35
HNRNPC-218ENST00000555215 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
HNRNPC-218ENST00000555215 F8W031 263 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-218ENST00000555215 PLIN1O60240 522 aa12.84□□□□□ -0.35
HNRNPC-218ENST00000555215 KCNJ4P48050 445 aa12.84□□□□□ -0.35
HNRNPC-218ENST00000555215 SOX10P56693 466 aa12.84□□□□□ -0.35
HNRNPC-218ENST00000555215 IFIT5Q13325 482 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-218ENST00000555215 LDLRAD1Q5T700 205 aa12.84□□□□□ -0.35
HNRNPC-218ENST00000555215 C15orf52Q6ZUT6 534 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-218ENST00000555215 PRMT6Q96LA8 375 aaPredicted RBP12.84□□□□□ -0.35
HNRNPC-218ENST00000555215 PUS3Q9BZE2 481 aaKnown RBP12.84□□□□□ -0.35
HNRNPC-218ENST00000555215 SSC5DA1L4H1 1573 aa12.83□□□□□ -0.36
HNRNPC-218ENST00000555215 IL1R1P14778 569 aa12.83□□□□□ -0.36
HNRNPC-218ENST00000555215 TM4SF4P48230 202 aa12.83□□□□□ -0.36
HNRNPC-218ENST00000555215 FAM9BQ8IZU0 186 aa12.83□□□□□ -0.36
HNRNPC-218ENST00000555215 ZNF296Q8WUU4 475 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms