RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ADAMTSL4Q6UY14 1074 aa5.59□□□□□ -1.51
SCFD1-213ENST00000554776 FBXO11Q86XK2 927 aa5.59□□□□□ -1.51
SCFD1-213ENST00000554776 POP1Q99575 1024 aaKnown RBP5.59□□□□□ -1.51
SCFD1-213ENST00000554776 DCTN4Q9UJW0 460 aa5.59□□□□□ -1.51
SCFD1-213ENST00000554776 MSTNO14793 375 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 DEAF1O75398 565 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-213ENST00000554776 APBA3O96018 575 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 NEFLP07196 543 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 GRIK4Q16099 956 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 TMEM102Q8N9M5 508 aaPredicted RBP5.58□□□□□ -1.52
SCFD1-213ENST00000554776 ALKBH8Q96BT7 664 aaKnown RBP5.58□□□□□ -1.52
SCFD1-213ENST00000554776 DMRTB1Q96MA1 342 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 NACC1Q96RE7 527 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 SPOCK3Q9BQ16 436 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 ZKSCAN3Q9BRR0 538 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 LACRTQ9GZZ8 138 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 ADAM19Q9H013 955 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 MUC3BQ9H195 1237 aa5.58□□□□□ -1.52
SCFD1-213ENST00000554776 SRA1Q9HD15 236 aaKnown RBP5.58□□□□□ -1.52
SCFD1-213ENST00000554776 PDE2AO00408 941 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-213ENST00000554776 SELPP16109 830 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 PTPRAP18433 802 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 CDC27P30260 824 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 ORC1Q13415 861 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 SETDB1Q15047 1291 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 PEAR1Q5VY43 1037 aaPredicted RBP5.57□□□□□ -1.52
SCFD1-213ENST00000554776 TMC7Q7Z402 723 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 MAP4K3Q8IVH8 894 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 GALNT12Q8IXK2 581 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 TMC1Q8TDI8 760 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 HHIPQ96QV1 700 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 OSMRQ99650 979 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 PPME1Q9Y570 386 aa5.57□□□□□ -1.52
SCFD1-213ENST00000554776 C9orf172C9J069 976 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 DLL1O00548 723 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 CPNE3O75131 537 aaKnown RBP5.56□□□□□ -1.52
SCFD1-213ENST00000554776 TRPA1O75762 1119 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 POLR3DP05423 398 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-213ENST00000554776 EPHA1P21709 976 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 MAPK1P28482 360 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 USPL1Q5W0Q7 1092 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 SHISA2Q6UWI4 295 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 NXPE3Q969Y0 559 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 LENG1Q96BZ8 264 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-213ENST00000554776 NIF3L1Q9GZT8 377 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 GZF1Q9H116 711 aaPredicted RBP5.56□□□□□ -1.52
SCFD1-213ENST00000554776 DNAJC25Q9H1X3 360 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 LATS2Q9NRM7 1088 aa5.56□□□□□ -1.52
SCFD1-213ENST00000554776 LINC01387J3KSC0 135 aa5.55□□□□□ -1.52
SCFD1-213ENST00000554776 TM4SF5O14894 197 aa5.55□□□□□ -1.52
SCFD1-213ENST00000554776 ADGRE1Q14246 886 aa5.55□□□□□ -1.52
SCFD1-213ENST00000554776 DSC3Q14574 896 aa5.55□□□□□ -1.52
SCFD1-213ENST00000554776 IGF2-ASQ6U949 168 aa5.55□□□□□ -1.52
SCFD1-213ENST00000554776 BHLHE41Q9C0J9 482 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-213ENST00000554776 SH2B1Q9NRF2 756 aaPredicted RBP5.55□□□□□ -1.52
SCFD1-213ENST00000554776 SOX13Q9UN79 622 aa5.55□□□□□ -1.52
SCFD1-213ENST00000554776 A0A1W2PP55 124 aa5.54□□□□□ -1.52
SCFD1-213ENST00000554776 H3BRJ5 948 aa5.54□□□□□ -1.52
SCFD1-213ENST00000554776 EIF1AYO14602 144 aaKnown RBP5.54□□□□□ -1.52
SCFD1-213ENST00000554776 GATA4P43694 442 aa5.54□□□□□ -1.52
SCFD1-213ENST00000554776 NRG1Q02297 640 aaPredicted RBP5.54□□□□□ -1.52
SCFD1-213ENST00000554776 MBTPS1Q14703 1052 aa5.54□□□□□ -1.52
SCFD1-213ENST00000554776 TXNDC11Q6PKC3 985 aa5.54□□□□□ -1.52
SCFD1-213ENST00000554776 DCAF11Q8TEB1 546 aa5.54□□□□□ -1.52
SCFD1-213ENST00000554776 ASB16Q96NS5 453 aa5.54□□□□□ -1.52
SCFD1-213ENST00000554776 CSRNP1Q96S65 589 aa5.54□□□□□ -1.52
SCFD1-213ENST00000554776 FAM177BA6PVY3 158 aa5.53□□□□□ -1.52
SCFD1-213ENST00000554776 FSCN2O14926 492 aa5.53□□□□□ -1.52
SCFD1-213ENST00000554776 TREHO43280 583 aa5.53□□□□□ -1.52
SCFD1-213ENST00000554776 KIAA0319Q5VV43 1072 aa5.53□□□□□ -1.52
SCFD1-213ENST00000554776 DNAJC14Q6Y2X3 702 aaPredicted RBP5.53□□□□□ -1.52
SCFD1-213ENST00000554776 GALNT11Q8NCW6 608 aa5.53□□□□□ -1.52
SCFD1-213ENST00000554776 BSNDQ8WZ55 320 aa5.53□□□□□ -1.52
SCFD1-213ENST00000554776 WNT8BQ93098 351 aa5.53□□□□□ -1.52
SCFD1-213ENST00000554776 TCF12Q99081 682 aa5.53□□□□□ -1.52
SCFD1-213ENST00000554776 NPHS2Q9NP85 383 aa5.53□□□□□ -1.52
SCFD1-213ENST00000554776 CDC25BP30305 580 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 CABP4P57796 275 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 PIP4K2BP78356 416 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 FAM117BQ6P1L5 589 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 VN1R5Q7Z5H4 357 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 TXNRD3Q86VQ6 643 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 CCNJLQ8IV13 435 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 KLHL23Q8NBE8 558 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 CCDC74AQ96AQ1 378 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 MRPL18Q9H0U6 180 aaKnown RBP5.52□□□□□ -1.53
SCFD1-213ENST00000554776 LIN7BQ9HAP6 207 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 USP21Q9UK80 565 aa5.52□□□□□ -1.53
SCFD1-213ENST00000554776 METTL12A8MUP2 240 aa5.51□□□□□ -1.53
SCFD1-213ENST00000554776 CD68P34810 354 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-213ENST00000554776 PLCB3Q01970 1234 aa5.51□□□□□ -1.53
SCFD1-213ENST00000554776 FMR1Q06787 632 aaKnown RBP eCLIP5.51□□□□□ -1.53
SCFD1-213ENST00000554776 FOXD4L6Q3SYB3 417 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-213ENST00000554776 FOXD4L3Q6VB84 417 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-213ENST00000554776 ZSCAN29Q8IWY8 852 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-213ENST00000554776 TMEM130Q8N3G9 435 aa5.51□□□□□ -1.53
SCFD1-213ENST00000554776 ASAP3Q8TDY4 903 aa5.51□□□□□ -1.53
SCFD1-213ENST00000554776 CARD10Q9BWT7 1032 aa5.51□□□□□ -1.53
SCFD1-213ENST00000554776 OSGEPQ9NPF4 335 aa5.51□□□□□ -1.53
SCFD1-213ENST00000554776 SEC31BQ9NQW1 1179 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms