RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 USP17L4A6NCW7 530 aa16.38■□□□□ 0.21
SHMT2-211ENST00000554310 KLRK1P26718 216 aa16.38■□□□□ 0.21
SHMT2-211ENST00000554310 RSBN1LQ6PCB5 846 aaPredicted RBP16.38■□□□□ 0.21
SHMT2-211ENST00000554310 USP17L1Q7RTZ2 530 aa16.38■□□□□ 0.21
SHMT2-211ENST00000554310 TXNRD3Q86VQ6 643 aa16.38■□□□□ 0.21
SHMT2-211ENST00000554310 DNAJC5GQ8N7S2 189 aa16.38■□□□□ 0.21
SHMT2-211ENST00000554310 TRPM4Q8TD43 1214 aa16.38■□□□□ 0.21
SHMT2-211ENST00000554310 IRS2Q9Y4H2 1338 aa16.38■□□□□ 0.21
SHMT2-211ENST00000554310 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
SHMT2-211ENST00000554310 TAF5LO75529 589 aa16.37■□□□□ 0.21
SHMT2-211ENST00000554310 IFFO2Q5TF58 517 aa16.37■□□□□ 0.21
SHMT2-211ENST00000554310 INTS3Q68E01 1043 aaKnown RBP16.37■□□□□ 0.21
SHMT2-211ENST00000554310 ATF7IPQ6VMQ6 1270 aa16.37■□□□□ 0.21
SHMT2-211ENST00000554310 HELBQ8NG08 1087 aaPredicted RBP16.37■□□□□ 0.21
SHMT2-211ENST00000554310 KLRG1Q96E93 195 aa16.37■□□□□ 0.21
SHMT2-211ENST00000554310 MROH5Q6ZUA9 1318 aa16.37■□□□□ 0.21
SHMT2-211ENST00000554310 MYO3BQ8WXR4 1341 aa16.37■□□□□ 0.21
SHMT2-211ENST00000554310 BCAR3O75815 825 aa16.36■□□□□ 0.21
SHMT2-211ENST00000554310 TRIM27P14373 513 aa16.36■□□□□ 0.21
SHMT2-211ENST00000554310 STRIP1Q5VSL9 837 aa16.36■□□□□ 0.21
SHMT2-211ENST00000554310 ZNF804AQ7Z570 1209 aa16.36■□□□□ 0.21
SHMT2-211ENST00000554310 PGAP2Q9UHJ9 254 aa16.36■□□□□ 0.21
SHMT2-211ENST00000554310 TMEM88BA6NKF7 163 aa16.35■□□□□ 0.21
SHMT2-211ENST00000554310 HIRAP54198 1017 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-211ENST00000554310 ZNF280AP59817 542 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-211ENST00000554310 DACT2Q5SW24 774 aa16.35■□□□□ 0.21
SHMT2-211ENST00000554310 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
SHMT2-211ENST00000554310 RIPOR2Q9Y4F9 1068 aa16.35■□□□□ 0.21
SHMT2-211ENST00000554310 ARAP2Q8WZ64 1704 aa16.34■□□□□ 0.21
SHMT2-211ENST00000554310 UBE4AQ14139 1066 aa16.34■□□□□ 0.21
SHMT2-211ENST00000554310 KIF4BQ2VIQ3 1234 aa16.34■□□□□ 0.21
SHMT2-211ENST00000554310 TBC1D10BQ4KMP7 808 aaPredicted RBP16.34■□□□□ 0.21
SHMT2-211ENST00000554310 ZKSCAN2Q63HK3 967 aa16.34■□□□□ 0.21
SHMT2-211ENST00000554310 SAMD7Q7Z3H4 446 aa16.34■□□□□ 0.21
SHMT2-211ENST00000554310 GMLQ99445 158 aa16.34■□□□□ 0.21
SHMT2-211ENST00000554310 MEIS3Q99687 375 aa16.34■□□□□ 0.21
SHMT2-211ENST00000554310 PUS3Q9BZE2 481 aaKnown RBP16.34■□□□□ 0.21
SHMT2-211ENST00000554310 CD209Q9NNX6 404 aa16.34■□□□□ 0.21
SHMT2-211ENST00000554310 SNAP23O00161 211 aa16.33■□□□□ 0.2
SHMT2-211ENST00000554310 PLIN1O60240 522 aa16.33■□□□□ 0.2
SHMT2-211ENST00000554310 GNAI3P08754 354 aa16.33■□□□□ 0.2
SHMT2-211ENST00000554310 USP17L8P0C7I0 530 aa16.33■□□□□ 0.2
SHMT2-211ENST00000554310 FBXW7Q969H0 707 aa16.33■□□□□ 0.2
SHMT2-211ENST00000554310 LRRFIP2Q9Y608 721 aaKnown RBP16.33■□□□□ 0.2
SHMT2-211ENST00000554310 EGFRP00533 1210 aa16.32■□□□□ 0.2
SHMT2-211ENST00000554310 IL1R1P14778 569 aa16.32■□□□□ 0.2
SHMT2-211ENST00000554310 RFX5P48382 616 aaPredicted RBP16.32■□□□□ 0.2
SHMT2-211ENST00000554310 MMP14P50281 582 aa16.32■□□□□ 0.2
SHMT2-211ENST00000554310 LRRC24Q50LG9 513 aa16.32■□□□□ 0.2
SHMT2-211ENST00000554310 METTL24Q5JXM2 366 aa16.32■□□□□ 0.2
SHMT2-211ENST00000554310 CDC37L1Q7L3B6 337 aa16.32■□□□□ 0.2
SHMT2-211ENST00000554310 VGLL2Q8N8G2 317 aa16.32■□□□□ 0.2
SHMT2-211ENST00000554310 CNTNAP1P78357 1384 aa16.31■□□□□ 0.2
SHMT2-211ENST00000554310 EYA2O00167 538 aa16.31■□□□□ 0.2
SHMT2-211ENST00000554310 TRAF5O00463 557 aa16.31■□□□□ 0.2
SHMT2-211ENST00000554310 TTLL5Q6EMB2 1281 aa16.31■□□□□ 0.2
SHMT2-211ENST00000554310 OGFOD1Q8N543 542 aa16.31■□□□□ 0.2
SHMT2-211ENST00000554310 JMYQ8N9B5 988 aa16.31■□□□□ 0.2
SHMT2-211ENST00000554310 KLHDC4Q8TBB5 520 aa16.31■□□□□ 0.2
SHMT2-211ENST00000554310 GLIS2Q9BZE0 524 aaPredicted RBP16.31■□□□□ 0.2
SHMT2-211ENST00000554310 MYOZ2Q9NPC6 264 aa16.31■□□□□ 0.2
SHMT2-211ENST00000554310 FBXO3Q9UK99 471 aa16.31■□□□□ 0.2
SHMT2-211ENST00000554310 PDE8BO95263 885 aa16.3■□□□□ 0.2
SHMT2-211ENST00000554310 GTF2IP78347 998 aa16.3■□□□□ 0.2
SHMT2-211ENST00000554310 PTPN12Q05209 780 aaKnown RBP16.3■□□□□ 0.2
SHMT2-211ENST00000554310 RBM26Q5T8P6 1007 aaKnown RBP16.3■□□□□ 0.2
SHMT2-211ENST00000554310 CLUAP1Q96AJ1 413 aa16.3■□□□□ 0.2
SHMT2-211ENST00000554310 TNNQ9UQP3 1299 aa16.3■□□□□ 0.2
SHMT2-211ENST00000554310 POLR2AP24928 1970 aaKnown RBP16.29■□□□□ 0.2
SHMT2-211ENST00000554310 CIAO1O76071 339 aa16.29■□□□□ 0.2
SHMT2-211ENST00000554310 MTX1Q13505 466 aa16.29■□□□□ 0.2
SHMT2-211ENST00000554310 PUM3Q15397 648 aaKnown RBP16.29■□□□□ 0.2
SHMT2-211ENST00000554310 FTSJ3Q8IY81 847 aaKnown RBP16.29■□□□□ 0.2
SHMT2-211ENST00000554310 DCPSQ96C86 337 aaKnown RBP16.29■□□□□ 0.2
SHMT2-211ENST00000554310 MXD3Q9BW11 206 aa16.29■□□□□ 0.2
SHMT2-211ENST00000554310 GGA3Q9NZ52 723 aa16.29■□□□□ 0.2
SHMT2-211ENST00000554310 MYH13Q9UKX3 1938 aa16.28■□□□□ 0.2
SHMT2-211ENST00000554310 RASSF10A6NK89 507 aa16.28■□□□□ 0.2
SHMT2-211ENST00000554310 HIBADHP31937 336 aaKnown RBP16.28■□□□□ 0.2
SHMT2-211ENST00000554310 FKBP1AP62942 108 aaKnown RBP16.28■□□□□ 0.2
SHMT2-211ENST00000554310 KRT26Q7Z3Y9 468 aa16.28■□□□□ 0.2
SHMT2-211ENST00000554310 MKRN1Q9UHC7 482 aaKnown RBP16.28■□□□□ 0.2
SHMT2-211ENST00000554310 HDAC9Q9UKV0 1011 aa16.28■□□□□ 0.2
SHMT2-211ENST00000554310 ABT1Q9ULW3 272 aaKnown RBP16.28■□□□□ 0.2
SHMT2-211ENST00000554310 ECM29Q5VYK3 1845 aa16.28■□□□□ 0.2
SHMT2-211ENST00000554310 THSD7BQ9C0I4 1608 aa16.27■□□□□ 0.2
SHMT2-211ENST00000554310 FAM205AQ6ZU69 1335 aa16.27■□□□□ 0.2
SHMT2-211ENST00000554310 PITPNM2Q9BZ72 1349 aa16.27■□□□□ 0.2
SHMT2-211ENST00000554310 SASH1O94885 1247 aa16.27■□□□□ 0.2
SHMT2-211ENST00000554310 GNAI2P04899 355 aa16.27■□□□□ 0.2
SHMT2-211ENST00000554310 GYG1P46976 350 aa16.27■□□□□ 0.2
SHMT2-211ENST00000554310 FMR1Q06787 632 aaKnown RBP eCLIP16.27■□□□□ 0.2
SHMT2-211ENST00000554310 ATG9AQ7Z3C6 839 aa16.27■□□□□ 0.2
SHMT2-211ENST00000554310 KIAA0825Q8IV33 1275 aa16.27■□□□□ 0.2
SHMT2-211ENST00000554310 SULF1Q8IWU6 871 aa16.27■□□□□ 0.2
SHMT2-211ENST00000554310 DZIP1LQ8IYY4 767 aaKnown RBP16.27■□□□□ 0.2
SHMT2-211ENST00000554310 TMEM57Q8N5G2 664 aa16.27■□□□□ 0.2
SHMT2-211ENST00000554310 TDRD7Q8NHU6 1098 aaKnown RBP16.27■□□□□ 0.2
SHMT2-211ENST00000554310 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.2
SHMT2-211ENST00000554310 COPRSQ9NQ92 184 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms