RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 GPHNQ9NQX3 736 aaPredicted RBP17.15■□□□□ 0.34
ACTN1-211ENST00000553882 PYCARDQ9ULZ3 195 aa17.15■□□□□ 0.34
ACTN1-211ENST00000553882 LAMA4Q16363 1823 aa17.14■□□□□ 0.33
ACTN1-211ENST00000553882 EXOSC10Q01780 885 aaKnown RBP17.14■□□□□ 0.33
ACTN1-211ENST00000553882 CFAP45Q9UL16 551 aa17.14■□□□□ 0.33
ACTN1-211ENST00000553882 IL2RBP14784 551 aa17.14■□□□□ 0.33
ACTN1-211ENST00000553882 WASHC4Q2M389 1173 aa17.14■□□□□ 0.33
ACTN1-211ENST00000553882 PI16Q6UXB8 463 aa17.14■□□□□ 0.33
ACTN1-211ENST00000553882 ARID3AQ99856 593 aa17.14■□□□□ 0.33
ACTN1-211ENST00000553882 TJP1Q07157 1748 aa17.13■□□□□ 0.33
ACTN1-211ENST00000553882 LLPHQ9BRT6 129 aaKnown RBP17.13■□□□□ 0.33
ACTN1-211ENST00000553882 KCPQ6ZWJ8 1503 aa17.13■□□□□ 0.33
ACTN1-211ENST00000553882 PTGS1P23219 599 aa17.13■□□□□ 0.33
ACTN1-211ENST00000553882 SCARF1Q14162 830 aa17.13■□□□□ 0.33
ACTN1-211ENST00000553882 TTC39AQ5SRH9 613 aa17.13■□□□□ 0.33
ACTN1-211ENST00000553882 PDCL3Q9H2J4 239 aa17.13■□□□□ 0.33
ACTN1-211ENST00000553882 PDIA3P30101 505 aaKnown RBP17.12■□□□□ 0.33
ACTN1-211ENST00000553882 ADD1P35611 737 aaKnown RBP17.12■□□□□ 0.33
ACTN1-211ENST00000553882 ZNF165P49910 485 aa17.12■□□□□ 0.33
ACTN1-211ENST00000553882 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
ACTN1-211ENST00000553882 TSC1Q92574 1164 aa17.12■□□□□ 0.33
ACTN1-211ENST00000553882 XAGE2Q96GT9 111 aa17.12■□□□□ 0.33
ACTN1-211ENST00000553882 NUP188Q5SRE5 1749 aa17.12■□□□□ 0.33
ACTN1-211ENST00000553882 PLEKHG2Q9H7P9 1386 aa17.12■□□□□ 0.33
ACTN1-211ENST00000553882 TAF7LQ5H9L4 462 aa17.12■□□□□ 0.33
ACTN1-211ENST00000553882 CCDC158Q5M9N0 1113 aa17.12■□□□□ 0.33
ACTN1-211ENST00000553882 RBM43Q6ZSC3 357 aaKnown RBP17.12■□□□□ 0.33
ACTN1-211ENST00000553882 DRC7Q8IY82 874 aa17.12■□□□□ 0.33
ACTN1-211ENST00000553882 USP28Q96RU2 1077 aa17.12■□□□□ 0.33
ACTN1-211ENST00000553882 A0A087WWV3 80 aa17.11■□□□□ 0.33
ACTN1-211ENST00000553882 CIAO1O76071 339 aa17.11■□□□□ 0.33
ACTN1-211ENST00000553882 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
ACTN1-211ENST00000553882 RAB11FIP4Q86YS3 637 aa17.11■□□□□ 0.33
ACTN1-211ENST00000553882 TRIM5Q9C035 493 aa17.11■□□□□ 0.33
ACTN1-211ENST00000553882 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
ACTN1-211ENST00000553882 GOLGA6L6A8MZA4 724 aa17.11■□□□□ 0.33
ACTN1-211ENST00000553882 DYNC1I1O14576 645 aa17.11■□□□□ 0.33
ACTN1-211ENST00000553882 TCIRG1Q13488 830 aa17.11■□□□□ 0.33
ACTN1-211ENST00000553882 KIAA1524Q8TCG1 905 aa17.11■□□□□ 0.33
ACTN1-211ENST00000553882 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
ACTN1-211ENST00000553882 NAA16Q6N069 864 aaPredicted RBP17.1■□□□□ 0.33
ACTN1-211ENST00000553882 CCAR1Q8IX12 1150 aaKnown RBP17.1■□□□□ 0.33
ACTN1-211ENST00000553882 SPTLC3Q9NUV7 552 aa17.1■□□□□ 0.33
ACTN1-211ENST00000553882 NRBP1Q9UHY1 535 aa17.1■□□□□ 0.33
ACTN1-211ENST00000553882 COL5A2P05997 1499 aaPredicted RBP17.1■□□□□ 0.33
ACTN1-211ENST00000553882 FOXP2O15409 715 aa17.1■□□□□ 0.33
ACTN1-211ENST00000553882 OTUD7BQ6GQQ9 843 aa17.1■□□□□ 0.33
ACTN1-211ENST00000553882 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
ACTN1-211ENST00000553882 GOLPH3LQ9H4A5 285 aa17.1■□□□□ 0.33
ACTN1-211ENST00000553882 TMOD3Q9NYL9 352 aa17.1■□□□□ 0.33
ACTN1-211ENST00000553882 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
ACTN1-211ENST00000553882 GPTP24298 496 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 ZAP70P43403 619 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 EVA1CP58658 441 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 CCDC186Q7Z3E2 898 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 DNAJC10Q8IXB1 793 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 ERCC4Q92889 916 aaPredicted RBP17.09■□□□□ 0.33
ACTN1-211ENST00000553882 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 SALL1Q9NSC2 1324 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 FAM177BA6PVY3 158 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 LRMPQ12912 555 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 NKX1-1Q15270 411 aaPredicted RBP17.09■□□□□ 0.33
ACTN1-211ENST00000553882 PUS7LQ9H0K6 701 aaKnown RBP17.09■□□□□ 0.33
ACTN1-211ENST00000553882 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
ACTN1-211ENST00000553882 KAT6BQ8WYB5 2073 aa17.08■□□□□ 0.33
ACTN1-211ENST00000553882 CARMIL3Q8ND23 1372 aa17.08■□□□□ 0.33
ACTN1-211ENST00000553882 FGAP02671 866 aa17.08■□□□□ 0.33
ACTN1-211ENST00000553882 ME1P48163 572 aa17.08■□□□□ 0.33
ACTN1-211ENST00000553882 ILDR1Q86SU0 546 aaPredicted RBP17.08■□□□□ 0.33
ACTN1-211ENST00000553882 MYRIPQ8NFW9 859 aa17.08■□□□□ 0.33
ACTN1-211ENST00000553882 TAOK2Q9UL54 1235 aa17.08■□□□□ 0.33
ACTN1-211ENST00000553882 IFIT5Q13325 482 aaKnown RBP17.08■□□□□ 0.32
ACTN1-211ENST00000553882 GLIPR1L2Q4G1C9 344 aa17.08■□□□□ 0.32
ACTN1-211ENST00000553882 FBXW7Q969H0 707 aa17.08■□□□□ 0.32
ACTN1-211ENST00000553882 RCOR1Q9UKL0 485 aa17.08■□□□□ 0.32
ACTN1-211ENST00000553882 FDPSP14324 419 aaKnown RBP17.07■□□□□ 0.32
ACTN1-211ENST00000553882 IMMTQ16891 758 aaKnown RBP17.07■□□□□ 0.32
ACTN1-211ENST00000553882 ZNF274Q96GC6 653 aaPredicted RBP17.07■□□□□ 0.32
ACTN1-211ENST00000553882 CARD10Q9BWT7 1032 aa17.07■□□□□ 0.32
ACTN1-211ENST00000553882 KIF6Q6ZMV9 814 aa17.07■□□□□ 0.32
ACTN1-211ENST00000553882 C11orf57Q6ZUT1 292 aaPredicted RBP17.07■□□□□ 0.32
ACTN1-211ENST00000553882 GJB4Q9NTQ9 266 aa17.07■□□□□ 0.32
ACTN1-211ENST00000553882 AKAP2Q9Y2D5 859 aa17.07■□□□□ 0.32
ACTN1-211ENST00000553882 ZNF75DP51815 510 aa17.06■□□□□ 0.32
ACTN1-211ENST00000553882 CCDC73Q6ZRK6 1079 aa17.06■□□□□ 0.32
ACTN1-211ENST00000553882 TDRD7Q8NHU6 1098 aaKnown RBP17.06■□□□□ 0.32
ACTN1-211ENST00000553882 POLR3DP05423 398 aaPredicted RBP17.06■□□□□ 0.32
ACTN1-211ENST00000553882 SNW1Q13573 536 aaKnown RBP17.06■□□□□ 0.32
ACTN1-211ENST00000553882 KLF18A0A0U1RQI7 1052 aa17.05■□□□□ 0.32
ACTN1-211ENST00000553882 PRC1O43663 620 aa17.05■□□□□ 0.32
ACTN1-211ENST00000553882 TPM3P06753 285 aa17.05■□□□□ 0.32
ACTN1-211ENST00000553882 HLFQ16534 295 aa17.05■□□□□ 0.32
ACTN1-211ENST00000553882 METTL24Q5JXM2 366 aa17.05■□□□□ 0.32
ACTN1-211ENST00000553882 FSIP1Q8NA03 581 aa17.05■□□□□ 0.32
ACTN1-211ENST00000553882 PRIMPOLQ96LW4 560 aa17.05■□□□□ 0.32
ACTN1-211ENST00000553882 TNS2Q63HR2 1409 aa17.05■□□□□ 0.32
ACTN1-211ENST00000553882 GOLGA8BA8MQT2 603 aa17.05■□□□□ 0.32
ACTN1-211ENST00000553882 KINO60870 393 aaKnown RBP17.05■□□□□ 0.32
ACTN1-211ENST00000553882 PLA2G4DQ86XP0 818 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms