RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SENP3-EIF4A1A0A087X0R7 540 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 FIGNL2A6NMB9 653 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 F6X3S4 739 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 ITPKAP23677 461 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 SOX18P35713 384 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 ETFBP38117 255 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 NFX1Q12986 1120 aaKnown RBP6□□□□□ -1.45
LSM6P2-201ENST00000552208 COL9A2Q14055 689 aaPredicted RBP6□□□□□ -1.45
LSM6P2-201ENST00000552208 BMS1Q14692 1282 aaKnown RBP6□□□□□ -1.45
LSM6P2-201ENST00000552208 LBRQ14739 615 aaKnown RBP6□□□□□ -1.45
LSM6P2-201ENST00000552208 TCEAL1Q15170 157 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 NFE2L2Q16236 605 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 COL13A1Q5TAT6 717 aaPredicted RBP6□□□□□ -1.45
LSM6P2-201ENST00000552208 CEP120Q8N960 986 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 ZKSCAN3Q9BRR0 538 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 STRIP2Q9ULQ0 834 aa6□□□□□ -1.45
LSM6P2-201ENST00000552208 K7ELQ4 463 aaPredicted RBP5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 NFKBIEO00221 500 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 MAP3K6O95382 1288 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 LIG3P49916 1009 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 LMNB2Q03252 620 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 TNP2Q05952 138 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 TRIM46Q7Z4K8 759 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 CRIPAKQ8N1N5 446 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 PGBD3Q8N328 593 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 SPACA7Q96KW9 195 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 ZFYVE1Q9HBF4 777 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 STRN4Q9NRL3 753 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 NDFIP2Q9NV92 336 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 TLR7Q9NYK1 1049 aaKnown RBP5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 TLR6Q9Y2C9 796 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 AKAP2Q9Y2D5 859 aa5.99□□□□□ -1.45
LSM6P2-201ENST00000552208 PHF20L1A8MW92 1017 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 ENC1O14682 589 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 FBXO24O75426 580 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 PF4P02776 101 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 SSBP05455 408 aaKnown RBP eCLIP5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 CELA3AP09093 270 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 ACPPP15309 386 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 GRIA4P48058 902 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 CAMK2GQ13555 558 aaPredicted RBP5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 LAMC2Q13753 1193 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 DTHD1Q6ZMT9 781 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 AGMOQ6ZNB7 445 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 KRT25Q7Z3Z0 450 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 SLITRK4Q8IW52 837 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 OSMRQ99650 979 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 BHLHE41Q9C0J9 482 aaPredicted RBP5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 EFCC1Q9HA90 598 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 DZANK1Q9NVP4 752 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 DNMT3LQ9UJW3 386 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 SUPT16HQ9Y5B9 1047 aaKnown RBP5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 PCDHGC4Q9Y5F7 938 aa5.98□□□□□ -1.45
LSM6P2-201ENST00000552208 FAM187AA6NFU0 413 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 ATXN7O15265 892 aaPredicted RBP5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 RARAP10276 462 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 TFE3P19532 575 aaPredicted RBP5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 HSD3B2P26439 372 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 CRKP46108 304 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 RAB33AQ14088 237 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 SCARF1Q14162 830 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 GRIN2CQ14957 1233 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 MAP3K11Q16584 847 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 SPRED3Q2MJR0 410 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 EFHC2Q5JST6 749 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 PCNX4Q63HM2 1172 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 FIGNL1Q6PIW4 674 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 ANKS3Q6ZW76 656 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 NECAB3Q96P71 396 aaPredicted RBP5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 CEP44Q9C0F1 390 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 UBP1Q9NZI7 540 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 SIRPGQ9P1W8 387 aa5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 MRPL42Q9Y6G3 142 aaKnown RBP5.97□□□□□ -1.45
LSM6P2-201ENST00000552208 MAPTP10636 758 aaKnown RBP5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 RPS26P62854 115 aaKnown RBP5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 FAM160A1Q05DH4 1040 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 FAAP100Q0VG06 881 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 HYAL2Q12891 473 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 RPS26P11Q5JNZ5 115 aaPredicted RBP5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 TPTE2Q6XPS3 522 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 FAM196AQ6ZSG2 479 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 NXPE3Q969Y0 559 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 MRFAP1L1Q96HT8 127 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 SHDQ96IW2 340 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 GAS2L1Q99501 681 aaPredicted RBP5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 LRRC3Q9BY71 257 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 SEC31BQ9NQW1 1179 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 MRVI1Q9Y6F6 885 aa5.96□□□□□ -1.46
LSM6P2-201ENST00000552208 METTL12A8MUP2 240 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 ENPP3O14638 875 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 TRPA1O75762 1119 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 PSAPP07602 524 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 BMP1P13497 986 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 NFKB1P19838 968 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 PLAURQ03405 335 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 RASA3Q14644 834 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 LRP10Q7Z4F1 713 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 NCAPG2Q86XI2 1143 aa5.95□□□□□ -1.46
LSM6P2-201ENST00000552208 TMEM102Q8N9M5 508 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms