RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CYP2E1P05181 493 aaPredicted RBP23.69■■□□□ 1.38
SSH1-209ENST00000551165 SLC5A1P13866 664 aa23.69■■□□□ 1.38
SSH1-209ENST00000551165 ZNF827Q17R98 1081 aa23.69■■□□□ 1.38
SSH1-209ENST00000551165 ZMYM1Q5SVZ6 1142 aa23.69■■□□□ 1.38
SSH1-209ENST00000551165 VPS53Q5VIR6 699 aa23.69■■□□□ 1.38
SSH1-209ENST00000551165 KCNB2Q92953 911 aa23.69■■□□□ 1.38
SSH1-209ENST00000551165 NPHP1O15259 732 aa23.68■■□□□ 1.38
SSH1-209ENST00000551165 TM4SF1P30408 202 aa23.68■■□□□ 1.38
SSH1-209ENST00000551165 CARMIL3Q8ND23 1372 aa23.68■■□□□ 1.38
SSH1-209ENST00000551165 SLC27A2O14975 620 aa23.67■■□□□ 1.38
SSH1-209ENST00000551165 SSFA2P28290 1259 aa23.67■■□□□ 1.38
SSH1-209ENST00000551165 BCAMP50895 628 aa23.67■■□□□ 1.38
SSH1-209ENST00000551165 ARAP2Q8WZ64 1704 aa23.67■■□□□ 1.38
SSH1-209ENST00000551165 FRAT2O75474 233 aaPredicted RBP23.67■■□□□ 1.38
SSH1-209ENST00000551165 ARID4AP29374 1257 aaPredicted RBP23.67■■□□□ 1.38
SSH1-209ENST00000551165 OSBP2Q969R2 916 aa23.67■■□□□ 1.38
SSH1-209ENST00000551165 ZNF512BQ96KM6 892 aaPredicted RBP23.67■■□□□ 1.38
SSH1-209ENST00000551165 PIH1D3Q9NQM4 214 aaKnown RBP23.67■■□□□ 1.38
SSH1-209ENST00000551165 BSDC1Q9NW68 430 aaPredicted RBP23.67■■□□□ 1.38
SSH1-209ENST00000551165 MINPP1Q9UNW1 487 aa23.67■■□□□ 1.38
SSH1-209ENST00000551165 MAST3O60307 1309 aa23.66■■□□□ 1.38
SSH1-209ENST00000551165 M0R2C6 588 aa23.66■■□□□ 1.38
SSH1-209ENST00000551165 LARP6Q9BRS8 491 aaKnown RBP23.66■■□□□ 1.38
SSH1-209ENST00000551165 HMG20BQ9P0W2 317 aa23.66■■□□□ 1.38
SSH1-209ENST00000551165 MYO5AQ9Y4I1 1855 aaKnown RBP23.66■■□□□ 1.38
SSH1-209ENST00000551165 CASTP20810 708 aaKnown RBP23.65■■□□□ 1.38
SSH1-209ENST00000551165 TMX3Q96JJ7 454 aa23.65■■□□□ 1.38
SSH1-209ENST00000551165 JAKMIP1Q96N16 626 aaKnown RBP23.65■■□□□ 1.38
SSH1-209ENST00000551165 HELLSQ9NRZ9 838 aa23.65■■□□□ 1.38
SSH1-209ENST00000551165 CHMP5Q9NZZ3 219 aa23.65■■□□□ 1.38
SSH1-209ENST00000551165 PLSCR1O15162 318 aa23.65■■□□□ 1.38
SSH1-209ENST00000551165 RASGRF1Q13972 1273 aa23.65■■□□□ 1.38
SSH1-209ENST00000551165 PRR5LQ6MZQ0 368 aa23.65■■□□□ 1.38
SSH1-209ENST00000551165 ZGPATQ8N5A5 531 aaKnown RBP23.65■■□□□ 1.38
SSH1-209ENST00000551165 CNBD1Q8NA66 436 aa23.65■■□□□ 1.38
SSH1-209ENST00000551165 RPS8P62241 208 aaKnown RBP23.64■■□□□ 1.38
SSH1-209ENST00000551165 TTC14Q96N46 770 aa23.64■■□□□ 1.38
SSH1-209ENST00000551165 A0A1B0GUL6 1792 aa23.64■■□□□ 1.38
SSH1-209ENST00000551165 A0A0G2JLW4 131 aa23.63■■□□□ 1.37
SSH1-209ENST00000551165 TFCP2L1Q9NZI6 479 aa23.63■■□□□ 1.37
SSH1-209ENST00000551165 DDR1Q08345 913 aa23.63■■□□□ 1.37
SSH1-209ENST00000551165 IQSEC3Q9UPP2 1182 aaPredicted RBP23.63■■□□□ 1.37
SSH1-209ENST00000551165 UQCRFS1P1P0C7P4 283 aa23.62■■□□□ 1.37
SSH1-209ENST00000551165 WASHC4Q2M389 1173 aa23.62■■□□□ 1.37
SSH1-209ENST00000551165 SPATA5Q8NB90 893 aa23.62■■□□□ 1.37
SSH1-209ENST00000551165 PUS7LQ9H0K6 701 aaKnown RBP23.62■■□□□ 1.37
SSH1-209ENST00000551165 SERPINB2P05120 415 aa23.62■■□□□ 1.37
SSH1-209ENST00000551165 GYG1P46976 350 aa23.62■■□□□ 1.37
SSH1-209ENST00000551165 AKT1S1Q96B36 256 aa23.62■■□□□ 1.37
SSH1-209ENST00000551165 ZKSCAN1P17029 563 aaPredicted RBP23.61■■□□□ 1.37
SSH1-209ENST00000551165 KLRK1P26718 216 aa23.61■■□□□ 1.37
SSH1-209ENST00000551165 AK2P54819 239 aa23.61■■□□□ 1.37
SSH1-209ENST00000551165 ZSWIM6Q9HCJ5 1215 aa23.61■■□□□ 1.37
SSH1-209ENST00000551165 IDH1O75874 414 aaKnown RBP23.6■■□□□ 1.37
SSH1-209ENST00000551165 HSPD1P10809 573 aaKnown RBP23.6■■□□□ 1.37
SSH1-209ENST00000551165 COL23A1Q86Y22 540 aaPredicted RBP23.6■■□□□ 1.37
SSH1-209ENST00000551165 WWC3Q9ULE0 1092 aa23.6■■□□□ 1.37
SSH1-209ENST00000551165 FOXP2O15409 715 aa23.59■■□□□ 1.37
SSH1-209ENST00000551165 CYP21A2P08686 494 aa23.59■■□□□ 1.37
SSH1-209ENST00000551165 SLC9C2Q5TAH2 1124 aa23.59■■□□□ 1.37
SSH1-209ENST00000551165 RPAP1Q9BWH6 1393 aaPredicted RBP23.59■■□□□ 1.37
SSH1-209ENST00000551165 RUFY3Q7L099 469 aa23.59■■□□□ 1.37
SSH1-209ENST00000551165 TICAM2Q86XR7 235 aa23.59■■□□□ 1.37
SSH1-209ENST00000551165 TCEANC2Q96MN5 208 aa23.59■■□□□ 1.37
SSH1-209ENST00000551165 MYH7P12883 1935 aa23.59■■□□□ 1.37
SSH1-209ENST00000551165 ADD2P35612 726 aa23.58■■□□□ 1.37
SSH1-209ENST00000551165 MCM2P49736 904 aa23.58■■□□□ 1.37
SSH1-209ENST00000551165 APPBP2Q92624 585 aa23.58■■□□□ 1.37
SSH1-209ENST00000551165 TM6SF1Q9BZW5 370 aa23.58■■□□□ 1.37
SSH1-209ENST00000551165 U3KPZ7 1027 aaPredicted RBP23.58■■□□□ 1.37
SSH1-209ENST00000551165 POLRMTO00411 1230 aaKnown RBP23.57■■□□□ 1.36
SSH1-209ENST00000551165 ZFYP08048 801 aaPredicted RBP23.57■■□□□ 1.36
SSH1-209ENST00000551165 RNF20Q5VTR2 975 aa23.57■■□□□ 1.36
SSH1-209ENST00000551165 UBE4AQ14139 1066 aa23.57■■□□□ 1.36
SSH1-209ENST00000551165 TTF1Q15361 905 aaPredicted RBP23.57■■□□□ 1.36
SSH1-209ENST00000551165 PDRG1Q9NUG6 133 aa23.57■■□□□ 1.36
SSH1-209ENST00000551165 CYP46A1Q9Y6A2 500 aa23.57■■□□□ 1.36
SSH1-209ENST00000551165 TNS1Q9HBL0 1735 aaKnown RBP23.57■■□□□ 1.36
SSH1-209ENST00000551165 PKP1Q13835 747 aa23.56■■□□□ 1.36
SSH1-209ENST00000551165 TTLL5Q6EMB2 1281 aa23.56■■□□□ 1.36
SSH1-209ENST00000551165 DSCC1Q9BVC3 393 aa23.56■■□□□ 1.36
SSH1-209ENST00000551165 PDE6AP16499 860 aa23.56■■□□□ 1.36
SSH1-209ENST00000551165 CUL4AQ13619 759 aa23.56■■□□□ 1.36
SSH1-209ENST00000551165 ZNF532Q9HCE3 1301 aa23.56■■□□□ 1.36
SSH1-209ENST00000551165 LARGE1O95461 756 aa23.55■■□□□ 1.36
SSH1-209ENST00000551165 TSGA10IPQ3SY00 556 aa23.55■■□□□ 1.36
SSH1-209ENST00000551165 STOX1Q6ZVD7 989 aa23.55■■□□□ 1.36
SSH1-209ENST00000551165 FAM84BQ96KN1 310 aaPredicted RBP23.55■■□□□ 1.36
SSH1-209ENST00000551165 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.55■■□□□ 1.36
SSH1-209ENST00000551165 TCRBV5S4A2TA0A5A2 114 aa23.55■■□□□ 1.36
SSH1-209ENST00000551165 ZNF804BA4D1E1 1349 aa23.55■■□□□ 1.36
SSH1-209ENST00000551165 DTNBO60941 627 aa23.55■■□□□ 1.36
SSH1-209ENST00000551165 COL1A1P02452 1464 aaPredicted RBP23.55■■□□□ 1.36
SSH1-209ENST00000551165 LRRFIP1Q32MZ4 808 aaKnown RBP23.55■■□□□ 1.36
SSH1-209ENST00000551165 CIZ1Q9ULV3 898 aaPredicted RBP23.55■■□□□ 1.36
SSH1-209ENST00000551165 GPAA1O43292 621 aa23.54■■□□□ 1.36
SSH1-209ENST00000551165 GRAPQ13588 217 aa23.54■■□□□ 1.36
SSH1-209ENST00000551165 TXNRD3Q86VQ6 643 aa23.54■■□□□ 1.36
SSH1-209ENST00000551165 GRAPLQ8TC17 118 aaPredicted RBP23.54■■□□□ 1.36
SSH1-209ENST00000551165 TNPO1Q92973 898 aaKnown RBP23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms