RNA–Protein interactions for RNA: ENST00000549757.5

SMARCC2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,062 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-207ENST00000549757 NIFKQ9BYG3 293 aaKnown RBP7.53□□□□□ -1.2
SMARCC2-207ENST00000549757 CNTNAP3Q9BZ76 1288 aa7.53□□□□□ -1.2
SMARCC2-207ENST00000549757 STK26Q9P289 416 aa7.53□□□□□ -1.2
SMARCC2-207ENST00000549757 MARF1Q9Y4F3 1742 aaKnown RBP7.52□□□□□ -1.2
SMARCC2-207ENST00000549757 MYOM2P54296 1465 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 ANKRD62A6NC57 917 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 ATG7O95352 703 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 ATP4AP20648 1035 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 RASA1P20936 1047 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 ZC3H6P61129 1189 aaKnown RBP7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 PTK7Q13308 1070 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 TAF7LQ5H9L4 462 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 TNS4Q8IZW8 715 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 ZDHHC1Q8WTX9 485 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 ZNF594Q96JF6 807 aaPredicted RBP7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 PSMD1Q99460 953 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 HIRIP3Q9BW71 556 aaPredicted RBP7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 GPAMQ9HCL2 828 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 PRAG1Q86YV5 1406 aa7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 RRBP1Q9P2E9 1410 aaKnown RBP7.52□□□□□ -1.21
SMARCC2-207ENST00000549757 PXDNQ92626 1479 aa7.51□□□□□ -1.21
SMARCC2-207ENST00000549757 FAM196BA6NMK8 535 aa7.51□□□□□ -1.21
SMARCC2-207ENST00000549757 RGL3Q3MIN7 710 aa7.51□□□□□ -1.21
SMARCC2-207ENST00000549757 ZSCAN1Q8NBB4 408 aa7.51□□□□□ -1.21
SMARCC2-207ENST00000549757 NUCKS1Q9H1E3 243 aaKnown RBP7.51□□□□□ -1.21
SMARCC2-207ENST00000549757 CRISPLD1Q9H336 500 aa7.51□□□□□ -1.21
SMARCC2-207ENST00000549757 CCDC144AA2RUR9 1427 aa7.51□□□□□ -1.21
SMARCC2-207ENST00000549757 SFI1A8K8P3 1242 aa7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 GPR25O00155 361 aa7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 VAMP1P23763 118 aa7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 SF3B2Q13435 895 aaKnown RBP7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 LBRQ14739 615 aaKnown RBP7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 B4GALNT3Q6L9W6 998 aa7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 SLC9A9Q8IVB4 645 aa7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 GTPBP3Q969Y2 492 aaKnown RBP7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 BCL2L13Q9BXK5 485 aa7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 RUBCNLQ9H714 662 aa7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 BRPF3Q9ULD4 1205 aa7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 KIF1AQ12756 1690 aa7.5□□□□□ -1.21
SMARCC2-207ENST00000549757 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 BCL9LQ86UU0 1499 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L15C9J2P7 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L10C9JJH3 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L13C9JLJ4 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L12C9JPN9 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L11C9JVI0 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L21D6R901 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L18D6R9N7 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L22D6RA61 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L17D6RBQ6 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L19D6RCP7 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L20D6RJB6 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 SLURP2P0DP57 97 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP17L24Q0WX57 530 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 TEAD4Q15561 434 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 TBCELQ5QJ74 424 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 WAPLQ7Z5K2 1190 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 TSEN2Q8NCE0 465 aaKnown RBP7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 C1orf216Q8TAB5 229 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 ZDHHC3Q9NYG2 299 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 CABP1Q9NZU7 370 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 BCCIPQ9P287 314 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 KNDC1Q76NI1 1749 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 ADGRF5Q8IZF2 1346 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 USP32Q8NFA0 1604 aa7.49□□□□□ -1.21
SMARCC2-207ENST00000549757 ANKRD30BQ9BXX2 1392 aa7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 TXLNAP40222 546 aa7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 BLMP54132 1417 aaPredicted RBP7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 SF3A1Q15459 793 aaKnown RBP7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 TMEM132EQ6IEE7 984 aa7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 LARP1Q6PKG0 1096 aaKnown RBP7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 TICAM2Q86XR7 235 aa7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 UNC5CLQ8IV45 518 aa7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 CCER1Q8TC90 406 aaPredicted RBP7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 TSPAN10Q9H1Z9 355 aaPredicted RBP7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 NDFIP2Q9NV92 336 aa7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 FMN2Q9NZ56 1722 aa7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 STK17AQ9UEE5 414 aa7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 RALGAPBQ86X10 1494 aa7.48□□□□□ -1.21
SMARCC2-207ENST00000549757 PLEKHH1Q9ULM0 1364 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 IFT172Q9UG01 1749 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 GLI3P10071 1580 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 TECPR2O15040 1411 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 TNS3Q68CZ2 1445 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 EML1O00423 815 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 C21orf2O43822 256 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 NOS2P35228 1153 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 SEC13P55735 322 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 DPYDQ12882 1025 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 SH3PXD2AQ5TCZ1 1133 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 GIMAP6Q6P9H5 292 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 KRT28Q7Z3Y7 464 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 ANKMY2Q8IV38 441 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 GIPC2Q8TF65 315 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 L3MBTL2Q969R5 705 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 PARP3Q9Y6F1 533 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 SPATA31A3Q5VYP0 1347 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 SLIT2O94813 1529 aa7.47□□□□□ -1.21
SMARCC2-207ENST00000549757 YTHDC2Q9H6S0 1430 aaKnown RBP7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms