RNA–Protein interactions for RNA: ENST00000548159.5

CNOT2-209, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 1 (best)

Gene CNOT2, Length 2,549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-209ENST00000548159 SCARF1Q14162 830 aa18.94■□□□□ 0.62
CNOT2-209ENST00000548159 RBM43Q6ZSC3 357 aaKnown RBP18.94■□□□□ 0.62
CNOT2-209ENST00000548159 FAM89AQ96GI7 184 aa18.94■□□□□ 0.62
CNOT2-209ENST00000548159 AGXT2Q9BYV1 514 aa18.94■□□□□ 0.62
CNOT2-209ENST00000548159 HAND2P61296 217 aa18.94■□□□□ 0.62
CNOT2-209ENST00000548159 KLHL34Q8N239 644 aa18.94■□□□□ 0.62
CNOT2-209ENST00000548159 ZSCAN16Q9H4T2 348 aaPredicted RBP18.94■□□□□ 0.62
CNOT2-209ENST00000548159 CEP126Q9P2H0 1117 aa18.94■□□□□ 0.62
CNOT2-209ENST00000548159 NUP188Q5SRE5 1749 aa18.93■□□□□ 0.62
CNOT2-209ENST00000548159 FOXP2O15409 715 aa18.93■□□□□ 0.62
CNOT2-209ENST00000548159 PDIA3P30101 505 aaKnown RBP18.93■□□□□ 0.62
CNOT2-209ENST00000548159 PI16Q6UXB8 463 aa18.93■□□□□ 0.62
CNOT2-209ENST00000548159 DNAJC25Q9H1X3 360 aa18.93■□□□□ 0.62
CNOT2-209ENST00000548159 PLEKHG2Q9H7P9 1386 aa18.93■□□□□ 0.62
CNOT2-209ENST00000548159 IL2RBP14784 551 aa18.93■□□□□ 0.62
CNOT2-209ENST00000548159 LLPHQ9BRT6 129 aaKnown RBP18.93■□□□□ 0.62
CNOT2-209ENST00000548159 NKX1-1Q15270 411 aaPredicted RBP18.92■□□□□ 0.62
CNOT2-209ENST00000548159 CCDC57Q2TAC2 916 aa18.92■□□□□ 0.62
CNOT2-209ENST00000548159 TSC1Q92574 1164 aa18.92■□□□□ 0.62
CNOT2-209ENST00000548159 XAGE2Q96GT9 111 aa18.92■□□□□ 0.62
CNOT2-209ENST00000548159 USP28Q96RU2 1077 aa18.92■□□□□ 0.62
CNOT2-209ENST00000548159 ISCA1Q9BUE6 129 aa18.92■□□□□ 0.62
CNOT2-209ENST00000548159 CIAO1O76071 339 aa18.92■□□□□ 0.62
CNOT2-209ENST00000548159 KIAA1524Q8TCG1 905 aa18.92■□□□□ 0.62
CNOT2-209ENST00000548159 PDCL3Q9H2J4 239 aa18.92■□□□□ 0.62
CNOT2-209ENST00000548159 CFAP45Q9UL16 551 aa18.92■□□□□ 0.62
CNOT2-209ENST00000548159 A0A087WWV3 80 aa18.91■□□□□ 0.62
CNOT2-209ENST00000548159 TCIRG1Q13488 830 aa18.91■□□□□ 0.62
CNOT2-209ENST00000548159 SPTLC3Q9NUV7 552 aa18.91■□□□□ 0.62
CNOT2-209ENST00000548159 NRBP1Q9UHY1 535 aa18.91■□□□□ 0.62
CNOT2-209ENST00000548159 PARP4Q9UKK3 1724 aaKnown RBP18.91■□□□□ 0.62
CNOT2-209ENST00000548159 PTGS1P23219 599 aa18.91■□□□□ 0.62
CNOT2-209ENST00000548159 WASHC4Q2M389 1173 aa18.91■□□□□ 0.62
CNOT2-209ENST00000548159 GORABQ5T7V8 394 aa18.91■□□□□ 0.62
CNOT2-209ENST00000548159 ILDR1Q86SU0 546 aaPredicted RBP18.91■□□□□ 0.62
CNOT2-209ENST00000548159 GOLPH3LQ9H4A5 285 aa18.91■□□□□ 0.62
CNOT2-209ENST00000548159 ATG3Q9NT62 314 aa18.91■□□□□ 0.62
CNOT2-209ENST00000548159 UBR2Q8IWV8 1755 aa18.9■□□□□ 0.62
CNOT2-209ENST00000548159 FDPSP14324 419 aaKnown RBP18.9■□□□□ 0.62
CNOT2-209ENST00000548159 ZNF165P49910 485 aa18.9■□□□□ 0.62
CNOT2-209ENST00000548159 NAA16Q6N069 864 aaPredicted RBP18.9■□□□□ 0.62
CNOT2-209ENST00000548159 ASAP1Q9ULH1 1129 aa18.9■□□□□ 0.62
CNOT2-209ENST00000548159 COL5A2P05997 1499 aaPredicted RBP18.9■□□□□ 0.62
CNOT2-209ENST00000548159 SALL1Q9NSC2 1324 aa18.9■□□□□ 0.62
CNOT2-209ENST00000548159 TTC39AQ5SRH9 613 aa18.9■□□□□ 0.62
CNOT2-209ENST00000548159 OTUD7BQ6GQQ9 843 aa18.9■□□□□ 0.62
CNOT2-209ENST00000548159 RAB11FIP4Q86YS3 637 aa18.9■□□□□ 0.62
CNOT2-209ENST00000548159 RCOR1Q9UKL0 485 aa18.9■□□□□ 0.62
CNOT2-209ENST00000548159 ZAP70P43403 619 aa18.89■□□□□ 0.61
CNOT2-209ENST00000548159 CCDC158Q5M9N0 1113 aa18.89■□□□□ 0.61
CNOT2-209ENST00000548159 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
CNOT2-209ENST00000548159 PUS7LQ9H0K6 701 aaKnown RBP18.89■□□□□ 0.61
CNOT2-209ENST00000548159 DYNC1I1O14576 645 aa18.89■□□□□ 0.61
CNOT2-209ENST00000548159 FGAP02671 866 aa18.89■□□□□ 0.61
CNOT2-209ENST00000548159 HMGN5P82970 282 aaKnown RBP18.89■□□□□ 0.61
CNOT2-209ENST00000548159 CCAR1Q8IX12 1150 aaKnown RBP18.89■□□□□ 0.61
CNOT2-209ENST00000548159 LRMPQ12912 555 aa18.88■□□□□ 0.61
CNOT2-209ENST00000548159 CCDC186Q7Z3E2 898 aa18.88■□□□□ 0.61
CNOT2-209ENST00000548159 ERCC4Q92889 916 aaPredicted RBP18.88■□□□□ 0.61
CNOT2-209ENST00000548159 TRIM5Q9C035 493 aa18.88■□□□□ 0.61
CNOT2-209ENST00000548159 FAM177BA6PVY3 158 aa18.88■□□□□ 0.61
CNOT2-209ENST00000548159 ZNF274Q96GC6 653 aaPredicted RBP18.88■□□□□ 0.61
CNOT2-209ENST00000548159 CARD10Q9BWT7 1032 aa18.88■□□□□ 0.61
CNOT2-209ENST00000548159 GJB4Q9NTQ9 266 aa18.88■□□□□ 0.61
CNOT2-209ENST00000548159 GPTP24298 496 aa18.87■□□□□ 0.61
CNOT2-209ENST00000548159 SNW1Q13573 536 aaKnown RBP18.87■□□□□ 0.61
CNOT2-209ENST00000548159 MYRIPQ8NFW9 859 aa18.87■□□□□ 0.61
CNOT2-209ENST00000548159 C11orf57Q6ZUT1 292 aaPredicted RBP18.87■□□□□ 0.61
CNOT2-209ENST00000548159 TMOD3Q9NYL9 352 aa18.87■□□□□ 0.61
CNOT2-209ENST00000548159 CARMIL3Q8ND23 1372 aa18.86■□□□□ 0.61
CNOT2-209ENST00000548159 HLFQ16534 295 aa18.86■□□□□ 0.61
CNOT2-209ENST00000548159 TAF7LQ5H9L4 462 aa18.86■□□□□ 0.61
CNOT2-209ENST00000548159 TDRD7Q8NHU6 1098 aaKnown RBP18.86■□□□□ 0.61
CNOT2-209ENST00000548159 ARID3AQ99856 593 aa18.86■□□□□ 0.61
CNOT2-209ENST00000548159 DENND2AQ9ULE3 1009 aa18.86■□□□□ 0.61
CNOT2-209ENST00000548159 TNS2Q63HR2 1409 aa18.86■□□□□ 0.61
CNOT2-209ENST00000548159 ZNF75DP51815 510 aa18.85■□□□□ 0.61
CNOT2-209ENST00000548159 EVA1CP58658 441 aa18.85■□□□□ 0.61
CNOT2-209ENST00000548159 DRC7Q8IY82 874 aa18.85■□□□□ 0.61
CNOT2-209ENST00000548159 NKX2-3Q8TAU0 364 aa18.85■□□□□ 0.61
CNOT2-209ENST00000548159 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.85■□□□□ 0.61
CNOT2-209ENST00000548159 PIGBQ92521 554 aa18.85■□□□□ 0.61
CNOT2-209ENST00000548159 GOLGA6L6A8MZA4 724 aa18.85■□□□□ 0.61
CNOT2-209ENST00000548159 PLA2G4DQ86XP0 818 aa18.85■□□□□ 0.61
CNOT2-209ENST00000548159 ME1P48163 572 aa18.84■□□□□ 0.61
CNOT2-209ENST00000548159 IFIT5Q13325 482 aaKnown RBP18.84■□□□□ 0.61
CNOT2-209ENST00000548159 AKAP2Q9Y2D5 859 aa18.84■□□□□ 0.61
CNOT2-209ENST00000548159 NWD2Q9ULI1 1742 aa18.84■□□□□ 0.61
CNOT2-209ENST00000548159 PCCAP05165 728 aaPredicted RBP18.84■□□□□ 0.61
CNOT2-209ENST00000548159 CSF1RP07333 972 aa18.84■□□□□ 0.61
CNOT2-209ENST00000548159 IQCB1Q15051 598 aa18.84■□□□□ 0.61
CNOT2-209ENST00000548159 POLR3DP05423 398 aaPredicted RBP18.83■□□□□ 0.61
CNOT2-209ENST00000548159 ANTXR2P58335 489 aa18.83■□□□□ 0.61
CNOT2-209ENST00000548159 TRIM28Q13263 835 aaKnown RBP18.83■□□□□ 0.61
CNOT2-209ENST00000548159 IMMTQ16891 758 aaKnown RBP18.83■□□□□ 0.61
CNOT2-209ENST00000548159 ZBTB38Q8NAP3 1195 aaPredicted RBP18.83■□□□□ 0.61
CNOT2-209ENST00000548159 ENGASEQ8NFI3 743 aa18.83■□□□□ 0.61
CNOT2-209ENST00000548159 GREM2Q9H772 168 aa18.83■□□□□ 0.61
CNOT2-209ENST00000548159 HPS5Q9UPZ3 1129 aa18.83■□□□□ 0.61
CNOT2-209ENST00000548159 SOS2Q07890 1332 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms