RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 TJAP1Q5JTD0 557 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 FAM109BQ6ICB4 259 aaPredicted RBP9.46□□□□□ -0.9
LDHA-223ENST00000545215 PRR5LQ6MZQ0 368 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 NUDT18Q6ZVK8 323 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 NBPF11Q86T75 865 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 NUTM1Q86Y26 1132 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 STAC3Q96MF2 364 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 PSMD1Q99460 953 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 TMEM134Q9H6X4 195 aa9.46□□□□□ -0.9
LDHA-223ENST00000545215 CENPJQ9HC77 1338 aaPredicted RBP9.45□□□□□ -0.9
LDHA-223ENST00000545215 DDX11L8A8MPP1 907 aa9.45□□□□□ -0.9
LDHA-223ENST00000545215 POTEB2H3BUK9 544 aa9.45□□□□□ -0.9
LDHA-223ENST00000545215 UBE2Q1Q7Z7E8 422 aa9.45□□□□□ -0.9
LDHA-223ENST00000545215 DCAF11Q8TEB1 546 aa9.45□□□□□ -0.9
LDHA-223ENST00000545215 GDF15Q99988 308 aa9.45□□□□□ -0.9
LDHA-223ENST00000545215 SOS1Q07889 1333 aaPredicted RBP9.44□□□□□ -0.9
LDHA-223ENST00000545215 NBPF26B4DH59 902 aa9.44□□□□□ -0.9
LDHA-223ENST00000545215 QPCTQ16769 361 aa9.44□□□□□ -0.9
LDHA-223ENST00000545215 SAMD7Q7Z3H4 446 aa9.44□□□□□ -0.9
LDHA-223ENST00000545215 MAFAQ8NHW3 353 aaPredicted RBP9.44□□□□□ -0.9
LDHA-223ENST00000545215 NECTIN2Q92692 538 aa9.44□□□□□ -0.9
LDHA-223ENST00000545215 TATDN2Q93075 761 aa9.44□□□□□ -0.9
LDHA-223ENST00000545215 MPHOSPH9Q99550 1183 aa9.44□□□□□ -0.9
LDHA-223ENST00000545215 C1QTNF1Q9BXJ1 281 aa9.44□□□□□ -0.9
LDHA-223ENST00000545215 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
LDHA-223ENST00000545215 SPG7Q9UQ90 795 aa9.44□□□□□ -0.9
LDHA-223ENST00000545215 MRC1P22897 1456 aa9.43□□□□□ -0.9
LDHA-223ENST00000545215 SBNO2Q9Y2G9 1366 aa9.43□□□□□ -0.9
LDHA-223ENST00000545215 TRIM6-TRIM34B2RNG4 842 aa9.43□□□□□ -0.9
LDHA-223ENST00000545215 PTPREP23469 700 aa9.43□□□□□ -0.9
LDHA-223ENST00000545215 KRT26Q7Z3Y9 468 aa9.43□□□□□ -0.9
LDHA-223ENST00000545215 TRPM4Q8TD43 1214 aa9.43□□□□□ -0.9
LDHA-223ENST00000545215 COL26A1Q96A83 441 aa9.43□□□□□ -0.9
LDHA-223ENST00000545215 PCDHB15Q9Y5E8 787 aa9.43□□□□□ -0.9
LDHA-223ENST00000545215 PTCD1O75127 700 aaKnown RBP9.42□□□□□ -0.9
LDHA-223ENST00000545215 NDUFV2P19404 249 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 GMPSP49915 693 aaPredicted RBP9.42□□□□□ -0.9
LDHA-223ENST00000545215 MRE11P49959 708 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 CSPP1Q1MSJ5 1256 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 SLC9C1Q4G0N8 1177 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 SHISA4Q96DD7 197 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 ERO1AQ96HE7 468 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 TRAIPQ9BWF2 469 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 EFCC1Q9HA90 598 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 PNMA3Q9UL41 463 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 CDHR2Q9BYE9 1310 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 IRS2Q9Y4H2 1338 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 ANKRD26Q9UPS8 1709 aa9.42□□□□□ -0.9
LDHA-223ENST00000545215 ERVV-2B6SEH9 535 aa9.41□□□□□ -0.9
LDHA-223ENST00000545215 PHKG2P15735 406 aa9.41□□□□□ -0.9
LDHA-223ENST00000545215 FOXK2Q01167 660 aa9.41□□□□□ -0.9
LDHA-223ENST00000545215 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
LDHA-223ENST00000545215 SNED1Q8TER0 1413 aa9.41□□□□□ -0.9
LDHA-223ENST00000545215 EVC2Q86UK5 1308 aa9.41□□□□□ -0.9
LDHA-223ENST00000545215 NPR1P16066 1061 aa9.4□□□□□ -0.9
LDHA-223ENST00000545215 SREBF2Q12772 1141 aa9.4□□□□□ -0.9
LDHA-223ENST00000545215 TBC1D9BQ66K14 1250 aa9.4□□□□□ -0.9
LDHA-223ENST00000545215 PACS2Q86VP3 889 aa9.4□□□□□ -0.9
LDHA-223ENST00000545215 IFNL2Q8IZJ0 200 aa9.4□□□□□ -0.9
LDHA-223ENST00000545215 ZNF710Q8N1W2 664 aa9.4□□□□□ -0.9
LDHA-223ENST00000545215 LARGE2Q8N3Y3 721 aa9.4□□□□□ -0.9
LDHA-223ENST00000545215 COL15A1P39059 1388 aa9.4□□□□□ -0.91
LDHA-223ENST00000545215 ZNF609O15014 1411 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 ADM5C9JUS6 153 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 AP1G2O75843 785 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 FBLN1P23142 703 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 CXCL9Q07325 125 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 WWC1Q8IX03 1113 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 TDHQ8IZJ6 230 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 CD99L2Q8TCZ2 262 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 TBC1D2BQ9UPU7 963 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 RTL1A6NKG5 1358 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 NPC1L1Q9UHC9 1359 aa9.39□□□□□ -0.91
LDHA-223ENST00000545215 KLRG2A4D1S0 409 aaPredicted RBP9.38□□□□□ -0.91
LDHA-223ENST00000545215 KDM4AO75164 1064 aa9.38□□□□□ -0.91
LDHA-223ENST00000545215 MYCP01106 439 aaPredicted RBP9.38□□□□□ -0.91
LDHA-223ENST00000545215 FKBP1BP68106 108 aa9.38□□□□□ -0.91
LDHA-223ENST00000545215 NIM1KQ8IY84 436 aa9.38□□□□□ -0.91
LDHA-223ENST00000545215 CNBD1Q8NA66 436 aa9.38□□□□□ -0.91
LDHA-223ENST00000545215 FAM161BQ96MY7 647 aa9.38□□□□□ -0.91
LDHA-223ENST00000545215 CDX2Q99626 313 aaPredicted RBP9.38□□□□□ -0.91
LDHA-223ENST00000545215 PRM3Q9NNZ6 103 aa9.38□□□□□ -0.91
LDHA-223ENST00000545215 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
LDHA-223ENST00000545215 TJP1Q07157 1748 aa9.37□□□□□ -0.91
LDHA-223ENST00000545215 USP17L8P0C7I0 530 aa9.37□□□□□ -0.91
LDHA-223ENST00000545215 ABL2P42684 1182 aa9.37□□□□□ -0.91
LDHA-223ENST00000545215 ST5P78524 1137 aa9.37□□□□□ -0.91
LDHA-223ENST00000545215 RDH13Q8NBN7 331 aa9.37□□□□□ -0.91
LDHA-223ENST00000545215 DCPSQ96C86 337 aaKnown RBP9.37□□□□□ -0.91
LDHA-223ENST00000545215 LRFN3Q9BTN0 628 aa9.37□□□□□ -0.91
LDHA-223ENST00000545215 CNOT7Q9UIV1 285 aaKnown RBP9.37□□□□□ -0.91
LDHA-223ENST00000545215 KDM3BQ7LBC6 1761 aa9.37□□□□□ -0.91
LDHA-223ENST00000545215 POM121CA8CG34 1229 aa9.36□□□□□ -0.91
LDHA-223ENST00000545215 SMAPO00193 183 aa9.36□□□□□ -0.91
LDHA-223ENST00000545215 USP46P62068 366 aa9.36□□□□□ -0.91
LDHA-223ENST00000545215 CAP1Q01518 475 aa9.36□□□□□ -0.91
LDHA-223ENST00000545215 NKX2-3Q8TAU0 364 aa9.36□□□□□ -0.91
LDHA-223ENST00000545215 PCGF6Q9BYE7 350 aa9.36□□□□□ -0.91
LDHA-223ENST00000545215 PTCH2Q9Y6C5 1203 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 145.5 ms