RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 TXNRD3Q86VQ6 643 aa16.58■□□□□ 0.24
DDX55-213ENST00000545042 FTSJ3Q8IY81 847 aaKnown RBP16.58■□□□□ 0.24
DDX55-213ENST00000545042 FBXW7Q969H0 707 aa16.58■□□□□ 0.24
DDX55-213ENST00000545042 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
DDX55-213ENST00000545042 MEIS3Q99687 375 aa16.58■□□□□ 0.24
DDX55-213ENST00000545042 PUS3Q9BZE2 481 aaKnown RBP16.58■□□□□ 0.24
DDX55-213ENST00000545042 RIPOR2Q9Y4F9 1068 aa16.58■□□□□ 0.24
DDX55-213ENST00000545042 LRRFIP2Q9Y608 721 aaKnown RBP16.58■□□□□ 0.24
DDX55-213ENST00000545042 ADAMTSL1Q8N6G6 1762 aa16.58■□□□□ 0.24
DDX55-213ENST00000545042 SCN9AQ15858 1988 aa16.57■□□□□ 0.24
DDX55-213ENST00000545042 SNAP23O00161 211 aa16.57■□□□□ 0.24
DDX55-213ENST00000545042 KLRK1P26718 216 aa16.57■□□□□ 0.24
DDX55-213ENST00000545042 UBE4AQ14139 1066 aa16.57■□□□□ 0.24
DDX55-213ENST00000545042 METTL24Q5JXM2 366 aa16.57■□□□□ 0.24
DDX55-213ENST00000545042 STRIP1Q5VSL9 837 aa16.57■□□□□ 0.24
DDX55-213ENST00000545042 ZC3H15Q8WU90 426 aaKnown RBP16.57■□□□□ 0.24
DDX55-213ENST00000545042 ZNF609O15014 1411 aa16.56■□□□□ 0.24
DDX55-213ENST00000545042 MYO3BQ8WXR4 1341 aa16.56■□□□□ 0.24
DDX55-213ENST00000545042 PASKQ96RG2 1323 aa16.56■□□□□ 0.24
DDX55-213ENST00000545042 ITGBL1O95965 494 aaPredicted RBP16.56■□□□□ 0.24
DDX55-213ENST00000545042 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
DDX55-213ENST00000545042 TRPM4Q8TD43 1214 aa16.56■□□□□ 0.24
DDX55-213ENST00000545042 CD209Q9NNX6 404 aa16.56■□□□□ 0.24
DDX55-213ENST00000545042 SHTN1A0MZ66 631 aa16.55■□□□□ 0.24
DDX55-213ENST00000545042 USP17L8P0C7I0 530 aa16.55■□□□□ 0.24
DDX55-213ENST00000545042 HTRA3P83110 453 aa16.55■□□□□ 0.24
DDX55-213ENST00000545042 TBC1D10BQ4KMP7 808 aaPredicted RBP16.55■□□□□ 0.24
DDX55-213ENST00000545042 LRRC24Q50LG9 513 aa16.55■□□□□ 0.24
DDX55-213ENST00000545042 RBM26Q5T8P6 1007 aaKnown RBP16.55■□□□□ 0.24
DDX55-213ENST00000545042 SAMD7Q7Z3H4 446 aa16.55■□□□□ 0.24
DDX55-213ENST00000545042 KLHDC4Q8TBB5 520 aa16.55■□□□□ 0.24
DDX55-213ENST00000545042 CREBZFQ9NS37 354 aa16.55■□□□□ 0.24
DDX55-213ENST00000545042 PSME4Q14997 1843 aa16.54■□□□□ 0.24
DDX55-213ENST00000545042 A0A1B0GUL6 1792 aa16.54■□□□□ 0.24
DDX55-213ENST00000545042 EYA2O00167 538 aa16.54■□□□□ 0.24
DDX55-213ENST00000545042 KIF4BQ2VIQ3 1234 aa16.54■□□□□ 0.24
DDX55-213ENST00000545042 DACT2Q5SW24 774 aa16.54■□□□□ 0.24
DDX55-213ENST00000545042 DZIP1LQ8IYY4 767 aaKnown RBP16.54■□□□□ 0.24
DDX55-213ENST00000545042 OGFOD1Q8N543 542 aa16.54■□□□□ 0.24
DDX55-213ENST00000545042 TMEM57Q8N5G2 664 aa16.54■□□□□ 0.24
DDX55-213ENST00000545042 PGAP2Q9UHJ9 254 aa16.54■□□□□ 0.24
DDX55-213ENST00000545042 FBXO3Q9UK99 471 aa16.54■□□□□ 0.24
DDX55-213ENST00000545042 TNNQ9UQP3 1299 aa16.54■□□□□ 0.24
DDX55-213ENST00000545042 IRS2Q9Y4H2 1338 aa16.53■□□□□ 0.24
DDX55-213ENST00000545042 TMEM88BA6NKF7 163 aa16.53■□□□□ 0.24
DDX55-213ENST00000545042 PDE8BO95263 885 aa16.53■□□□□ 0.24
DDX55-213ENST00000545042 GNAI2P04899 355 aa16.53■□□□□ 0.24
DDX55-213ENST00000545042 RFX5P48382 616 aaPredicted RBP16.53■□□□□ 0.24
DDX55-213ENST00000545042 MMP14P50281 582 aa16.53■□□□□ 0.24
DDX55-213ENST00000545042 HIRAP54198 1017 aaPredicted RBP16.53■□□□□ 0.24
DDX55-213ENST00000545042 ZNF280AP59817 542 aaPredicted RBP16.53■□□□□ 0.24
DDX55-213ENST00000545042 GTF2IP78347 998 aa16.53■□□□□ 0.24
DDX55-213ENST00000545042 PTPN12Q05209 780 aaKnown RBP16.53■□□□□ 0.24
DDX55-213ENST00000545042 VPS37DQ86XT2 251 aa16.53■□□□□ 0.24
DDX55-213ENST00000545042 GMLQ99445 158 aa16.53■□□□□ 0.24
DDX55-213ENST00000545042 MS4A1P11836 297 aa16.52■□□□□ 0.24
DDX55-213ENST00000545042 IL1R1P14778 569 aa16.52■□□□□ 0.24
DDX55-213ENST00000545042 HIBADHP31937 336 aaKnown RBP16.52■□□□□ 0.24
DDX55-213ENST00000545042 CAVIN4Q5BKX8 364 aa16.52■□□□□ 0.24
DDX55-213ENST00000545042 CDC37L1Q7L3B6 337 aa16.52■□□□□ 0.24
DDX55-213ENST00000545042 DNAJC5GQ8N7S2 189 aa16.52■□□□□ 0.24
DDX55-213ENST00000545042 DCPSQ96C86 337 aaKnown RBP16.52■□□□□ 0.24
DDX55-213ENST00000545042 KLRG1Q96E93 195 aa16.52■□□□□ 0.24
DDX55-213ENST00000545042 CIAO1O76071 339 aa16.51■□□□□ 0.23
DDX55-213ENST00000545042 IFIT1P09914 478 aaKnown RBP16.51■□□□□ 0.23
DDX55-213ENST00000545042 PUM3Q15397 648 aaKnown RBP16.51■□□□□ 0.23
DDX55-213ENST00000545042 ITPRIPQ8IWB1 547 aa16.51■□□□□ 0.23
DDX55-213ENST00000545042 VGLL2Q8N8G2 317 aa16.51■□□□□ 0.23
DDX55-213ENST00000545042 SIL1Q9H173 461 aa16.51■□□□□ 0.23
DDX55-213ENST00000545042 MYOZ2Q9NPC6 264 aa16.51■□□□□ 0.23
DDX55-213ENST00000545042 HDAC9Q9UKV0 1011 aa16.51■□□□□ 0.23
DDX55-213ENST00000545042 SRGAP3O43295 1099 aa16.5■□□□□ 0.23
DDX55-213ENST00000545042 EGFRP00533 1210 aa16.5■□□□□ 0.23
DDX55-213ENST00000545042 GYG1P46976 350 aa16.5■□□□□ 0.23
DDX55-213ENST00000545042 MTX1Q13505 466 aa16.5■□□□□ 0.23
DDX55-213ENST00000545042 MXD3Q9BW11 206 aa16.5■□□□□ 0.23
DDX55-213ENST00000545042 GLIS2Q9BZE0 524 aaPredicted RBP16.5■□□□□ 0.23
DDX55-213ENST00000545042 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
DDX55-213ENST00000545042 TRAF5O00463 557 aa16.49■□□□□ 0.23
DDX55-213ENST00000545042 FRAT2O75474 233 aaPredicted RBP16.49■□□□□ 0.23
DDX55-213ENST00000545042 SASH1O94885 1247 aa16.49■□□□□ 0.23
DDX55-213ENST00000545042 SLC5A1P13866 664 aa16.49■□□□□ 0.23
DDX55-213ENST00000545042 IL15P40933 162 aaPredicted RBP16.49■□□□□ 0.23
DDX55-213ENST00000545042 FKBP1AP62942 108 aaKnown RBP16.49■□□□□ 0.23
DDX55-213ENST00000545042 KRT26Q7Z3Y9 468 aa16.49■□□□□ 0.23
DDX55-213ENST00000545042 KIAA0825Q8IV33 1275 aa16.49■□□□□ 0.23
DDX55-213ENST00000545042 FAM84BQ96KN1 310 aaPredicted RBP16.49■□□□□ 0.23
DDX55-213ENST00000545042 COPRSQ9NQ92 184 aa16.49■□□□□ 0.23
DDX55-213ENST00000545042 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
DDX55-213ENST00000545042 SCARF1Q14162 830 aa16.48■□□□□ 0.23
DDX55-213ENST00000545042 ATG9AQ7Z3C6 839 aa16.48■□□□□ 0.23
DDX55-213ENST00000545042 FBXO33Q7Z6M2 555 aa16.48■□□□□ 0.23
DDX55-213ENST00000545042 USP48Q86UV5 1035 aa16.48■□□□□ 0.23
DDX55-213ENST00000545042 SULF1Q8IWU6 871 aa16.48■□□□□ 0.23
DDX55-213ENST00000545042 TDRD7Q8NHU6 1098 aaKnown RBP16.48■□□□□ 0.23
DDX55-213ENST00000545042 LPIN2Q92539 896 aa16.48■□□□□ 0.23
DDX55-213ENST00000545042 GGA3Q9NZ52 723 aa16.48■□□□□ 0.23
DDX55-213ENST00000545042 ABT1Q9ULW3 272 aaKnown RBP16.48■□□□□ 0.23
DDX55-213ENST00000545042 PA2G4Q9UQ80 394 aaKnown RBP16.48■□□□□ 0.23
DDX55-213ENST00000545042 FAM205AQ6ZU69 1335 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms