RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 CCDC102BQ68D86 513 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 KCNB2Q92953 911 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 HELLSQ9NRZ9 838 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 K7ELQ4 463 aaPredicted RBP11.23□□□□□ -0.61
GNE-206ENST00000543356 NPHP1O15259 732 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 ST18O60284 1047 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 MCAMP43121 646 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 ST5P78524 1137 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 PTH1RQ03431 593 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 CELF1Q92879 486 aaKnown RBP11.23□□□□□ -0.61
GNE-206ENST00000543356 MAP4K1Q92918 833 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 TFCP2L1Q9NZI6 479 aa11.23□□□□□ -0.61
GNE-206ENST00000543356 RNF113AO15541 343 aaKnown RBP11.22□□□□□ -0.61
GNE-206ENST00000543356 TAF5LO75529 589 aa11.22□□□□□ -0.61
GNE-206ENST00000543356 CD2BP2O95400 341 aaKnown RBP11.22□□□□□ -0.61
GNE-206ENST00000543356 SERPINB2P05120 415 aa11.22□□□□□ -0.61
GNE-206ENST00000543356 ZFYP08048 801 aaPredicted RBP11.22□□□□□ -0.61
GNE-206ENST00000543356 PHKA1P46020 1223 aa11.22□□□□□ -0.61
GNE-206ENST00000543356 RPS8P62241 208 aaKnown RBP11.22□□□□□ -0.61
GNE-206ENST00000543356 FKBP4Q02790 459 aaKnown RBP eCLIP11.22□□□□□ -0.61
GNE-206ENST00000543356 MCMDC2Q4G0Z9 681 aa11.22□□□□□ -0.61
GNE-206ENST00000543356 ZMYM1Q5SVZ6 1142 aa11.22□□□□□ -0.61
GNE-206ENST00000543356 POLRMTO00411 1230 aaKnown RBP11.22□□□□□ -0.61
GNE-206ENST00000543356 ZAP70P43403 619 aa11.22□□□□□ -0.61
GNE-206ENST00000543356 UBE4AQ14139 1066 aa11.22□□□□□ -0.61
GNE-206ENST00000543356 TTF1Q15361 905 aaPredicted RBP11.22□□□□□ -0.61
GNE-206ENST00000543356 ZNF589Q86UQ0 364 aaPredicted RBP11.22□□□□□ -0.61
GNE-206ENST00000543356 ANTXR1Q9H6X2 564 aa11.22□□□□□ -0.61
GNE-206ENST00000543356 MINPP1Q9UNW1 487 aa11.22□□□□□ -0.61
GNE-206ENST00000543356 DDR1Q08345 913 aa11.21□□□□□ -0.61
GNE-206ENST00000543356 ANKRD2Q9GZV1 360 aa11.21□□□□□ -0.61
GNE-206ENST00000543356 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.61
GNE-206ENST00000543356 LRRC37AA6NMS7 1700 aa11.21□□□□□ -0.62
GNE-206ENST00000543356 ANKRD31Q8N7Z5 1873 aa11.21□□□□□ -0.62
GNE-206ENST00000543356 FGD1P98174 961 aa11.21□□□□□ -0.62
GNE-206ENST00000543356 NECTIN1Q15223 517 aa11.21□□□□□ -0.62
GNE-206ENST00000543356 CRY2Q49AN0 593 aa11.21□□□□□ -0.62
GNE-206ENST00000543356 COL23A1Q86Y22 540 aaPredicted RBP11.21□□□□□ -0.62
GNE-206ENST00000543356 CCDC24Q8N4L8 307 aa11.21□□□□□ -0.62
GNE-206ENST00000543356 RBM8AQ9Y5S9 174 aaKnown RBP11.21□□□□□ -0.62
GNE-206ENST00000543356 ZNF804BA4D1E1 1349 aa11.2□□□□□ -0.62
GNE-206ENST00000543356 MCM2P49736 904 aa11.2□□□□□ -0.62
GNE-206ENST00000543356 GRAPQ13588 217 aa11.2□□□□□ -0.62
GNE-206ENST00000543356 NLGN1Q8N2Q7 840 aa11.2□□□□□ -0.62
GNE-206ENST00000543356 GRAPLQ8TC17 118 aaPredicted RBP11.2□□□□□ -0.62
GNE-206ENST00000543356 PNPLA7Q6ZV29 1317 aa11.2□□□□□ -0.62
GNE-206ENST00000543356 CYP2E1P05181 493 aaPredicted RBP11.2□□□□□ -0.62
GNE-206ENST00000543356 RBM10P98175 930 aaKnown RBP11.2□□□□□ -0.62
GNE-206ENST00000543356 PDE4CQ08493 712 aa11.2□□□□□ -0.62
GNE-206ENST00000543356 ZSCAN25Q6NSZ9 544 aa11.2□□□□□ -0.62
GNE-206ENST00000543356 PI16Q6UXB8 463 aa11.2□□□□□ -0.62
GNE-206ENST00000543356 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.2□□□□□ -0.62
GNE-206ENST00000543356 HMG20BQ9P0W2 317 aa11.2□□□□□ -0.62
GNE-206ENST00000543356 MAST3O60307 1309 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 CHGBP05060 677 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 SPATA5Q8NB90 893 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 CAMKK2Q96RR4 588 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 TM6SF1Q9BZW5 370 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 KLRG2A4D1S0 409 aaPredicted RBP11.19□□□□□ -0.62
GNE-206ENST00000543356 SNAP23O00161 211 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 ZBTB22O15209 634 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 NEK4P51957 841 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 RASGRF1Q13972 1273 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 TPRNQ4KMQ1 711 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 RNF20Q5VTR2 975 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 PRPF40BQ6NWY9 871 aaKnown RBP11.19□□□□□ -0.62
GNE-206ENST00000543356 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
GNE-206ENST00000543356 SEC62Q99442 399 aaKnown RBP11.19□□□□□ -0.62
GNE-206ENST00000543356 U3KPZ7 1027 aaPredicted RBP11.19□□□□□ -0.62
GNE-206ENST00000543356 MYO5AQ9Y4I1 1855 aaKnown RBP11.18□□□□□ -0.62
GNE-206ENST00000543356 SLC27A2O14975 620 aa11.18□□□□□ -0.62
GNE-206ENST00000543356 ZKSCAN1P17029 563 aaPredicted RBP11.18□□□□□ -0.62
GNE-206ENST00000543356 KCNJ4P48050 445 aa11.18□□□□□ -0.62
GNE-206ENST00000543356 APPBP2Q92624 585 aa11.18□□□□□ -0.62
GNE-206ENST00000543356 RPGRQ92834 1020 aaKnown RBP11.18□□□□□ -0.62
GNE-206ENST00000543356 DSCC1Q9BVC3 393 aa11.18□□□□□ -0.62
GNE-206ENST00000543356 PIH1D3Q9NQM4 214 aaKnown RBP11.18□□□□□ -0.62
GNE-206ENST00000543356 RPAP1Q9BWH6 1393 aaPredicted RBP11.18□□□□□ -0.62
GNE-206ENST00000543356 MYH13Q9UKX3 1938 aa11.18□□□□□ -0.62
GNE-206ENST00000543356 ADD2P35612 726 aa11.18□□□□□ -0.62
GNE-206ENST00000543356 TSGA10IPQ3SY00 556 aa11.18□□□□□ -0.62
GNE-206ENST00000543356 CCDC129Q6ZRS4 1044 aa11.18□□□□□ -0.62
GNE-206ENST00000543356 RBM17Q96I25 401 aaKnown RBP11.18□□□□□ -0.62
GNE-206ENST00000543356 GNL3LQ9NVN8 582 aaKnown RBP11.18□□□□□ -0.62
GNE-206ENST00000543356 M0R2C6 588 aa11.17□□□□□ -0.62
GNE-206ENST00000543356 HOXA10P31260 410 aaPredicted RBP11.17□□□□□ -0.62
GNE-206ENST00000543356 DDIT3P35638 169 aa11.17□□□□□ -0.62
GNE-206ENST00000543356 BCAMP50895 628 aa11.17□□□□□ -0.62
GNE-206ENST00000543356 UBE3CQ15386 1083 aa11.17□□□□□ -0.62
GNE-206ENST00000543356 SLKQ9H2G2 1235 aaPredicted RBP11.17□□□□□ -0.62
GNE-206ENST00000543356 PDS5AQ29RF7 1337 aaKnown RBP11.17□□□□□ -0.62
GNE-206ENST00000543356 MAST2Q6P0Q8 1798 aa11.17□□□□□ -0.62
GNE-206ENST00000543356 COL11A2P13942 1736 aaPredicted RBP11.17□□□□□ -0.62
GNE-206ENST00000543356 LTBP1Q14766 1721 aa11.17□□□□□ -0.62
GNE-206ENST00000543356 SEMA3EO15041 775 aa11.17□□□□□ -0.62
GNE-206ENST00000543356 EZH2Q15910 746 aaKnown RBP11.17□□□□□ -0.62
GNE-206ENST00000543356 CAVIN4Q5BKX8 364 aa11.17□□□□□ -0.62
GNE-206ENST00000543356 OSBP2Q969R2 916 aa11.17□□□□□ -0.62
GNE-206ENST00000543356 IRS2Q9Y4H2 1338 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms