RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 KIF3AQ9Y496 699 aa21.97■■□□□ 1.11
COPS7A-215ENST00000543155 LRP6O75581 1613 aa21.97■■□□□ 1.11
COPS7A-215ENST00000543155 MAP3K15Q6ZN16 1313 aa21.97■■□□□ 1.11
COPS7A-215ENST00000543155 CDHR2Q9BYE9 1310 aa21.97■■□□□ 1.11
COPS7A-215ENST00000543155 ADORA1P30542 326 aa21.97■■□□□ 1.11
COPS7A-215ENST00000543155 FKBP4Q02790 459 aaKnown RBP eCLIP21.97■■□□□ 1.11
COPS7A-215ENST00000543155 APOBRQ0VD83 1088 aa21.97■■□□□ 1.11
COPS7A-215ENST00000543155 IFIT5Q13325 482 aaKnown RBP21.97■■□□□ 1.11
COPS7A-215ENST00000543155 FAM89AQ96GI7 184 aa21.97■■□□□ 1.11
COPS7A-215ENST00000543155 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.97■■□□□ 1.11
COPS7A-215ENST00000543155 RIC1Q4ADV7 1423 aa21.96■■□□□ 1.11
COPS7A-215ENST00000543155 MYH3P11055 1940 aa21.96■■□□□ 1.11
COPS7A-215ENST00000543155 TERF1P54274 439 aa21.96■■□□□ 1.11
COPS7A-215ENST00000543155 NAA16Q6N069 864 aaPredicted RBP21.96■■□□□ 1.11
COPS7A-215ENST00000543155 GIGYF2Q6Y7W6 1299 aaKnown RBP21.95■■□□□ 1.11
COPS7A-215ENST00000543155 OSBP2Q969R2 916 aa21.95■■□□□ 1.11
COPS7A-215ENST00000543155 CHMP4CQ96CF2 233 aa21.95■■□□□ 1.11
COPS7A-215ENST00000543155 CTNNA3Q9UI47 895 aa21.95■■□□□ 1.1
COPS7A-215ENST00000543155 CFAP45Q9UL16 551 aa21.95■■□□□ 1.1
COPS7A-215ENST00000543155 PLCH1Q4KWH8 1693 aa21.95■■□□□ 1.1
COPS7A-215ENST00000543155 A0A0G2JLW4 131 aa21.94■■□□□ 1.1
COPS7A-215ENST00000543155 PTPDC1A2A3K4 754 aa21.94■■□□□ 1.1
COPS7A-215ENST00000543155 KIAA2012Q0VF49 1180 aa21.94■■□□□ 1.1
COPS7A-215ENST00000543155 ZNF274Q96GC6 653 aaPredicted RBP21.94■■□□□ 1.1
COPS7A-215ENST00000543155 TNMDQ9H2S6 317 aa21.94■■□□□ 1.1
COPS7A-215ENST00000543155 DACT1Q9NYF0 836 aa21.94■■□□□ 1.1
COPS7A-215ENST00000543155 COL14A1Q05707 1796 aaKnown RBP21.94■■□□□ 1.1
COPS7A-215ENST00000543155 CTDNEP1O95476 244 aa21.94■■□□□ 1.1
COPS7A-215ENST00000543155 HSP90AB3PQ58FF7 597 aa21.94■■□□□ 1.1
COPS7A-215ENST00000543155 CLSTN2Q9H4D0 955 aa21.94■■□□□ 1.1
COPS7A-215ENST00000543155 DISP2A7MBM2 1401 aa21.94■■□□□ 1.1
COPS7A-215ENST00000543155 DDX60Q8IY21 1712 aaKnown RBP21.93■■□□□ 1.1
COPS7A-215ENST00000543155 FBXL16Q8N461 479 aa21.93■■□□□ 1.1
COPS7A-215ENST00000543155 CCDC85AQ96PX6 553 aaPredicted RBP21.93■■□□□ 1.1
COPS7A-215ENST00000543155 TYRO3Q06418 890 aa21.92■■□□□ 1.1
COPS7A-215ENST00000543155 CAMK4Q16566 473 aa21.92■■□□□ 1.1
COPS7A-215ENST00000543155 RBM43Q6ZSC3 357 aaKnown RBP21.92■■□□□ 1.1
COPS7A-215ENST00000543155 FAM200AQ8TCP9 573 aa21.92■■□□□ 1.1
COPS7A-215ENST00000543155 BICD2Q8TD16 824 aa21.92■■□□□ 1.1
COPS7A-215ENST00000543155 PGBD1Q96JS3 809 aa21.92■■□□□ 1.1
COPS7A-215ENST00000543155 SALL1Q9NSC2 1324 aa21.92■■□□□ 1.1
COPS7A-215ENST00000543155 WASHC4Q2M389 1173 aa21.92■■□□□ 1.1
COPS7A-215ENST00000543155 NLRP10Q86W26 655 aa21.92■■□□□ 1.1
COPS7A-215ENST00000543155 BCL9O00512 1426 aa21.91■■□□□ 1.1
COPS7A-215ENST00000543155 PDIA3P30101 505 aaKnown RBP21.91■■□□□ 1.1
COPS7A-215ENST00000543155 ATP2B3Q16720 1220 aa21.91■■□□□ 1.1
COPS7A-215ENST00000543155 IMMTQ16891 758 aaKnown RBP21.91■■□□□ 1.1
COPS7A-215ENST00000543155 TTLL5Q6EMB2 1281 aa21.91■■□□□ 1.1
COPS7A-215ENST00000543155 APPBP2Q92624 585 aa21.91■■□□□ 1.1
COPS7A-215ENST00000543155 BTG4Q9NY30 223 aa21.91■■□□□ 1.1
COPS7A-215ENST00000543155 MRVI1Q9Y6F6 885 aa21.91■■□□□ 1.1
COPS7A-215ENST00000543155 ZAP70P43403 619 aa21.91■■□□□ 1.1
COPS7A-215ENST00000543155 CCT2P78371 535 aaKnown RBP21.91■■□□□ 1.1
COPS7A-215ENST00000543155 SCARF1Q14162 830 aa21.91■■□□□ 1.1
COPS7A-215ENST00000543155 NUP98P52948 1817 aa21.9■■□□□ 1.1
COPS7A-215ENST00000543155 WNK3Q9BYP7 1800 aa21.9■■□□□ 1.1
COPS7A-215ENST00000543155 HLFQ16534 295 aa21.9■■□□□ 1.1
COPS7A-215ENST00000543155 METTL24Q5JXM2 366 aa21.9■■□□□ 1.1
COPS7A-215ENST00000543155 RIPOR2Q9Y4F9 1068 aa21.9■■□□□ 1.1
COPS7A-215ENST00000543155 AKAP11Q9UKA4 1901 aa21.9■■□□□ 1.1
COPS7A-215ENST00000543155 FOXP2O15409 715 aa21.89■■□□□ 1.1
COPS7A-215ENST00000543155 EVCP57679 992 aa21.89■■□□□ 1.1
COPS7A-215ENST00000543155 NAP1L2Q9ULW6 460 aaPredicted RBP21.89■■□□□ 1.1
COPS7A-215ENST00000543155 R3HCC1Q9Y3T6 440 aaKnown RBP21.89■■□□□ 1.1
COPS7A-215ENST00000543155 ITGA6P23229 1130 aa21.89■■□□□ 1.09
COPS7A-215ENST00000543155 GPTP24298 496 aa21.89■■□□□ 1.09
COPS7A-215ENST00000543155 CTSWP56202 376 aa21.89■■□□□ 1.09
COPS7A-215ENST00000543155 ATL3Q6DD88 541 aa21.89■■□□□ 1.09
COPS7A-215ENST00000543155 TTLL11Q8NHH1 800 aa21.89■■□□□ 1.09
COPS7A-215ENST00000543155 NCOA5Q9HCD5 579 aaKnown RBP21.89■■□□□ 1.09
COPS7A-215ENST00000543155 ANKRD18BA2A2Z9 1011 aa21.88■■□□□ 1.09
COPS7A-215ENST00000543155 NR1I2O75469 434 aa21.88■■□□□ 1.09
COPS7A-215ENST00000543155 CYP19A1P11511 503 aaPredicted RBP21.88■■□□□ 1.09
COPS7A-215ENST00000543155 ADD1P35611 737 aaKnown RBP21.88■■□□□ 1.09
COPS7A-215ENST00000543155 CHST3Q7LGC8 479 aa21.88■■□□□ 1.09
COPS7A-215ENST00000543155 CKAP2LQ8IYA6 745 aa21.88■■□□□ 1.09
COPS7A-215ENST00000543155 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.88■■□□□ 1.09
COPS7A-215ENST00000543155 GREM2Q9H772 168 aa21.88■■□□□ 1.09
COPS7A-215ENST00000543155 AP5Z1O43299 807 aa21.88■■□□□ 1.09
COPS7A-215ENST00000543155 PLCB2Q00722 1185 aa21.88■■□□□ 1.09
COPS7A-215ENST00000543155 LDHAL6AQ6ZMR3 332 aa21.88■■□□□ 1.09
COPS7A-215ENST00000543155 ZNF512BQ96KM6 892 aaPredicted RBP21.88■■□□□ 1.09
COPS7A-215ENST00000543155 CARMIL3Q8ND23 1372 aa21.87■■□□□ 1.09
COPS7A-215ENST00000543155 SYNE4Q8N205 404 aa21.87■■□□□ 1.09
COPS7A-215ENST00000543155 ZNF396Q96N95 335 aaPredicted RBP21.87■■□□□ 1.09
COPS7A-215ENST00000543155 LRP5O75197 1615 aa21.87■■□□□ 1.09
COPS7A-215ENST00000543155 ATRNO75882 1429 aa21.87■■□□□ 1.09
COPS7A-215ENST00000543155 FGAP02671 866 aa21.86■■□□□ 1.09
COPS7A-215ENST00000543155 FOSBP53539 338 aa21.86■■□□□ 1.09
COPS7A-215ENST00000543155 ZSCAN25Q6NSZ9 544 aa21.86■■□□□ 1.09
COPS7A-215ENST00000543155 PUS7LQ9H0K6 701 aaKnown RBP21.86■■□□□ 1.09
COPS7A-215ENST00000543155 CNNM1Q9NRU3 951 aa21.86■■□□□ 1.09
COPS7A-215ENST00000543155 RCOR1Q9UKL0 485 aa21.86■■□□□ 1.09
COPS7A-215ENST00000543155 ARAP2Q8WZ64 1704 aa21.86■■□□□ 1.09
COPS7A-215ENST00000543155 TPM3P06753 285 aa21.86■■□□□ 1.09
COPS7A-215ENST00000543155 ANO6Q4KMQ2 910 aa21.86■■□□□ 1.09
COPS7A-215ENST00000543155 PIBF1Q8WXW3 757 aa21.86■■□□□ 1.09
COPS7A-215ENST00000543155 IRS4O14654 1257 aaPredicted RBP21.85■■□□□ 1.09
COPS7A-215ENST00000543155 MCAMP43121 646 aa21.85■■□□□ 1.09
COPS7A-215ENST00000543155 HAND2P61296 217 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms