RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 CHRNDQ07001 517 aa9.21□□□□□ -0.94
LRP6-206ENST00000543091 TNIP1Q15025 636 aa9.21□□□□□ -0.94
LRP6-206ENST00000543091 ILDR1Q86SU0 546 aaPredicted RBP9.21□□□□□ -0.94
LRP6-206ENST00000543091 NUP133Q8WUM0 1156 aa9.21□□□□□ -0.94
LRP6-206ENST00000543091 ISCA1Q9BUE6 129 aa9.21□□□□□ -0.94
LRP6-206ENST00000543091 ZNF804BA4D1E1 1349 aa9.21□□□□□ -0.94
LRP6-206ENST00000543091 SLC4A3P48751 1232 aa9.2□□□□□ -0.94
LRP6-206ENST00000543091 CCDC178Q5BJE1 867 aa9.2□□□□□ -0.94
LRP6-206ENST00000543091 SLC4A4Q9Y6R1 1079 aa9.2□□□□□ -0.94
LRP6-206ENST00000543091 MCMDC2Q4G0Z9 681 aa9.2□□□□□ -0.94
LRP6-206ENST00000543091 TSHZ3Q63HK5 1081 aa9.2□□□□□ -0.94
LRP6-206ENST00000543091 TTC6Q86TZ1 520 aa9.2□□□□□ -0.94
LRP6-206ENST00000543091 PDE8BO95263 885 aa9.2□□□□□ -0.94
LRP6-206ENST00000543091 PRPF40BQ6NWY9 871 aaKnown RBP9.2□□□□□ -0.94
LRP6-206ENST00000543091 MAGEB6Q8N7X4 407 aa9.2□□□□□ -0.94
LRP6-206ENST00000543091 HMG20BQ9P0W2 317 aa9.2□□□□□ -0.94
LRP6-206ENST00000543091 CCDC196A0A1B0GTZ2 297 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 MFSD6Q6ZSS7 791 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 ZSCAN31Q96LW9 406 aaPredicted RBP9.19□□□□□ -0.94
LRP6-206ENST00000543091 AOX1Q06278 1338 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 BCL9O00512 1426 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 DLGAP5Q15398 846 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 GPR108Q9NPR9 543 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 TSPY2A6NKD2 308 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 GTF2IP78347 998 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 PICALMQ13492 652 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 TTLL11Q8NHH1 800 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 CTCFLQ8NI51 663 aaPredicted RBP9.19□□□□□ -0.94
LRP6-206ENST00000543091 SYAP1Q96A49 352 aaPredicted RBP9.19□□□□□ -0.94
LRP6-206ENST00000543091 PDRG1Q9NUG6 133 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 JAG2Q9Y219 1238 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 MON2Q7Z3U7 1717 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 VPS37CA5D8V6 355 aaPredicted RBP9.19□□□□□ -0.94
LRP6-206ENST00000543091 SEMA3EO15041 775 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 CAMTA2O94983 1202 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 POTEAQ6S8J7 498 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 TEX11Q8IYF3 940 aa9.19□□□□□ -0.94
LRP6-206ENST00000543091 USP42Q9H9J4 1324 aaKnown RBP9.18□□□□□ -0.94
LRP6-206ENST00000543091 SDSP20132 328 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 MFSD14BQ5SR56 506 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 SPATA5Q8NB90 893 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 BSDC1Q9NW68 430 aaPredicted RBP9.18□□□□□ -0.94
LRP6-206ENST00000543091 MTFR1LQ9H019 292 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 TAOK3Q9H2K8 898 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 CNNM2Q9H8M5 875 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 SEC31BQ9NQW1 1179 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 COL3A1P02461 1466 aaPredicted RBP9.18□□□□□ -0.94
LRP6-206ENST00000543091 RAD50Q92878 1312 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 COL14A1Q05707 1796 aaKnown RBP9.18□□□□□ -0.94
LRP6-206ENST00000543091 IGKV5-2P06315 115 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
LRP6-206ENST00000543091 TNFAIP1Q13829 316 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 IL27Q8NEV9 243 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 ATP10DQ9P241 1426 aa9.18□□□□□ -0.94
LRP6-206ENST00000543091 TTLL5Q6EMB2 1281 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 KRT23Q9C075 422 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 KDM6AO15550 1401 aaPredicted RBP9.17□□□□□ -0.94
LRP6-206ENST00000543091 IFIT3O14879 490 aaKnown RBP9.17□□□□□ -0.94
LRP6-206ENST00000543091 CCDC96Q2M329 555 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 WASF1Q92558 559 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 TEKT1Q969V4 418 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 CCDC43Q96MW1 224 aaKnown RBP9.17□□□□□ -0.94
LRP6-206ENST00000543091 MCM9Q9NXL9 1143 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 NUCB2P80303 420 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 LRRC24Q50LG9 513 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 NCOA7Q8NI08 942 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 ESR2Q92731 530 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 AHDC1Q5TGY3 1603 aaPredicted RBP9.17□□□□□ -0.94
LRP6-206ENST00000543091 MYOM1P52179 1685 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 ABCC6O95255 1503 aa9.17□□□□□ -0.94
LRP6-206ENST00000543091 ATP5JP18859 108 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 CASTP20810 708 aaKnown RBP9.16□□□□□ -0.94
LRP6-206ENST00000543091 CATIPQ7Z7H3 387 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 ZNF34Q8IZ26 560 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 HELLSQ9NRZ9 838 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 TTF2Q9UNY4 1162 aaKnown RBP9.16□□□□□ -0.94
LRP6-206ENST00000543091 RGL2O15211 777 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 GYG1P46976 350 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 DOK7Q18PE1 504 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 MIGA1Q8NAN2 632 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 APPBP2Q92624 585 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 SEC63Q9UGP8 760 aaKnown RBP9.16□□□□□ -0.94
LRP6-206ENST00000543091 NFAT5O94916 1531 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 C21orf2O43822 256 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 CCDC102BQ68D86 513 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 TBC1D9Q6ZT07 1266 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 KBTBD3Q8NAB2 608 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 KIF5BP33176 963 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 TRAF1Q13077 416 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 FOXD4L5Q5VV16 416 aaPredicted RBP9.16□□□□□ -0.94
LRP6-206ENST00000543091 PRR5LQ6MZQ0 368 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 FOXD4L4Q8WXT5 416 aaPredicted RBP9.16□□□□□ -0.94
LRP6-206ENST00000543091 BACH2Q9BYV9 841 aa9.16□□□□□ -0.94
LRP6-206ENST00000543091 PIK3C2AO00443 1686 aa9.15□□□□□ -0.94
LRP6-206ENST00000543091 GRIN3BO60391 1043 aa9.15□□□□□ -0.94
LRP6-206ENST00000543091 TSPY3P0CV98 308 aa9.15□□□□□ -0.94
LRP6-206ENST00000543091 TSPY8P0CW00 308 aa9.15□□□□□ -0.94
LRP6-206ENST00000543091 INTS5Q6P9B9 1019 aaKnown RBP9.15□□□□□ -0.94
LRP6-206ENST00000543091 CRAMP1Q96RY5 1269 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms