RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	NRBP1	Q9UHY1	535 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	SMC3	Q9UQE7	1217 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	USP42	Q9H9J4	1324 aa	Known RBP	6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	SURF6	O75683	361 aa	Known RBP	6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	BBOX1	O75936	387 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	UBE2H	P62256	183 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LDHAL6A	Q6ZMR3	332 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ZNF771	Q7L3S4	317 aa	Predicted RBP	6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LUZP1	Q86V48	1076 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	SLF2	Q8IX21	1173 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CKAP2L	Q8IYA6	745 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TTLL6	Q8N841	843 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ZNF592	Q92610	1267 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	OSBPL3	Q9H4L5	887 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TMOD2	Q9NZR1	351 aa		6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	KDM6A	O15550	1401 aa	Predicted RBP	6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	RPAP1	Q9BWH6	1393 aa	Predicted RBP	6.69	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	MASTL	Q96GX5	879 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	GTPBP4	Q9BZE4	634 aa	Known RBP	6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ZBTB22	O15209	634 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	SRGAP3	O43295	1099 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	EIF6	P56537	245 aa	Known RBP	6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CCDC93	Q567U6	631 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	DPY19L2	Q6NUT2	758 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	RUFY3	Q7L099	469 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CCDC186	Q7Z3E2	898 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	RTKN2	Q8IZC4	609 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	NECAB1	Q8N987	351 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	DIAPH3	Q9NSV4	1193 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CD2AP	Q9Y5K6	639 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LRRFIP2	Q9Y608	721 aa	Known RBP	6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	F13A1	P00488	732 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LMOD1	P29536	600 aa	Predicted RBP	6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TGFB2	P61812	414 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TRIM28	Q13263	835 aa	Known RBP	6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CWC27	Q6UX04	472 aa	Known RBP	6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TTLL7	Q6ZT98	887 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	NEUROD6	Q96NK8	337 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CGN	Q9P2M7	1197 aa	Known RBP	6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	SRP68	Q9UHB9	627 aa	Known RBP	6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	HDAC9	Q9UKV0	1011 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	SNX14	Q9Y5W7	946 aa		6.68	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	RAB11FIP3	O75154	756 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ANAPC15	P60006	121 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TRIM34	Q9BYJ4	488 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ZNF219	Q9P2Y4	722 aa	Predicted RBP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783		V9GYY5	206 aa	Predicted RBP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LTN1	O94822	1766 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	GJB2	P29033	226 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ARHGAP27	Q6ZUM4	889 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	COL23A1	Q86Y22	540 aa	Predicted RBP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CAST	P20810	708 aa	Known RBP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	HSPA4	P34932	840 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	NCBP1	Q09161	790 aa	Known RBP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	DPP8	Q6V1X1	898 aa	Predicted RBP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ZNF804A	Q7Z570	1209 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	FUCA2	Q9BTY2	467 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	PHAX	Q9H814	394 aa	Known RBP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TFIP11	Q9UBB9	837 aa	Known RBP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	PLCH1	Q4KWH8	1693 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LIG1	P18858	919 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	IL15	P40933	162 aa	Predicted RBP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	MAPK8IP2	Q13387	824 aa	Predicted RBP	6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	GCKR	Q14397	625 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	NFIX	Q14938	502 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	NIM1K	Q8IY84	436 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	GGA1	Q9UJY5	639 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	FBXO3	Q9UK99	471 aa		6.67	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	SALL3	Q9BXA9	1300 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LMO7	Q8WWI1	1683 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LETM1	O95202	739 aa	Predicted RBP	6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	RPS8	P62241	208 aa	Known RBP	6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LMBR1L	Q6UX01	489 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	NLRP10	Q86W26	655 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	BBX	Q8WY36	941 aa	Predicted RBP	6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ANKRD7	Q92527	254 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TCEANC2	Q96MN5	208 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LIMCH1	Q9UPQ0	1083 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TNNT1	P13805	278 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ATP2B4	P23634	1241 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ATP8B2	P98198	1209 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	COL9A3	Q14050	684 aa	Predicted RBP	6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	WASHC4	Q2M389	1173 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TTC39A	Q5SRH9	613 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ZSCAN25	Q6NSZ9	544 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	FAM89A	Q96GI7	184 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CCDC85A	Q96PX6	553 aa	Predicted RBP	6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	TRIM5	Q9C035	493 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	MTMR6	Q9Y217	621 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	NEURL1B	A8MQ27	555 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	KIF20A	O95235	890 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LDHC	P07864	332 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	UQCRFS1P1	P0C7P4	283 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	CCDC192	P0DO97	292 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	ADCK5	Q3MIX3	580 aa		6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	INTS5	Q6P9B9	1019 aa	Known RBP	6.66	□□□□□ -1.34
RAPGEF4-215	ENST00000540783	LARGE2	Q8N3Y3	721 aa		6.66	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms