RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ADM5C9JUS6 153 aa19.45■□□□□ 0.7
UBE3B-211ENST00000539843 VAMP4O75379 141 aa19.45■□□□□ 0.7
UBE3B-211ENST00000539843 ZNF280AP59817 542 aaPredicted RBP19.45■□□□□ 0.7
UBE3B-211ENST00000539843 EXOSC9Q06265 439 aaKnown RBP19.45■□□□□ 0.7
UBE3B-211ENST00000539843 CCDC102AQ96A19 550 aa19.45■□□□□ 0.7
UBE3B-211ENST00000539843 MYOZ2Q9NPC6 264 aa19.45■□□□□ 0.7
UBE3B-211ENST00000539843 EGFRP00533 1210 aa19.44■□□□□ 0.7
UBE3B-211ENST00000539843 MMP14P50281 582 aa19.44■□□□□ 0.7
UBE3B-211ENST00000539843 SCARF1Q14162 830 aa19.44■□□□□ 0.7
UBE3B-211ENST00000539843 RGMBQ6NW40 437 aa19.44■□□□□ 0.7
UBE3B-211ENST00000539843 FAM9BQ8IZU0 186 aa19.44■□□□□ 0.7
UBE3B-211ENST00000539843 CHMP3Q9Y3E7 222 aa19.44■□□□□ 0.7
UBE3B-211ENST00000539843 FAM161AQ3B820 660 aa19.43■□□□□ 0.7
UBE3B-211ENST00000539843 ANGEL2Q5VTE6 544 aaKnown RBP19.43■□□□□ 0.7
UBE3B-211ENST00000539843 ZNF804BA4D1E1 1349 aa19.43■□□□□ 0.7
UBE3B-211ENST00000539843 MYH3P11055 1940 aa19.43■□□□□ 0.7
UBE3B-211ENST00000539843 IFIT5Q13325 482 aaKnown RBP19.42■□□□□ 0.7
UBE3B-211ENST00000539843 STRIP1Q5VSL9 837 aa19.42■□□□□ 0.7
UBE3B-211ENST00000539843 HDAC9Q9UKV0 1011 aa19.42■□□□□ 0.7
UBE3B-211ENST00000539843 PITPNM2Q9BZ72 1349 aa19.42■□□□□ 0.7
UBE3B-211ENST00000539843 CSF1RP07333 972 aa19.41■□□□□ 0.7
UBE3B-211ENST00000539843 ZNF157P51786 506 aaPredicted RBP19.41■□□□□ 0.7
UBE3B-211ENST00000539843 FKBP1BP68106 108 aa19.41■□□□□ 0.7
UBE3B-211ENST00000539843 TAF7LQ5H9L4 462 aa19.41■□□□□ 0.7
UBE3B-211ENST00000539843 CDCA5Q96FF9 252 aa19.41■□□□□ 0.7
UBE3B-211ENST00000539843 NF2P35240 595 aa19.4■□□□□ 0.7
UBE3B-211ENST00000539843 CCDC57Q2TAC2 916 aa19.39■□□□□ 0.69
UBE3B-211ENST00000539843 GMLQ99445 158 aa19.39■□□□□ 0.69
UBE3B-211ENST00000539843 C9orf78Q9NZ63 289 aaPredicted RBP19.39■□□□□ 0.69
UBE3B-211ENST00000539843 CACNA1FO60840 1977 aa19.39■□□□□ 0.69
UBE3B-211ENST00000539843 CASP7P55210 303 aa19.38■□□□□ 0.69
UBE3B-211ENST00000539843 CHRNDQ07001 517 aa19.38■□□□□ 0.69
UBE3B-211ENST00000539843 SCN9AQ15858 1988 aa19.38■□□□□ 0.69
UBE3B-211ENST00000539843 DACT2Q5SW24 774 aa19.38■□□□□ 0.69
UBE3B-211ENST00000539843 TTLL5Q6EMB2 1281 aa19.38■□□□□ 0.69
UBE3B-211ENST00000539843 REM2Q8IYK8 340 aaPredicted RBP19.38■□□□□ 0.69
UBE3B-211ENST00000539843 ABHD8Q96I13 439 aa19.38■□□□□ 0.69
UBE3B-211ENST00000539843 F6X3S4 739 aa19.37■□□□□ 0.69
UBE3B-211ENST00000539843 BEND3Q5T5X7 828 aa19.37■□□□□ 0.69
UBE3B-211ENST00000539843 DLK2Q6UY11 383 aa19.37■□□□□ 0.69
UBE3B-211ENST00000539843 TSKSQ9UJT2 592 aa19.37■□□□□ 0.69
UBE3B-211ENST00000539843 ASTN2O75129 1339 aaPredicted RBP19.36■□□□□ 0.69
UBE3B-211ENST00000539843 GRM8O00222 908 aa19.36■□□□□ 0.69
UBE3B-211ENST00000539843 TTLL12Q14166 644 aaPredicted RBP19.36■□□□□ 0.69
UBE3B-211ENST00000539843 SLC4A10Q6U841 1118 aa19.36■□□□□ 0.69
UBE3B-211ENST00000539843 ZNF804AQ7Z570 1209 aa19.36■□□□□ 0.69
UBE3B-211ENST00000539843 SRCIN1Q9C0H9 1055 aa19.36■□□□□ 0.69
UBE3B-211ENST00000539843 SAGE1Q9NXZ1 904 aa19.36■□□□□ 0.69
UBE3B-211ENST00000539843 SPEF2Q9C093 1822 aa19.36■□□□□ 0.69
UBE3B-211ENST00000539843 PSME4Q14997 1843 aa19.35■□□□□ 0.69
UBE3B-211ENST00000539843 ALDH1L1O75891 902 aa19.35■□□□□ 0.69
UBE3B-211ENST00000539843 APOBEC3FQ8IUX4 373 aaKnown RBP19.35■□□□□ 0.69
UBE3B-211ENST00000539843 CNNM1Q9NRU3 951 aa19.35■□□□□ 0.69
UBE3B-211ENST00000539843 SLC10A3P09131 477 aa19.34■□□□□ 0.69
UBE3B-211ENST00000539843 GTF2IP78347 998 aa19.34■□□□□ 0.69
UBE3B-211ENST00000539843 KIF23Q02241 960 aaPredicted RBP19.34■□□□□ 0.69
UBE3B-211ENST00000539843 LMBR1LQ6UX01 489 aa19.34■□□□□ 0.69
UBE3B-211ENST00000539843 WNT10BO00744 389 aa19.33■□□□□ 0.68
UBE3B-211ENST00000539843 NBPF9Q3BBW0 867 aa19.33■□□□□ 0.68
UBE3B-211ENST00000539843 LDHAL6AQ6ZMR3 332 aa19.33■□□□□ 0.68
UBE3B-211ENST00000539843 KIAA0825Q8IV33 1275 aa19.33■□□□□ 0.68
UBE3B-211ENST00000539843 CD209Q9NNX6 404 aa19.33■□□□□ 0.68
UBE3B-211ENST00000539843 WTIPA6NIX2 430 aaPredicted RBP19.32■□□□□ 0.68
UBE3B-211ENST00000539843 FAM155AB1AL88 458 aaPredicted RBP19.32■□□□□ 0.68
UBE3B-211ENST00000539843 MYO1BO43795 1136 aa19.32■□□□□ 0.68
UBE3B-211ENST00000539843 FOXO4P98177 505 aa19.32■□□□□ 0.68
UBE3B-211ENST00000539843 TXNRD3Q86VQ6 643 aa19.32■□□□□ 0.68
UBE3B-211ENST00000539843 MXD3Q9BW11 206 aa19.32■□□□□ 0.68
UBE3B-211ENST00000539843 SPINK5Q9NQ38 1064 aaPredicted RBP19.32■□□□□ 0.68
UBE3B-211ENST00000539843 PAPPA2Q9BXP8 1791 aa19.32■□□□□ 0.68
UBE3B-211ENST00000539843 CCDC85CA6NKD9 419 aa19.31■□□□□ 0.68
UBE3B-211ENST00000539843 TAF5LO75529 589 aa19.31■□□□□ 0.68
UBE3B-211ENST00000539843 DLGAP5Q15398 846 aa19.31■□□□□ 0.68
UBE3B-211ENST00000539843 C15orf52Q6ZUT6 534 aaKnown RBP19.31■□□□□ 0.68
UBE3B-211ENST00000539843 ARMC9Q7Z3E5 817 aa19.31■□□□□ 0.68
UBE3B-211ENST00000539843 PLIN1O60240 522 aa19.3■□□□□ 0.68
UBE3B-211ENST00000539843 SASH1O94885 1247 aa19.3■□□□□ 0.68
UBE3B-211ENST00000539843 KLRK1P26718 216 aa19.3■□□□□ 0.68
UBE3B-211ENST00000539843 RASAL3Q86YV0 1011 aa19.3■□□□□ 0.68
UBE3B-211ENST00000539843 HELBQ8NG08 1087 aaPredicted RBP19.3■□□□□ 0.68
UBE3B-211ENST00000539843 E9PSI1 815 aa19.29■□□□□ 0.68
UBE3B-211ENST00000539843 DGKZQ13574 1117 aa19.29■□□□□ 0.68
UBE3B-211ENST00000539843 ZIC5Q96T25 663 aa19.29■□□□□ 0.68
UBE3B-211ENST00000539843 POLR2AP24928 1970 aaKnown RBP19.28■□□□□ 0.68
UBE3B-211ENST00000539843 TRPA1O75762 1119 aa19.28■□□□□ 0.68
UBE3B-211ENST00000539843 COL1A1P02452 1464 aaPredicted RBP19.28■□□□□ 0.68
UBE3B-211ENST00000539843 PTPRCP08575 1304 aa19.27■□□□□ 0.68
UBE3B-211ENST00000539843 IL1R1P14778 569 aa19.27■□□□□ 0.68
UBE3B-211ENST00000539843 FKBP1AP62942 108 aaKnown RBP19.27■□□□□ 0.68
UBE3B-211ENST00000539843 MCOLN1Q9GZU1 580 aa19.27■□□□□ 0.68
UBE3B-211ENST00000539843 RNF186Q9NXI6 227 aa19.27■□□□□ 0.68
UBE3B-211ENST00000539843 UBE2Q2LH0YL09 131 aa19.26■□□□□ 0.67
UBE3B-211ENST00000539843 VPS37DQ86XT2 251 aa19.26■□□□□ 0.67
UBE3B-211ENST00000539843 ZNF594Q96JF6 807 aaPredicted RBP19.26■□□□□ 0.67
UBE3B-211ENST00000539843 CSRNP1Q96S65 589 aa19.26■□□□□ 0.67
UBE3B-211ENST00000539843 SCAF8Q9UPN6 1271 aaKnown RBP19.26■□□□□ 0.67
UBE3B-211ENST00000539843 PPP2R3BQ9Y5P8 575 aa19.26■□□□□ 0.67
UBE3B-211ENST00000539843 MROH5Q6ZUA9 1318 aa19.25■□□□□ 0.67
UBE3B-211ENST00000539843 F8W031 263 aaPredicted RBP19.25■□□□□ 0.67
UBE3B-211ENST00000539843 RBM5P52756 815 aaKnown RBP eCLIP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms