RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 TTC14Q96N46 770 aa26.93■■□□□ 1.9
HOMER3-204ENST00000539827 AKAP11Q9UKA4 1901 aa26.92■■□□□ 1.9
HOMER3-204ENST00000539827 NLRP3Q96P20 1036 aa26.92■■□□□ 1.9
HOMER3-204ENST00000539827 ARAP2Q8WZ64 1704 aa26.92■■□□□ 1.9
HOMER3-204ENST00000539827 UQCRFS1P1P0C7P4 283 aa26.91■■□□□ 1.9
HOMER3-204ENST00000539827 ARID4AP29374 1257 aaPredicted RBP26.91■■□□□ 1.9
HOMER3-204ENST00000539827 RNF20Q5VTR2 975 aa26.91■■□□□ 1.9
HOMER3-204ENST00000539827 TAF6LQ9Y6J9 622 aa26.91■■□□□ 1.9
HOMER3-204ENST00000539827 MAST3O60307 1309 aa26.9■■□□□ 1.9
HOMER3-204ENST00000539827 M0R2C6 588 aa26.9■■□□□ 1.9
HOMER3-204ENST00000539827 ADRA2BP18089 450 aa26.9■■□□□ 1.9
HOMER3-204ENST00000539827 NFIXQ14938 502 aa26.9■■□□□ 1.9
HOMER3-204ENST00000539827 CELF1Q92879 486 aaKnown RBP26.9■■□□□ 1.9
HOMER3-204ENST00000539827 TM6SF1Q9BZW5 370 aa26.9■■□□□ 1.9
HOMER3-204ENST00000539827 ZSWIM6Q9HCJ5 1215 aa26.9■■□□□ 1.9
HOMER3-204ENST00000539827 UBR3Q6ZT12 1888 aa26.9■■□□□ 1.9
HOMER3-204ENST00000539827 AK2P54819 239 aa26.89■■□□□ 1.9
HOMER3-204ENST00000539827 LRRFIP1Q32MZ4 808 aaKnown RBP26.89■■□□□ 1.9
HOMER3-204ENST00000539827 U3KPZ7 1027 aaPredicted RBP26.89■■□□□ 1.9
HOMER3-204ENST00000539827 NPHP1O15259 732 aa26.89■■□□□ 1.89
HOMER3-204ENST00000539827 CYP2E1P05181 493 aaPredicted RBP26.89■■□□□ 1.89
HOMER3-204ENST00000539827 VPS53Q5VIR6 699 aa26.89■■□□□ 1.89
HOMER3-204ENST00000539827 OSBP2Q969R2 916 aa26.89■■□□□ 1.89
HOMER3-204ENST00000539827 LARP6Q9BRS8 491 aaKnown RBP26.89■■□□□ 1.89
HOMER3-204ENST00000539827 RAB3GAP1Q15042 981 aa26.88■■□□□ 1.89
HOMER3-204ENST00000539827 TXNRD1Q16881 649 aa26.88■■□□□ 1.89
HOMER3-204ENST00000539827 WASHC4Q2M389 1173 aa26.88■■□□□ 1.89
HOMER3-204ENST00000539827 PROM2Q8N271 834 aa26.88■■□□□ 1.89
HOMER3-204ENST00000539827 IL27Q8NEV9 243 aa26.88■■□□□ 1.89
HOMER3-204ENST00000539827 PIH1D3Q9NQM4 214 aaKnown RBP26.88■■□□□ 1.89
HOMER3-204ENST00000539827 PDRG1Q9NUG6 133 aa26.88■■□□□ 1.89
HOMER3-204ENST00000539827 CYP46A1Q9Y6A2 500 aa26.88■■□□□ 1.89
HOMER3-204ENST00000539827 CUL4AQ13619 759 aa26.88■■□□□ 1.89
HOMER3-204ENST00000539827 BSDC1Q9NW68 430 aaPredicted RBP26.88■■□□□ 1.89
HOMER3-204ENST00000539827 ZFYP08048 801 aaPredicted RBP26.87■■□□□ 1.89
HOMER3-204ENST00000539827 HMG20BQ9P0W2 317 aa26.87■■□□□ 1.89
HOMER3-204ENST00000539827 BCAMP50895 628 aa26.86■■□□□ 1.89
HOMER3-204ENST00000539827 RUFY3Q7L099 469 aa26.86■■□□□ 1.89
HOMER3-204ENST00000539827 TNPO1Q92973 898 aaKnown RBP26.86■■□□□ 1.89
HOMER3-204ENST00000539827 CWC22Q9HCG8 908 aaKnown RBP26.86■■□□□ 1.89
HOMER3-204ENST00000539827 CARMIL3Q8ND23 1372 aa26.86■■□□□ 1.89
HOMER3-204ENST00000539827 COL9A3Q14050 684 aaPredicted RBP26.86■■□□□ 1.89
HOMER3-204ENST00000539827 RPAP1Q9BWH6 1393 aaPredicted RBP26.85■■□□□ 1.89
HOMER3-204ENST00000539827 PSMA5P28066 241 aa26.85■■□□□ 1.89
HOMER3-204ENST00000539827 TTF1Q15361 905 aaPredicted RBP26.85■■□□□ 1.89
HOMER3-204ENST00000539827 MINPP1Q9UNW1 487 aa26.85■■□□□ 1.89
HOMER3-204ENST00000539827 DSCC1Q9BVC3 393 aa26.84■■□□□ 1.89
HOMER3-204ENST00000539827 WTIPA6NIX2 430 aaPredicted RBP26.84■■□□□ 1.89
HOMER3-204ENST00000539827 HSPD1P10809 573 aaKnown RBP26.84■■□□□ 1.89
HOMER3-204ENST00000539827 GYS1P13807 737 aa26.84■■□□□ 1.89
HOMER3-204ENST00000539827 RPS8P62241 208 aaKnown RBP26.84■■□□□ 1.89
HOMER3-204ENST00000539827 TSGA10IPQ3SY00 556 aa26.84■■□□□ 1.89
HOMER3-204ENST00000539827 SPATA5Q8NB90 893 aa26.84■■□□□ 1.89
HOMER3-204ENST00000539827 APPBP2Q92624 585 aa26.84■■□□□ 1.89
HOMER3-204ENST00000539827 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.84■■□□□ 1.89
HOMER3-204ENST00000539827 MYH7P12883 1935 aa26.84■■□□□ 1.89
HOMER3-204ENST00000539827 RXRBP28702 533 aa26.83■■□□□ 1.89
HOMER3-204ENST00000539827 RASGRF1Q13972 1273 aa26.83■■□□□ 1.89
HOMER3-204ENST00000539827 LIMCH1Q9UPQ0 1083 aa26.83■■□□□ 1.89
HOMER3-204ENST00000539827 MYO5AQ9Y4I1 1855 aaKnown RBP26.83■■□□□ 1.89
HOMER3-204ENST00000539827 A0A1B0GUL6 1792 aa26.83■■□□□ 1.88
HOMER3-204ENST00000539827 IDH1O75874 414 aaKnown RBP26.82■■□□□ 1.88
HOMER3-204ENST00000539827 CYP21A2P08686 494 aa26.82■■□□□ 1.88
HOMER3-204ENST00000539827 MCM4P33991 863 aa26.82■■□□□ 1.88
HOMER3-204ENST00000539827 PUS7LQ9H0K6 701 aaKnown RBP26.82■■□□□ 1.88
HOMER3-204ENST00000539827 TNRC6CQ9HCJ0 1690 aaKnown RBP26.82■■□□□ 1.88
HOMER3-204ENST00000539827 TM4SF1P30408 202 aa26.82■■□□□ 1.88
HOMER3-204ENST00000539827 ADD2P35612 726 aa26.82■■□□□ 1.88
HOMER3-204ENST00000539827 ZSCAN25Q6NSZ9 544 aa26.82■■□□□ 1.88
HOMER3-204ENST00000539827 BLOC1S2Q6QNY1 142 aa26.82■■□□□ 1.88
HOMER3-204ENST00000539827 CNBD1Q8NA66 436 aa26.82■■□□□ 1.88
HOMER3-204ENST00000539827 APBA3O96018 575 aa26.81■■□□□ 1.88
HOMER3-204ENST00000539827 SLC9C2Q5TAH2 1124 aa26.81■■□□□ 1.88
HOMER3-204ENST00000539827 RPS6KB1P23443 525 aa26.8■■□□□ 1.88
HOMER3-204ENST00000539827 UBE4AQ14139 1066 aa26.8■■□□□ 1.88
HOMER3-204ENST00000539827 KRT32Q14532 448 aa26.8■■□□□ 1.88
HOMER3-204ENST00000539827 INTS4Q96HW7 963 aaKnown RBP26.8■■□□□ 1.88
HOMER3-204ENST00000539827 TCEANC2Q96MN5 208 aa26.8■■□□□ 1.88
HOMER3-204ENST00000539827 WWC3Q9ULE0 1092 aa26.8■■□□□ 1.88
HOMER3-204ENST00000539827 A0A0G2JLW4 131 aa26.79■■□□□ 1.88
HOMER3-204ENST00000539827 NUCB2P80303 420 aa26.79■■□□□ 1.88
HOMER3-204ENST00000539827 PKP1Q13835 747 aa26.79■■□□□ 1.88
HOMER3-204ENST00000539827 PRR5LQ6MZQ0 368 aa26.79■■□□□ 1.88
HOMER3-204ENST00000539827 LARGE1O95461 756 aa26.78■■□□□ 1.88
HOMER3-204ENST00000539827 GYG1P46976 350 aa26.78■■□□□ 1.88
HOMER3-204ENST00000539827 IQSEC3Q9UPP2 1182 aaPredicted RBP26.78■■□□□ 1.88
HOMER3-204ENST00000539827 NEK1Q96PY6 1258 aa26.78■■□□□ 1.88
HOMER3-204ENST00000539827 ZNF532Q9HCE3 1301 aa26.77■■□□□ 1.88
HOMER3-204ENST00000539827 PDE6AP16499 860 aa26.77■■□□□ 1.88
HOMER3-204ENST00000539827 GPAA1O43292 621 aa26.77■■□□□ 1.88
HOMER3-204ENST00000539827 SERPINB2P05120 415 aa26.77■■□□□ 1.88
HOMER3-204ENST00000539827 TTLL5Q6EMB2 1281 aa26.77■■□□□ 1.88
HOMER3-204ENST00000539827 STOX1Q6ZVD7 989 aa26.77■■□□□ 1.88
HOMER3-204ENST00000539827 PLSCR1O15162 318 aa26.76■■□□□ 1.87
HOMER3-204ENST00000539827 FOXP2O15409 715 aa26.76■■□□□ 1.87
HOMER3-204ENST00000539827 UBE3CQ15386 1083 aa26.76■■□□□ 1.87
HOMER3-204ENST00000539827 ZNF827Q17R98 1081 aa26.76■■□□□ 1.87
HOMER3-204ENST00000539827 RGS17Q9UGC6 210 aaPredicted RBP26.75■■□□□ 1.87
HOMER3-204ENST00000539827 ZSCAN31Q96LW9 406 aaPredicted RBP26.75■■□□□ 1.87
HOMER3-204ENST00000539827 TFCP2L1Q9NZI6 479 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms