RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 CHPF2Q9P2E5 772 aa9.53□□□□□ -0.88
GNE-205ENST00000539815 C4AP0C0L4 1744 aa9.52□□□□□ -0.88
GNE-205ENST00000539815 DUSP27Q5VZP5 1158 aa9.52□□□□□ -0.88
GNE-205ENST00000539815 JARID2Q92833 1246 aaPredicted RBP9.52□□□□□ -0.89
GNE-205ENST00000539815 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
GNE-205ENST00000539815 GNL3LQ9NVN8 582 aaKnown RBP9.52□□□□□ -0.89
GNE-205ENST00000539815 CSRNP1Q96S65 589 aa9.52□□□□□ -0.89
GNE-205ENST00000539815 LRRFIP2Q9Y608 721 aaKnown RBP9.52□□□□□ -0.89
GNE-205ENST00000539815 CRYBG1Q9Y4K1 1723 aa9.52□□□□□ -0.89
GNE-205ENST00000539815 DDX10Q13206 875 aaKnown RBP9.51□□□□□ -0.89
GNE-205ENST00000539815 RALBP1Q15311 655 aa9.51□□□□□ -0.89
GNE-205ENST00000539815 ANKRD13AQ8IZ07 590 aa9.51□□□□□ -0.89
GNE-205ENST00000539815 TBC1D16Q8TBP0 767 aa9.51□□□□□ -0.89
GNE-205ENST00000539815 CELF1Q92879 486 aaKnown RBP9.51□□□□□ -0.89
GNE-205ENST00000539815 COA1Q9GZY4 146 aa9.51□□□□□ -0.89
GNE-205ENST00000539815 PICK1Q9NRD5 415 aa9.51□□□□□ -0.89
GNE-205ENST00000539815 C5P01031 1676 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 NTSR2O95665 410 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 SLC10A3P09131 477 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 GPSM2P81274 684 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
GNE-205ENST00000539815 ZNF34Q8IZ26 560 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 BRPF3Q9ULD4 1205 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 CCL15-CCL14A0A0B4J2E2 113 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 TFRCP02786 760 aaKnown RBP9.5□□□□□ -0.89
GNE-205ENST00000539815 CCL15Q16663 113 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 LDHAL6AQ6ZMR3 332 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 UBE3BQ7Z3V4 1068 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 CCDC191Q8NCU4 936 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 RUNDC1Q96C34 613 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 LBHD1Q9BQE6 289 aaPredicted RBP9.5□□□□□ -0.89
GNE-205ENST00000539815 LEMD3Q9Y2U8 911 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 C7orf43Q8WVR3 580 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 ZFP91Q96JP5 570 aaPredicted RBP9.5□□□□□ -0.89
GNE-205ENST00000539815 RNF208Q9H0X6 261 aa9.5□□□□□ -0.89
GNE-205ENST00000539815 SCAF8Q9UPN6 1271 aaKnown RBP9.5□□□□□ -0.89
GNE-205ENST00000539815 CRY2Q49AN0 593 aa9.49□□□□□ -0.89
GNE-205ENST00000539815 OTUD5Q96G74 571 aa9.49□□□□□ -0.89
GNE-205ENST00000539815 MON2Q7Z3U7 1717 aa9.49□□□□□ -0.89
GNE-205ENST00000539815 EVI5O60447 810 aa9.49□□□□□ -0.89
GNE-205ENST00000539815 CD99L2Q8TCZ2 262 aa9.49□□□□□ -0.89
GNE-205ENST00000539815 ELP3Q9H9T3 547 aa9.49□□□□□ -0.89
GNE-205ENST00000539815 ISY1Q9ULR0 285 aaKnown RBP9.49□□□□□ -0.89
GNE-205ENST00000539815 JAG2Q9Y219 1238 aa9.49□□□□□ -0.89
GNE-205ENST00000539815 MMP14P50281 582 aa9.48□□□□□ -0.89
GNE-205ENST00000539815 SLC10A5Q5PT55 438 aa9.48□□□□□ -0.89
GNE-205ENST00000539815 DEFB129Q9H1M3 183 aa9.48□□□□□ -0.89
GNE-205ENST00000539815 BABAM1Q9NWV8 329 aa9.48□□□□□ -0.89
GNE-205ENST00000539815 TCP10L2B9ZVM9 353 aa9.48□□□□□ -0.89
GNE-205ENST00000539815 IFIT1P09914 478 aaKnown RBP9.48□□□□□ -0.89
GNE-205ENST00000539815 TMPOP42166 694 aaKnown RBP9.48□□□□□ -0.89
GNE-205ENST00000539815 MOB2Q70IA6 237 aa9.48□□□□□ -0.89
GNE-205ENST00000539815 TRIM47Q96LD4 638 aa9.48□□□□□ -0.89
GNE-205ENST00000539815 TTF2Q9UNY4 1162 aaKnown RBP9.48□□□□□ -0.89
GNE-205ENST00000539815 ABCC12Q96J65 1359 aa9.48□□□□□ -0.89
GNE-205ENST00000539815 CCT4P50991 539 aaKnown RBP9.47□□□□□ -0.89
GNE-205ENST00000539815 ZBTB38Q8NAP3 1195 aaPredicted RBP9.47□□□□□ -0.89
GNE-205ENST00000539815 COA7Q96BR5 231 aa9.47□□□□□ -0.89
GNE-205ENST00000539815 PAPPAQ13219 1627 aa9.47□□□□□ -0.89
GNE-205ENST00000539815 GTF2A2P52657 109 aa9.47□□□□□ -0.89
GNE-205ENST00000539815 OS9Q13438 667 aaPredicted RBP9.47□□□□□ -0.89
GNE-205ENST00000539815 HELBQ8NG08 1087 aaPredicted RBP9.47□□□□□ -0.89
GNE-205ENST00000539815 SEC31BQ9NQW1 1179 aa9.47□□□□□ -0.89
GNE-205ENST00000539815 CTDP1Q9Y5B0 961 aaPredicted RBP9.47□□□□□ -0.89
GNE-205ENST00000539815 N4BP2Q86UW6 1770 aaPredicted RBP9.47□□□□□ -0.89
GNE-205ENST00000539815 WDR90Q96KV7 1748 aa9.46□□□□□ -0.89
GNE-205ENST00000539815 HABP4Q5JVS0 413 aaKnown RBP9.46□□□□□ -0.89
GNE-205ENST00000539815 METTL24Q5JXM2 366 aa9.46□□□□□ -0.89
GNE-205ENST00000539815 STRIP1Q5VSL9 837 aa9.46□□□□□ -0.89
GNE-205ENST00000539815 RASAL3Q86YV0 1011 aa9.46□□□□□ -0.89
GNE-205ENST00000539815 ZNF804BA4D1E1 1349 aa9.46□□□□□ -0.89
GNE-205ENST00000539815 CETPP11597 493 aa9.46□□□□□ -0.89
GNE-205ENST00000539815 PTPN12Q05209 780 aaKnown RBP9.46□□□□□ -0.89
GNE-205ENST00000539815 CFAP100Q494V2 611 aa9.46□□□□□ -0.89
GNE-205ENST00000539815 MAP3K2Q9Y2U5 619 aa9.46□□□□□ -0.89
GNE-205ENST00000539815 CASP8AP2Q9UKL3 1982 aa9.46□□□□□ -0.9
GNE-205ENST00000539815 SF3B3Q15393 1217 aaKnown RBP9.46□□□□□ -0.9
GNE-205ENST00000539815 MFSD14BQ5SR56 506 aa9.46□□□□□ -0.9
GNE-205ENST00000539815 SLF2Q8IX21 1173 aa9.46□□□□□ -0.9
GNE-205ENST00000539815 MAST3O60307 1309 aa9.45□□□□□ -0.9
GNE-205ENST00000539815 ZNF316A6NFI3 1004 aaPredicted RBP9.45□□□□□ -0.9
GNE-205ENST00000539815 DLL1O00548 723 aa9.45□□□□□ -0.9
GNE-205ENST00000539815 TNPO2O14787 897 aaKnown RBP9.45□□□□□ -0.9
GNE-205ENST00000539815 PABPC4Q13310 644 aaKnown RBP eCLIP9.45□□□□□ -0.9
GNE-205ENST00000539815 KLRG2A4D1S0 409 aaPredicted RBP9.45□□□□□ -0.9
GNE-205ENST00000539815 NBPF9Q3BBW0 867 aa9.45□□□□□ -0.9
GNE-205ENST00000539815 CHRDL2Q6WN34 429 aa9.45□□□□□ -0.9
GNE-205ENST00000539815 ZIC5Q96T25 663 aa9.45□□□□□ -0.9
GNE-205ENST00000539815 PCCAP05165 728 aaPredicted RBP9.45□□□□□ -0.9
GNE-205ENST00000539815 SNAPC2Q13487 334 aa9.45□□□□□ -0.9
GNE-205ENST00000539815 GADL1Q6ZQY3 521 aa9.45□□□□□ -0.9
GNE-205ENST00000539815 PI4KAP2A4QPH2 592 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 SLC4A2P04920 1241 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 VIL1P09327 827 aaKnown RBP9.44□□□□□ -0.9
GNE-205ENST00000539815 HOXB7P09629 217 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 HIRAP54198 1017 aaPredicted RBP9.44□□□□□ -0.9
GNE-205ENST00000539815 MAP3K9P80192 1104 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 PDE3AQ14432 1141 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 RASA3Q14644 834 aa9.44□□□□□ -0.9
GNE-205ENST00000539815 SPRYD7Q5W111 196 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms