RNA–Protein interactions for RNA: ENST00000539049.5

DDX11-213, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 3,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-213ENST00000539049 CD248Q9HCU0 757 aa12.65□□□□□ -0.38
DDX11-213ENST00000539049 G2E3Q7L622 706 aa12.64□□□□□ -0.39
DDX11-213ENST00000539049 ZKSCAN4Q969J2 545 aaPredicted RBP12.64□□□□□ -0.39
DDX11-213ENST00000539049 BAG1Q99933 345 aaPredicted RBP12.64□□□□□ -0.39
DDX11-213ENST00000539049 STK31Q9BXU1 1019 aa12.64□□□□□ -0.39
DDX11-213ENST00000539049 SOS1Q07889 1333 aaPredicted RBP12.64□□□□□ -0.39
DDX11-213ENST00000539049 BECN2A8MW95 431 aa12.64□□□□□ -0.39
DDX11-213ENST00000539049 TMCO5BA8MYB1 307 aa12.64□□□□□ -0.39
DDX11-213ENST00000539049 CAPN7Q9Y6W3 813 aa12.64□□□□□ -0.39
DDX11-213ENST00000539049 EME2A4GXA9 379 aaPredicted RBP12.64□□□□□ -0.39
DDX11-213ENST00000539049 SYT1P21579 422 aa12.64□□□□□ -0.39
DDX11-213ENST00000539049 DACT1Q9NYF0 836 aa12.64□□□□□ -0.39
DDX11-213ENST00000539049 ZBTB7BO15156 539 aaPredicted RBP12.63□□□□□ -0.39
DDX11-213ENST00000539049 CPA1P15085 419 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 BRD3Q15059 726 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 PREPLQ4J6C6 727 aaPredicted RBP12.63□□□□□ -0.39
DDX11-213ENST00000539049 KLHL23Q8NBE8 558 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 TEX13AQ9BXU3 409 aaPredicted RBP12.63□□□□□ -0.39
DDX11-213ENST00000539049 FAM204AQ9H8W3 233 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 ARHGEF28Q8N1W1 1705 aaKnown RBP12.63□□□□□ -0.39
DDX11-213ENST00000539049 ANKRD18BA2A2Z9 1011 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 COQ9O75208 318 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 PEX19P40855 299 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 CCT5P48643 541 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 DDR1Q08345 913 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 SARM1Q6SZW1 724 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 SNUPNO95149 360 aaKnown RBP12.63□□□□□ -0.39
DDX11-213ENST00000539049 AIMP1Q12904 312 aaKnown RBP12.63□□□□□ -0.39
DDX11-213ENST00000539049 SIRT2Q8IXJ6 389 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 FAM71BQ8TC56 605 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 RABGGTAQ92696 567 aa12.63□□□□□ -0.39
DDX11-213ENST00000539049 ZNF330Q9Y3S2 320 aaPredicted RBP12.63□□□□□ -0.39
DDX11-213ENST00000539049 NAA25Q14CX7 972 aa12.62□□□□□ -0.39
DDX11-213ENST00000539049 KIF9Q9HAQ2 790 aa12.62□□□□□ -0.39
DDX11-213ENST00000539049 CCP110O43303 1012 aa12.62□□□□□ -0.39
DDX11-213ENST00000539049 CEBPAP49715 358 aaPredicted RBP12.62□□□□□ -0.39
DDX11-213ENST00000539049 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
DDX11-213ENST00000539049 PPP2R3AQ06190 1150 aa12.62□□□□□ -0.39
DDX11-213ENST00000539049 ARMC3Q5W041 872 aa12.62□□□□□ -0.39
DDX11-213ENST00000539049 RPUSD2Q8IZ73 545 aaKnown RBP12.62□□□□□ -0.39
DDX11-213ENST00000539049 TCEANC2Q96MN5 208 aa12.62□□□□□ -0.39
DDX11-213ENST00000539049 API5Q9BZZ5 524 aaKnown RBP12.62□□□□□ -0.39
DDX11-213ENST00000539049 SKAP2O75563 359 aaPredicted RBP12.61□□□□□ -0.39
DDX11-213ENST00000539049 CAVIN2O95810 425 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 SFPQP23246 707 aaKnown RBP eCLIP12.61□□□□□ -0.39
DDX11-213ENST00000539049 RPS6KA3P51812 740 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 TRIM74Q86UV6 250 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 TRIM73Q86UV7 250 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 PARD3BQ8TEW8 1205 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 GOLGA1Q92805 767 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 SUDS3Q9H7L9 328 aaPredicted RBP12.61□□□□□ -0.39
DDX11-213ENST00000539049 SMC3Q9UQE7 1217 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 RGS12O14924 1447 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 CAMSAP1Q5T5Y3 1602 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 ERLIN1O75477 346 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 FCHSD2O94868 740 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 ICA1Q05084 483 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 VPS53Q5VIR6 699 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 MRPL50Q8N5N7 158 aaKnown RBP12.61□□□□□ -0.39
DDX11-213ENST00000539049 MICAL1Q8TDZ2 1067 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 CLIC6Q96NY7 704 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 RTL1A6NKG5 1358 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 VPS37CA5D8V6 355 aaPredicted RBP12.61□□□□□ -0.39
DDX11-213ENST00000539049 NAP1L1P55209 391 aaKnown RBP12.61□□□□□ -0.39
DDX11-213ENST00000539049 ANKRD23Q86SG2 305 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 FERMT3Q86UX7 667 aa12.61□□□□□ -0.39
DDX11-213ENST00000539049 DDX19AQ9NUU7 478 aaKnown RBP12.61□□□□□ -0.39
DDX11-213ENST00000539049 SURF6O75683 361 aaKnown RBP12.6□□□□□ -0.39
DDX11-213ENST00000539049 GNAI3P08754 354 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 PDCD2Q16342 344 aaPredicted RBP12.6□□□□□ -0.39
DDX11-213ENST00000539049 C1QTNF12Q5T7M4 302 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 AFAP1L1Q8TED9 768 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
DDX11-213ENST00000539049 DNAJC5Q9H3Z4 198 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 PALD1Q9ULE6 856 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 PARP3Q9Y6F1 533 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 RTN2O75298 545 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 FAM177A1Q8N128 213 aaPredicted RBP12.6□□□□□ -0.39
DDX11-213ENST00000539049 ZBTB10Q96DT7 871 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 MYO1FO00160 1098 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 TXLNAP40222 546 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 CEP57Q86XR8 500 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 CEP112Q8N8E3 955 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 CCDC150Q8NCX0 1101 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 ABCC3O15438 1527 aa12.6□□□□□ -0.39
DDX11-213ENST00000539049 NFXL1Q6ZNB6 911 aa12.59□□□□□ -0.39
DDX11-213ENST00000539049 CENPHQ9H3R5 247 aa12.59□□□□□ -0.39
DDX11-213ENST00000539049 FRMPD1Q5SYB0 1578 aa12.59□□□□□ -0.39
DDX11-213ENST00000539049 NEXMIFQ5QGS0 1516 aa12.59□□□□□ -0.39
DDX11-213ENST00000539049 SIL1Q9H173 461 aa12.59□□□□□ -0.39
DDX11-213ENST00000539049 MED14O60244 1454 aa12.59□□□□□ -0.39
DDX11-213ENST00000539049 KRT85P78386 507 aa12.58□□□□□ -0.39
DDX11-213ENST00000539049 SNX1Q13596 522 aa12.58□□□□□ -0.39
DDX11-213ENST00000539049 SPG7Q9UQ90 795 aa12.58□□□□□ -0.39
DDX11-213ENST00000539049 MAFGO15525 162 aa12.58□□□□□ -0.4
DDX11-213ENST00000539049 KIAA0754O94854 1291 aa12.58□□□□□ -0.4
DDX11-213ENST00000539049 NLRP6P59044 892 aa12.58□□□□□ -0.4
DDX11-213ENST00000539049 RSRC2Q7L4I2 434 aaKnown RBP12.58□□□□□ -0.4
DDX11-213ENST00000539049 KIRREL3Q8IZU9 778 aa12.58□□□□□ -0.4
DDX11-213ENST00000539049 LRRC7Q96NW7 1537 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms