RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 TICAM2Q86XR7 235 aa29.41■■■□□ 2.3
RAB40C-204ENST00000538492 GREM2Q9H772 168 aa29.41■■■□□ 2.3
RAB40C-204ENST00000538492 PPFIA3O75145 1194 aa29.41■■■□□ 2.3
RAB40C-204ENST00000538492 CAMK4Q16566 473 aa29.41■■■□□ 2.3
RAB40C-204ENST00000538492 LEO1Q8WVC0 666 aaPredicted RBP29.41■■■□□ 2.3
RAB40C-204ENST00000538492 GOLGA6L4A6NEF3 574 aa29.4■■■□□ 2.3
RAB40C-204ENST00000538492 ITGA6P23229 1130 aa29.4■■■□□ 2.3
RAB40C-204ENST00000538492 ZBTB1Q9Y2K1 713 aa29.4■■■□□ 2.3
RAB40C-204ENST00000538492 METTL24Q5JXM2 366 aa29.4■■■□□ 2.3
RAB40C-204ENST00000538492 LDHAL6AQ6ZMR3 332 aa29.4■■■□□ 2.3
RAB40C-204ENST00000538492 MPNDQ8N594 471 aa29.4■■■□□ 2.3
RAB40C-204ENST00000538492 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.4■■■□□ 2.3
RAB40C-204ENST00000538492 CYP19A1P11511 503 aaPredicted RBP29.39■■■□□ 2.3
RAB40C-204ENST00000538492 TTLL11Q8NHH1 800 aa29.39■■■□□ 2.3
RAB40C-204ENST00000538492 NCOA5Q9HCD5 579 aaKnown RBP29.39■■■□□ 2.3
RAB40C-204ENST00000538492 RESTQ13127 1097 aa29.39■■■□□ 2.29
RAB40C-204ENST00000538492 NSUN7Q8NE18 718 aaKnown RBP29.39■■■□□ 2.29
RAB40C-204ENST00000538492 SMARCC2Q8TAQ2 1214 aa29.39■■■□□ 2.29
RAB40C-204ENST00000538492 CTDNEP1O95476 244 aa29.38■■■□□ 2.29
RAB40C-204ENST00000538492 HAND2P61296 217 aa29.38■■■□□ 2.29
RAB40C-204ENST00000538492 BCL9O00512 1426 aa29.38■■■□□ 2.29
RAB40C-204ENST00000538492 ATP2B3Q16720 1220 aa29.38■■■□□ 2.29
RAB40C-204ENST00000538492 RIC1Q4ADV7 1423 aa29.37■■■□□ 2.29
RAB40C-204ENST00000538492 FOXP2O15409 715 aa29.37■■■□□ 2.29
RAB40C-204ENST00000538492 LLPHQ9BRT6 129 aaKnown RBP29.37■■■□□ 2.29
RAB40C-204ENST00000538492 AGXT2Q9BYV1 514 aa29.37■■■□□ 2.29
RAB40C-204ENST00000538492 NUP62CLQ9H1M0 184 aa29.37■■■□□ 2.29
RAB40C-204ENST00000538492 DACT1Q9NYF0 836 aa29.37■■■□□ 2.29
RAB40C-204ENST00000538492 RIPOR2Q9Y4F9 1068 aa29.37■■■□□ 2.29
RAB40C-204ENST00000538492 PTPDC1A2A3K4 754 aa29.36■■■□□ 2.29
RAB40C-204ENST00000538492 ADCY5O95622 1261 aa29.36■■■□□ 2.29
RAB40C-204ENST00000538492 LRRFIP1Q32MZ4 808 aaKnown RBP29.36■■■□□ 2.29
RAB40C-204ENST00000538492 PUS7LQ9H0K6 701 aaKnown RBP29.36■■■□□ 2.29
RAB40C-204ENST00000538492 TRMT112Q9UI30 125 aaKnown RBP29.36■■■□□ 2.29
RAB40C-204ENST00000538492 CDHR2Q9BYE9 1310 aa29.36■■■□□ 2.29
RAB40C-204ENST00000538492 CTSWP56202 376 aa29.36■■■□□ 2.29
RAB40C-204ENST00000538492 PLCB2Q00722 1185 aa29.36■■■□□ 2.29
RAB40C-204ENST00000538492 CNNM1Q9NRU3 951 aa29.36■■■□□ 2.29
RAB40C-204ENST00000538492 TBC1D2BQ9UPU7 963 aa29.36■■■□□ 2.29
RAB40C-204ENST00000538492 IRS4O14654 1257 aaPredicted RBP29.35■■■□□ 2.29
RAB40C-204ENST00000538492 ZNF500O60304 480 aaPredicted RBP29.35■■■□□ 2.29
RAB40C-204ENST00000538492 ZFYP08048 801 aaPredicted RBP29.34■■■□□ 2.29
RAB40C-204ENST00000538492 DISP2A7MBM2 1401 aa29.34■■■□□ 2.29
RAB40C-204ENST00000538492 OFD1O75665 1012 aa29.34■■■□□ 2.29
RAB40C-204ENST00000538492 CCDC192P0DO97 292 aa29.34■■■□□ 2.29
RAB40C-204ENST00000538492 CEBPZQ03701 1054 aaKnown RBP29.34■■■□□ 2.29
RAB40C-204ENST00000538492 PGBD1Q96JS3 809 aa29.34■■■□□ 2.29
RAB40C-204ENST00000538492 GPHNQ9NQX3 736 aaPredicted RBP29.34■■■□□ 2.29
RAB40C-204ENST00000538492 ANKRD18BA2A2Z9 1011 aa29.33■■■□□ 2.29
RAB40C-204ENST00000538492 EXOC5O00471 708 aa29.33■■■□□ 2.29
RAB40C-204ENST00000538492 PDIA3P30101 505 aaKnown RBP29.33■■■□□ 2.29
RAB40C-204ENST00000538492 MCAMP43121 646 aa29.33■■■□□ 2.29
RAB40C-204ENST00000538492 MAP3K11Q16584 847 aa29.33■■■□□ 2.29
RAB40C-204ENST00000538492 NWD2Q9ULI1 1742 aa29.33■■■□□ 2.29
RAB40C-204ENST00000538492 FGAP02671 866 aa29.33■■■□□ 2.29
RAB40C-204ENST00000538492 CKAP2LQ8IYA6 745 aa29.33■■■□□ 2.29
RAB40C-204ENST00000538492 ZSCAN16Q9H4T2 348 aaPredicted RBP29.33■■■□□ 2.29
RAB40C-204ENST00000538492 LRP6O75581 1613 aa29.32■■■□□ 2.28
RAB40C-204ENST00000538492 KDM4AO75164 1064 aa29.32■■■□□ 2.28
RAB40C-204ENST00000538492 APPBP2Q92624 585 aa29.32■■■□□ 2.28
RAB40C-204ENST00000538492 IMMTQ16891 758 aaKnown RBP29.32■■■□□ 2.28
RAB40C-204ENST00000538492 BICD2Q8TD16 824 aa29.32■■■□□ 2.28
RAB40C-204ENST00000538492 CTNNA3Q9UI47 895 aa29.32■■■□□ 2.28
RAB40C-204ENST00000538492 MCM5P33992 734 aa29.31■■■□□ 2.28
RAB40C-204ENST00000538492 TNMDQ9H2S6 317 aa29.31■■■□□ 2.28
RAB40C-204ENST00000538492 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP29.31■■■□□ 2.28
RAB40C-204ENST00000538492 DZIP3Q86Y13 1208 aaKnown RBP29.31■■■□□ 2.28
RAB40C-204ENST00000538492 MYH3P11055 1940 aa29.31■■■□□ 2.28
RAB40C-204ENST00000538492 A0A0G2JS52 829 aa29.3■■■□□ 2.28
RAB40C-204ENST00000538492 HMGN5P82970 282 aaKnown RBP29.3■■■□□ 2.28
RAB40C-204ENST00000538492 NUP98P52948 1817 aa29.3■■■□□ 2.28
RAB40C-204ENST00000538492 NR1I2O75469 434 aa29.3■■■□□ 2.28
RAB40C-204ENST00000538492 ZNF274Q96GC6 653 aaPredicted RBP29.3■■■□□ 2.28
RAB40C-204ENST00000538492 GUCY1B3Q02153 619 aa29.29■■■□□ 2.28
RAB40C-204ENST00000538492 ANKRD36CQ5JPF3 1778 aa29.29■■■□□ 2.28
RAB40C-204ENST00000538492 ZNF830Q96NB3 372 aaPredicted RBP29.29■■■□□ 2.28
RAB40C-204ENST00000538492 GPAA1O43292 621 aa29.29■■■□□ 2.28
RAB40C-204ENST00000538492 PDZRN4Q6ZMN7 1036 aaPredicted RBP29.29■■■□□ 2.28
RAB40C-204ENST00000538492 FTOQ9C0B1 505 aaKnown RBP eCLIP29.29■■■□□ 2.28
RAB40C-204ENST00000538492 MYH7P12883 1935 aa29.29■■■□□ 2.28
RAB40C-204ENST00000538492 UBN2Q6ZU65 1347 aa29.28■■■□□ 2.28
RAB40C-204ENST00000538492 NAA16Q6N069 864 aaPredicted RBP29.28■■■□□ 2.28
RAB40C-204ENST00000538492 CFAP45Q9UL16 551 aa29.28■■■□□ 2.28
RAB40C-204ENST00000538492 AKAP11Q9UKA4 1901 aa29.28■■■□□ 2.28
RAB40C-204ENST00000538492 COL14A1Q05707 1796 aaKnown RBP29.28■■■□□ 2.28
RAB40C-204ENST00000538492 AP5Z1O43299 807 aa29.28■■■□□ 2.28
RAB40C-204ENST00000538492 KLHL34Q8N239 644 aa29.28■■■□□ 2.28
RAB40C-204ENST00000538492 SALL1Q9NSC2 1324 aa29.27■■■□□ 2.28
RAB40C-204ENST00000538492 TYRO3Q06418 890 aa29.27■■■□□ 2.28
RAB40C-204ENST00000538492 VGLL2Q8N8G2 317 aa29.27■■■□□ 2.28
RAB40C-204ENST00000538492 DDX19AQ9NUU7 478 aaKnown RBP29.27■■■□□ 2.28
RAB40C-204ENST00000538492 KIF3AQ9Y496 699 aa29.27■■■□□ 2.28
RAB40C-204ENST00000538492 PDE8AO60658 829 aa29.26■■■□□ 2.28
RAB40C-204ENST00000538492 ADD1P35611 737 aaKnown RBP29.26■■■□□ 2.28
RAB40C-204ENST00000538492 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.26■■■□□ 2.28
RAB40C-204ENST00000538492 MRVI1Q9Y6F6 885 aa29.26■■■□□ 2.28
RAB40C-204ENST00000538492 ABCC12Q96J65 1359 aa29.26■■■□□ 2.27
RAB40C-204ENST00000538492 SLC9C2Q5TAH2 1124 aa29.26■■■□□ 2.27
RAB40C-204ENST00000538492 HELBQ8NG08 1087 aaPredicted RBP29.26■■■□□ 2.27
RAB40C-204ENST00000538492 PRC1O43663 620 aa29.25■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms