RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
VPS37C-204ENST00000538036 GPR25O00155 361 aa13.19□□□□□ -0.3
VPS37C-204ENST00000538036 TBC1D8O95759 1140 aa13.19□□□□□ -0.3
VPS37C-204ENST00000538036 TTLL12Q14166 644 aaPredicted RBP13.19□□□□□ -0.3
VPS37C-204ENST00000538036 NBPF9Q3BBW0 867 aa13.19□□□□□ -0.3
VPS37C-204ENST00000538036 DACT2Q5SW24 774 aa13.19□□□□□ -0.3
VPS37C-204ENST00000538036 FBXO46Q6PJ61 603 aaPredicted RBP13.19□□□□□ -0.3
VPS37C-204ENST00000538036 COA1Q9GZY4 146 aa13.19□□□□□ -0.3
VPS37C-204ENST00000538036 WNT10BO00744 389 aa13.18□□□□□ -0.3
VPS37C-204ENST00000538036 ALDH1A1P00352 501 aa13.18□□□□□ -0.3
VPS37C-204ENST00000538036 CTSWP56202 376 aa13.18□□□□□ -0.3
VPS37C-204ENST00000538036 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
VPS37C-204ENST00000538036 MOB2Q70IA6 237 aa13.18□□□□□ -0.3
VPS37C-204ENST00000538036 ARMC9Q7Z3E5 817 aa13.18□□□□□ -0.3
VPS37C-204ENST00000538036 CCDC85AQ96PX6 553 aaPredicted RBP13.18□□□□□ -0.3
VPS37C-204ENST00000538036 MINPP1Q9UNW1 487 aa13.18□□□□□ -0.3
VPS37C-204ENST00000538036 LEMD3Q9Y2U8 911 aa13.18□□□□□ -0.3
VPS37C-204ENST00000538036 FKTNO75072 461 aa13.17□□□□□ -0.3
VPS37C-204ENST00000538036 CCT4P50991 539 aaKnown RBP13.17□□□□□ -0.3
VPS37C-204ENST00000538036 INHBEP58166 350 aa13.17□□□□□ -0.3
VPS37C-204ENST00000538036 PRAMEF18Q5VWM3 479 aa13.17□□□□□ -0.3
VPS37C-204ENST00000538036 APOBEC3FQ8IUX4 373 aaKnown RBP13.17□□□□□ -0.3
VPS37C-204ENST00000538036 TTLL11Q8NHH1 800 aa13.17□□□□□ -0.3
VPS37C-204ENST00000538036 ELL2O00472 640 aaPredicted RBP13.16□□□□□ -0.3
VPS37C-204ENST00000538036 NEXNQ0ZGT2 675 aa13.16□□□□□ -0.3
VPS37C-204ENST00000538036 LDLRAD1Q5T700 205 aa13.16□□□□□ -0.3
VPS37C-204ENST00000538036 KSR2Q6VAB6 950 aa13.16□□□□□ -0.3
VPS37C-204ENST00000538036 JARID2Q92833 1246 aaPredicted RBP13.16□□□□□ -0.3
VPS37C-204ENST00000538036 GCC1Q96CN9 775 aa13.16□□□□□ -0.3
VPS37C-204ENST00000538036 ANKRD2Q9GZV1 360 aa13.16□□□□□ -0.3
VPS37C-204ENST00000538036 MAP3K2Q9Y2U5 619 aa13.16□□□□□ -0.3
VPS37C-204ENST00000538036 UNCXA6NJT0 531 aa13.15□□□□□ -0.3
VPS37C-204ENST00000538036 PTPN12Q05209 780 aaKnown RBP13.15□□□□□ -0.3
VPS37C-204ENST00000538036 TTLL5Q6EMB2 1281 aa13.15□□□□□ -0.3
VPS37C-204ENST00000538036 SCAF8Q9UPN6 1271 aaKnown RBP13.15□□□□□ -0.3
VPS37C-204ENST00000538036 PSME4Q14997 1843 aa13.14□□□□□ -0.31
VPS37C-204ENST00000538036 MANSC4A6NHS7 340 aaPredicted RBP13.14□□□□□ -0.31
VPS37C-204ENST00000538036 WTIPA6NIX2 430 aaPredicted RBP13.14□□□□□ -0.31
VPS37C-204ENST00000538036 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
VPS37C-204ENST00000538036 IGHMBP2P38935 993 aaKnown RBP13.14□□□□□ -0.31
VPS37C-204ENST00000538036 SPRYD7Q5W111 196 aa13.14□□□□□ -0.31
VPS37C-204ENST00000538036 INTS3Q68E01 1043 aaKnown RBP13.14□□□□□ -0.31
VPS37C-204ENST00000538036 C8orf58Q8NAV2 365 aa13.14□□□□□ -0.31
VPS37C-204ENST00000538036 GREM2Q9H772 168 aa13.14□□□□□ -0.31
VPS37C-204ENST00000538036 PI4KAP2A4QPH2 592 aa13.13□□□□□ -0.31
VPS37C-204ENST00000538036 APAF1O14727 1248 aa13.13□□□□□ -0.31
VPS37C-204ENST00000538036 PI4KAP1Q8N8J0 262 aa13.13□□□□□ -0.31
VPS37C-204ENST00000538036 FBXW7Q969H0 707 aa13.13□□□□□ -0.31
VPS37C-204ENST00000538036 SLC10A4Q96EP9 437 aa13.13□□□□□ -0.31
VPS37C-204ENST00000538036 ZBED3Q96IU2 234 aaPredicted RBP13.13□□□□□ -0.31
VPS37C-204ENST00000538036 MXD3Q9BW11 206 aa13.13□□□□□ -0.31
VPS37C-204ENST00000538036 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
VPS37C-204ENST00000538036 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
VPS37C-204ENST00000538036 H7C1W4 665 aa13.12□□□□□ -0.31
VPS37C-204ENST00000538036 PPP1R12BO60237 982 aaPredicted RBP13.12□□□□□ -0.31
VPS37C-204ENST00000538036 SASH1O94885 1247 aa13.12□□□□□ -0.31
VPS37C-204ENST00000538036 ZBTB48P10074 688 aaPredicted RBP13.12□□□□□ -0.31
VPS37C-204ENST00000538036 MKRN3Q13064 507 aaKnown RBP13.12□□□□□ -0.31
VPS37C-204ENST00000538036 DDX10Q13206 875 aaKnown RBP13.12□□□□□ -0.31
VPS37C-204ENST00000538036 MAP3K11Q16584 847 aa13.12□□□□□ -0.31
VPS37C-204ENST00000538036 TXNRD3Q86VQ6 643 aa13.12□□□□□ -0.31
VPS37C-204ENST00000538036 KIAA0825Q8IV33 1275 aa13.12□□□□□ -0.31
VPS37C-204ENST00000538036 MPHOSPH8Q99549 860 aa13.12□□□□□ -0.31
VPS37C-204ENST00000538036 PLA2G12BQ9BX93 195 aa13.12□□□□□ -0.31
VPS37C-204ENST00000538036 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
VPS37C-204ENST00000538036 DEFB129Q9H1M3 183 aa13.12□□□□□ -0.31
VPS37C-204ENST00000538036 ANGEL1Q9UNK9 670 aaKnown RBP13.12□□□□□ -0.31
VPS37C-204ENST00000538036 PPP2R3BQ9Y5P8 575 aa13.12□□□□□ -0.31
VPS37C-204ENST00000538036 NEURL1BA8MQ27 555 aa13.11□□□□□ -0.31
VPS37C-204ENST00000538036 DLGAP5Q15398 846 aa13.11□□□□□ -0.31
VPS37C-204ENST00000538036 SUPT20HL1Q3ZLR7 823 aa13.11□□□□□ -0.31
VPS37C-204ENST00000538036 IFNL1Q8IU54 200 aa13.11□□□□□ -0.31
VPS37C-204ENST00000538036 MTMR14Q8NCE2 650 aa13.11□□□□□ -0.31
VPS37C-204ENST00000538036 ITGA6P23229 1130 aa13.1□□□□□ -0.31
VPS37C-204ENST00000538036 GTF2IP78347 998 aa13.1□□□□□ -0.31
VPS37C-204ENST00000538036 PRKG1Q13976 671 aa13.1□□□□□ -0.31
VPS37C-204ENST00000538036 OTUD7BQ6GQQ9 843 aa13.1□□□□□ -0.31
VPS37C-204ENST00000538036 UBE3BQ7Z3V4 1068 aa13.1□□□□□ -0.31
VPS37C-204ENST00000538036 R3HDMLQ9H3Y0 253 aa13.1□□□□□ -0.31
VPS37C-204ENST00000538036 MYO1BO43795 1136 aa13.09□□□□□ -0.31
VPS37C-204ENST00000538036 CSF1RP07333 972 aa13.09□□□□□ -0.31
VPS37C-204ENST00000538036 KCNJ4P48050 445 aa13.09□□□□□ -0.31
VPS37C-204ENST00000538036 FKBP1AP62942 108 aaKnown RBP13.09□□□□□ -0.31
VPS37C-204ENST00000538036 CWF19L2Q2TBE0 894 aaKnown RBP13.09□□□□□ -0.31
VPS37C-204ENST00000538036 C15orf52Q6ZUT6 534 aaKnown RBP13.09□□□□□ -0.31
VPS37C-204ENST00000538036 TSPYL6Q8N831 410 aa13.09□□□□□ -0.31
VPS37C-204ENST00000538036 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
VPS37C-204ENST00000538036 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
VPS37C-204ENST00000538036 CD209Q9NNX6 404 aa13.09□□□□□ -0.31
VPS37C-204ENST00000538036 TRIM17Q9Y577 477 aa13.09□□□□□ -0.31
VPS37C-204ENST00000538036 GCKRQ14397 625 aa13.08□□□□□ -0.32
VPS37C-204ENST00000538036 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
VPS37C-204ENST00000538036 WNK4Q96J92 1243 aa13.08□□□□□ -0.32
VPS37C-204ENST00000538036 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
VPS37C-204ENST00000538036 KLRK1P26718 216 aa13.07□□□□□ -0.32
VPS37C-204ENST00000538036 IREB2P48200 963 aaKnown RBP13.07□□□□□ -0.32
VPS37C-204ENST00000538036 CHRNDQ07001 517 aa13.07□□□□□ -0.32
VPS37C-204ENST00000538036 PRKRIP1Q9H875 184 aaPredicted RBP13.07□□□□□ -0.32
VPS37C-204ENST00000538036 ANKRD18BA2A2Z9 1011 aa13.06□□□□□ -0.32
VPS37C-204ENST00000538036 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms