RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 STK3Q13188 491 aa20.8■□□□□ 0.92
SNX17-210ENST00000537606 CCDC102BQ68D86 513 aa20.8■□□□□ 0.92
SNX17-210ENST00000537606 TTLL5Q6EMB2 1281 aa20.8■□□□□ 0.92
SNX17-210ENST00000537606 AK7Q96M32 723 aa20.8■□□□□ 0.92
SNX17-210ENST00000537606 ZNF652Q9Y2D9 606 aa20.8■□□□□ 0.92
SNX17-210ENST00000537606 SPATA31A6Q5VVP1 1343 aa20.8■□□□□ 0.92
SNX17-210ENST00000537606 GJB2P29033 226 aa20.8■□□□□ 0.92
SNX17-210ENST00000537606 PUS7LQ9H0K6 701 aaKnown RBP20.8■□□□□ 0.92
SNX17-210ENST00000537606 SH2B1Q9NRF2 756 aaPredicted RBP20.8■□□□□ 0.92
SNX17-210ENST00000537606 SYT1P21579 422 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 HSPA1LP34931 641 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 ERFEQ4G0M1 354 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 CCDC152Q4G0S7 254 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 SRP68Q9UHB9 627 aaKnown RBP20.79■□□□□ 0.92
SNX17-210ENST00000537606 EP400Q96L91 3159 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 KRT32Q14532 448 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 PUM3Q15397 648 aaKnown RBP20.79■□□□□ 0.92
SNX17-210ENST00000537606 C3orf67Q6ZVT6 689 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 DSCC1Q9BVC3 393 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 GDPD2Q9HCC8 539 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 MROH5Q6ZUA9 1318 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 RREB1Q92766 1687 aa20.79■□□□□ 0.92
SNX17-210ENST00000537606 WDR33Q9C0J8 1336 aaKnown RBP20.78■□□□□ 0.92
SNX17-210ENST00000537606 LPIN2Q92539 896 aa20.78■□□□□ 0.92
SNX17-210ENST00000537606 GJD4Q96KN9 370 aaPredicted RBP20.78■□□□□ 0.92
SNX17-210ENST00000537606 FGFR2P21802 821 aa20.77■□□□□ 0.92
SNX17-210ENST00000537606 TBC1D9BQ66K14 1250 aa20.77■□□□□ 0.92
SNX17-210ENST00000537606 Q6ZUG5 572 aa20.77■□□□□ 0.92
SNX17-210ENST00000537606 AMIGO3Q86WK7 504 aa20.77■□□□□ 0.92
SNX17-210ENST00000537606 PIH1D3Q9NQM4 214 aaKnown RBP20.77■□□□□ 0.92
SNX17-210ENST00000537606 COL5A3P25940 1745 aaPredicted RBP20.77■□□□□ 0.92
SNX17-210ENST00000537606 GNPATO15228 680 aa20.77■□□□□ 0.92
SNX17-210ENST00000537606 STX6O43752 255 aa20.77■□□□□ 0.92
SNX17-210ENST00000537606 IDH1O75874 414 aaKnown RBP20.77■□□□□ 0.92
SNX17-210ENST00000537606 CLEC4GQ6UXB4 293 aa20.77■□□□□ 0.92
SNX17-210ENST00000537606 BCL2L12Q9HB09 334 aa20.77■□□□□ 0.92
SNX17-210ENST00000537606 CCNL1Q9UK58 526 aaPredicted RBP20.77■□□□□ 0.92
SNX17-210ENST00000537606 IGHMBP2P38935 993 aaKnown RBP20.76■□□□□ 0.91
SNX17-210ENST00000537606 ANKRD1Q15327 319 aa20.76■□□□□ 0.91
SNX17-210ENST00000537606 CCDC24Q8N4L8 307 aa20.76■□□□□ 0.91
SNX17-210ENST00000537606 CERKQ8TCT0 537 aa20.76■□□□□ 0.91
SNX17-210ENST00000537606 AFF2P51816 1311 aa20.76■□□□□ 0.91
SNX17-210ENST00000537606 FOXP2O15409 715 aa20.76■□□□□ 0.91
SNX17-210ENST00000537606 ZSCAN23Q3MJ62 389 aa20.76■□□□□ 0.91
SNX17-210ENST00000537606 SLC9C2Q5TAH2 1124 aa20.76■□□□□ 0.91
SNX17-210ENST00000537606 ZFYP08048 801 aaPredicted RBP20.75■□□□□ 0.91
SNX17-210ENST00000537606 GTF2E1P29083 439 aaPredicted RBP20.75■□□□□ 0.91
SNX17-210ENST00000537606 HAND2P61296 217 aa20.75■□□□□ 0.91
SNX17-210ENST00000537606 LRRFIP1Q32MZ4 808 aaKnown RBP20.75■□□□□ 0.91
SNX17-210ENST00000537606 CHST3Q7LGC8 479 aa20.75■□□□□ 0.91
SNX17-210ENST00000537606 APPBP2Q92624 585 aa20.75■□□□□ 0.91
SNX17-210ENST00000537606 CNTNAP4Q9C0A0 1308 aa20.75■□□□□ 0.91
SNX17-210ENST00000537606 DDX60Q8IY21 1712 aaKnown RBP20.75■□□□□ 0.91
SNX17-210ENST00000537606 AKAP11Q9UKA4 1901 aa20.75■□□□□ 0.91
SNX17-210ENST00000537606 WTIPA6NIX2 430 aaPredicted RBP20.75■□□□□ 0.91
SNX17-210ENST00000537606 ZSCAN22P10073 491 aaPredicted RBP20.75■□□□□ 0.91
SNX17-210ENST00000537606 SPEF2Q9C093 1822 aa20.75■□□□□ 0.91
SNX17-210ENST00000537606 SLC5A1P13866 664 aa20.74■□□□□ 0.91
SNX17-210ENST00000537606 FGD1P98174 961 aa20.74■□□□□ 0.91
SNX17-210ENST00000537606 E7EWF7 191 aa20.74■□□□□ 0.91
SNX17-210ENST00000537606 GPAA1O43292 621 aa20.74■□□□□ 0.91
SNX17-210ENST00000537606 BCAMP50895 628 aa20.74■□□□□ 0.91
SNX17-210ENST00000537606 TICAM2Q86XR7 235 aa20.74■□□□□ 0.91
SNX17-210ENST00000537606 BRF1Q92994 677 aa20.74■□□□□ 0.91
SNX17-210ENST00000537606 ZNF512BQ96KM6 892 aaPredicted RBP20.74■□□□□ 0.91
SNX17-210ENST00000537606 ALDH8A1Q9H2A2 487 aaPredicted RBP20.74■□□□□ 0.91
SNX17-210ENST00000537606 COL4A1P02462 1669 aa20.74■□□□□ 0.91
SNX17-210ENST00000537606 ABCC12Q96J65 1359 aa20.73■□□□□ 0.91
SNX17-210ENST00000537606 HSP90B1P14625 803 aaKnown RBP20.73■□□□□ 0.91
SNX17-210ENST00000537606 ARID4AP29374 1257 aaPredicted RBP20.73■□□□□ 0.91
SNX17-210ENST00000537606 CHRNDQ07001 517 aa20.73■□□□□ 0.91
SNX17-210ENST00000537606 TPRNQ4KMQ1 711 aa20.73■□□□□ 0.91
SNX17-210ENST00000537606 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.73■□□□□ 0.918e-8■■■■□ 25
SNX17-210ENST00000537606 TMEM63CQ9P1W3 806 aa20.73■□□□□ 0.91
SNX17-210ENST00000537606 ISY1Q9ULR0 285 aaKnown RBP20.73■□□□□ 0.91
SNX17-210ENST00000537606 CICQ96RK0 1608 aaPredicted RBP20.73■□□□□ 0.91
SNX17-210ENST00000537606 RPS6KA4O75676 772 aa20.73■□□□□ 0.91
SNX17-210ENST00000537606 FGAP02671 866 aa20.73■□□□□ 0.91
SNX17-210ENST00000537606 WWC3Q9ULE0 1092 aa20.73■□□□□ 0.91
SNX17-210ENST00000537606 BTAF1O14981 1849 aa20.72■□□□□ 0.91
SNX17-210ENST00000537606 VPS37CA5D8V6 355 aaPredicted RBP20.72■□□□□ 0.91
SNX17-210ENST00000537606 ADD2P35612 726 aa20.72■□□□□ 0.91
SNX17-210ENST00000537606 RASGRF1Q13972 1273 aa20.72■□□□□ 0.91
SNX17-210ENST00000537606 GADD45BO75293 160 aaPredicted RBP20.72■□□□□ 0.91
SNX17-210ENST00000537606 PHF14O94880 888 aa20.72■□□□□ 0.91
SNX17-210ENST00000537606 UQCRFS1P1P0C7P4 283 aa20.72■□□□□ 0.91
SNX17-210ENST00000537606 DHX32Q7L7V1 743 aaKnown RBP20.72■□□□□ 0.91
SNX17-210ENST00000537606 SPATA5Q8NB90 893 aa20.72■□□□□ 0.91
SNX17-210ENST00000537606 MYO5AQ9Y4I1 1855 aaKnown RBP20.72■□□□□ 0.91
SNX17-210ENST00000537606 SEPT12Q8IYM1 358 aa20.71■□□□□ 0.91
SNX17-210ENST00000537606 NARFQ9UHQ1 456 aa20.71■□□□□ 0.91
SNX17-210ENST00000537606 IQSEC3Q9UPP2 1182 aaPredicted RBP20.71■□□□□ 0.91
SNX17-210ENST00000537606 MTMR6Q9Y217 621 aa20.71■□□□□ 0.91
SNX17-210ENST00000537606 ZNF532Q9HCE3 1301 aa20.71■□□□□ 0.91
SNX17-210ENST00000537606 ZPR1O75312 459 aa20.7■□□□□ 0.91
SNX17-210ENST00000537606 TTF1Q15361 905 aaPredicted RBP20.7■□□□□ 0.91
SNX17-210ENST00000537606 RTCBQ9Y3I0 505 aaKnown RBP20.7■□□□□ 0.91
SNX17-210ENST00000537606 LRP5O75197 1615 aa20.7■□□□□ 0.91
SNX17-210ENST00000537606 TAF1P21675 1872 aa20.7■□□□□ 0.9
SNX17-210ENST00000537606 F13A1P00488 732 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms