RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 ZIC5Q96T25 663 aa11.43□□□□□ -0.58
SMAD3-203ENST00000537194 ANKRD2Q9GZV1 360 aa11.43□□□□□ -0.58
SMAD3-203ENST00000537194 COA1Q9GZY4 146 aa11.43□□□□□ -0.58
SMAD3-203ENST00000537194 LEMD3Q9Y2U8 911 aa11.43□□□□□ -0.58
SMAD3-203ENST00000537194 ZNF609O15014 1411 aa11.43□□□□□ -0.58
SMAD3-203ENST00000537194 MED23Q9ULK4 1368 aa11.42□□□□□ -0.58
SMAD3-203ENST00000537194 PAPPA2Q9BXP8 1791 aa11.42□□□□□ -0.58
SMAD3-203ENST00000537194 CCT4P50991 539 aaKnown RBP11.42□□□□□ -0.58
SMAD3-203ENST00000537194 STRIP1Q5VSL9 837 aa11.42□□□□□ -0.58
SMAD3-203ENST00000537194 ARMC9Q7Z3E5 817 aa11.42□□□□□ -0.58
SMAD3-203ENST00000537194 CTU1Q7Z7A3 348 aaKnown RBP11.42□□□□□ -0.58
SMAD3-203ENST00000537194 TTLL11Q8NHH1 800 aa11.42□□□□□ -0.58
SMAD3-203ENST00000537194 CSRNP1Q96S65 589 aa11.42□□□□□ -0.58
SMAD3-203ENST00000537194 MINPP1Q9UNW1 487 aa11.42□□□□□ -0.58
SMAD3-203ENST00000537194 SPEF2Q9C093 1822 aa11.42□□□□□ -0.58
SMAD3-203ENST00000537194 PKN2Q16513 984 aaKnown RBP11.41□□□□□ -0.58
SMAD3-203ENST00000537194 TWISTNBQ3B726 338 aaPredicted RBP11.41□□□□□ -0.58
SMAD3-203ENST00000537194 TTLL5Q6EMB2 1281 aa11.41□□□□□ -0.58
SMAD3-203ENST00000537194 UBE3BQ7Z3V4 1068 aa11.41□□□□□ -0.58
SMAD3-203ENST00000537194 RASAL3Q86YV0 1011 aa11.41□□□□□ -0.58
SMAD3-203ENST00000537194 APOBEC3FQ8IUX4 373 aaKnown RBP11.41□□□□□ -0.58
SMAD3-203ENST00000537194 GMLQ99445 158 aa11.41□□□□□ -0.58
SMAD3-203ENST00000537194 GREM2Q9H772 168 aa11.41□□□□□ -0.58
SMAD3-203ENST00000537194 ASTN2O75129 1339 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-203ENST00000537194 NEURL1BA8MQ27 555 aa11.4□□□□□ -0.58
SMAD3-203ENST00000537194 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
SMAD3-203ENST00000537194 SREBF2Q12772 1141 aa11.4□□□□□ -0.58
SMAD3-203ENST00000537194 FKBP5Q13451 457 aaPredicted RBP11.4□□□□□ -0.58
SMAD3-203ENST00000537194 ZNF804BA4D1E1 1349 aa11.39□□□□□ -0.59
SMAD3-203ENST00000537194 ANKRD18BA2A2Z9 1011 aa11.39□□□□□ -0.59
SMAD3-203ENST00000537194 UBE2Q2LH0YL09 131 aa11.39□□□□□ -0.59
SMAD3-203ENST00000537194 MYO1BO43795 1136 aa11.39□□□□□ -0.59
SMAD3-203ENST00000537194 IGKV5-2P06315 115 aa11.39□□□□□ -0.59
SMAD3-203ENST00000537194 ITGA6P23229 1130 aa11.39□□□□□ -0.59
SMAD3-203ENST00000537194 CWF19L2Q2TBE0 894 aaKnown RBP11.39□□□□□ -0.59
SMAD3-203ENST00000537194 TSPYL6Q8N831 410 aa11.39□□□□□ -0.59
SMAD3-203ENST00000537194 TSR2Q969E8 191 aaKnown RBP11.39□□□□□ -0.59
SMAD3-203ENST00000537194 H7C1W4 665 aa11.38□□□□□ -0.59
SMAD3-203ENST00000537194 CCDC27Q2M243 656 aa11.38□□□□□ -0.59
SMAD3-203ENST00000537194 NBPF9Q3BBW0 867 aa11.38□□□□□ -0.59
SMAD3-203ENST00000537194 TAF7LQ5H9L4 462 aa11.38□□□□□ -0.59
SMAD3-203ENST00000537194 DACT2Q5SW24 774 aa11.38□□□□□ -0.59
SMAD3-203ENST00000537194 DNAAF4Q8WXU2 420 aa11.38□□□□□ -0.59
SMAD3-203ENST00000537194 CHMP3Q9Y3E7 222 aa11.38□□□□□ -0.59
SMAD3-203ENST00000537194 COL4A1P02462 1669 aa11.38□□□□□ -0.59
SMAD3-203ENST00000537194 IL16Q14005 1332 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 WNT10BO00744 389 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 SLC34A2O95436 690 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 ALDH1A1P00352 501 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 GTF2IP78347 998 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 FLIIQ13045 1269 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 IFIT5Q13325 482 aaKnown RBP11.37□□□□□ -0.59
SMAD3-203ENST00000537194 GCKRQ14397 625 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 DLGAP5Q15398 846 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 ZNF804AQ7Z570 1209 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 KIAA0825Q8IV33 1275 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 LINS1Q8NG48 757 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 PLA2G12BQ9BX93 195 aa11.37□□□□□ -0.59
SMAD3-203ENST00000537194 PPP1R12BO60237 982 aaPredicted RBP11.36□□□□□ -0.59
SMAD3-203ENST00000537194 SASH1O94885 1247 aa11.36□□□□□ -0.59
SMAD3-203ENST00000537194 SOX10P56693 466 aa11.36□□□□□ -0.59
SMAD3-203ENST00000537194 PRAMEF18Q5VWM3 479 aa11.36□□□□□ -0.59
SMAD3-203ENST00000537194 MOB2Q70IA6 237 aa11.36□□□□□ -0.59
SMAD3-203ENST00000537194 SLC10A4Q96EP9 437 aa11.36□□□□□ -0.59
SMAD3-203ENST00000537194 TBC1D8O95759 1140 aa11.35□□□□□ -0.59
SMAD3-203ENST00000537194 TM4SF4P48230 202 aa11.35□□□□□ -0.59
SMAD3-203ENST00000537194 INHBEP58166 350 aa11.35□□□□□ -0.59
SMAD3-203ENST00000537194 CHRNDQ07001 517 aa11.35□□□□□ -0.59
SMAD3-203ENST00000537194 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
SMAD3-203ENST00000537194 PRKG1Q13976 671 aa11.35□□□□□ -0.59
SMAD3-203ENST00000537194 SUPT20HL1Q3ZLR7 823 aa11.35□□□□□ -0.59
SMAD3-203ENST00000537194 NCBP3Q53F19 620 aaKnown RBP11.35□□□□□ -0.59
SMAD3-203ENST00000537194 OTUD7BQ6GQQ9 843 aa11.35□□□□□ -0.59
SMAD3-203ENST00000537194 MXD3Q9BW11 206 aa11.35□□□□□ -0.59
SMAD3-203ENST00000537194 ANGEL1Q9UNK9 670 aaKnown RBP11.35□□□□□ -0.59
SMAD3-203ENST00000537194 SCAF8Q9UPN6 1271 aaKnown RBP11.35□□□□□ -0.59
SMAD3-203ENST00000537194 PPP2R3BQ9Y5P8 575 aa11.35□□□□□ -0.59
SMAD3-203ENST00000537194 COL1A1P02452 1464 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-203ENST00000537194 MANSC4A6NHS7 340 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-203ENST00000537194 GPR25O00155 361 aa11.34□□□□□ -0.59
SMAD3-203ENST00000537194 FKTNO75072 461 aa11.34□□□□□ -0.59
SMAD3-203ENST00000537194 CSF1RP07333 972 aa11.34□□□□□ -0.59
SMAD3-203ENST00000537194 RBM5P52756 815 aaKnown RBP eCLIP11.34□□□□□ -0.59
SMAD3-203ENST00000537194 CCDC57Q2TAC2 916 aa11.34□□□□□ -0.59
SMAD3-203ENST00000537194 NOM1Q5C9Z4 860 aaKnown RBP11.34□□□□□ -0.59
SMAD3-203ENST00000537194 G2E3Q7L622 706 aa11.34□□□□□ -0.59
SMAD3-203ENST00000537194 ZNF296Q8WUU4 475 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-203ENST00000537194 CD209Q9NNX6 404 aa11.34□□□□□ -0.59
SMAD3-203ENST00000537194 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-203ENST00000537194 UNCXA6NJT0 531 aa11.33□□□□□ -0.6
SMAD3-203ENST00000537194 IREB2P48200 963 aaKnown RBP11.33□□□□□ -0.6
SMAD3-203ENST00000537194 PTPN12Q05209 780 aaKnown RBP11.33□□□□□ -0.6
SMAD3-203ENST00000537194 FBXO46Q6PJ61 603 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-203ENST00000537194 TXNRD3Q86VQ6 643 aa11.33□□□□□ -0.6
SMAD3-203ENST00000537194 WDR63Q8IWG1 891 aa11.33□□□□□ -0.6
SMAD3-203ENST00000537194 DEFB129Q9H1M3 183 aa11.33□□□□□ -0.6
SMAD3-203ENST00000537194 MRS2Q9HD23 443 aa11.33□□□□□ -0.6
SMAD3-203ENST00000537194 CNNM1Q9NRU3 951 aa11.33□□□□□ -0.6
SMAD3-203ENST00000537194 C9orf78Q9NZ63 289 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms