RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 SH2B1Q9NRF2 756 aaPredicted RBP9.7□□□□□ -0.86
VBP1-203ENST00000535916 TM4SF5O14894 197 aa9.69□□□□□ -0.86
VBP1-203ENST00000535916 PDGFAP04085 211 aa9.69□□□□□ -0.86
VBP1-203ENST00000535916 ACPPP15309 386 aa9.69□□□□□ -0.86
VBP1-203ENST00000535916 MPSTP25325 297 aa9.69□□□□□ -0.86
VBP1-203ENST00000535916 NOM1Q5C9Z4 860 aaKnown RBP9.69□□□□□ -0.86
VBP1-203ENST00000535916 C1orf127Q8N9H9 656 aa9.69□□□□□ -0.86
VBP1-203ENST00000535916 POP1Q99575 1024 aaKnown RBP9.69□□□□□ -0.86
VBP1-203ENST00000535916 GGNBP2Q9H3C7 697 aa9.69□□□□□ -0.86
VBP1-203ENST00000535916 TMEM88BA6NKF7 163 aa9.68□□□□□ -0.86
VBP1-203ENST00000535916 FSCN2O14926 492 aa9.68□□□□□ -0.86
VBP1-203ENST00000535916 PTPRAP18433 802 aa9.68□□□□□ -0.86
VBP1-203ENST00000535916 FSTP19883 344 aa9.68□□□□□ -0.86
VBP1-203ENST00000535916 ACAD11Q709F0 780 aa9.68□□□□□ -0.86
VBP1-203ENST00000535916 NBPF11Q86T75 865 aa9.68□□□□□ -0.86
VBP1-203ENST00000535916 GTF3C2Q8WUA4 911 aaPredicted RBP9.68□□□□□ -0.86
VBP1-203ENST00000535916 UBL7Q96S82 380 aaPredicted RBP9.68□□□□□ -0.86
VBP1-203ENST00000535916 SALL4Q9UJQ4 1053 aa9.68□□□□□ -0.86
VBP1-203ENST00000535916 RPLP1P05386 114 aaKnown RBP9.67□□□□□ -0.86
VBP1-203ENST00000535916 EIF1AXP47813 144 aaKnown RBP9.67□□□□□ -0.86
VBP1-203ENST00000535916 MTMR3Q13615 1198 aa9.67□□□□□ -0.86
VBP1-203ENST00000535916 C8orf34Q49A92 452 aa9.67□□□□□ -0.86
VBP1-203ENST00000535916 XKR5Q6UX68 686 aa9.67□□□□□ -0.86
VBP1-203ENST00000535916 KRTAP4-7Q9BYR0 210 aa9.67□□□□□ -0.86
VBP1-203ENST00000535916 RNF112Q9ULX5 631 aa9.67□□□□□ -0.86
VBP1-203ENST00000535916 GTF3C3Q9Y5Q9 886 aa9.67□□□□□ -0.86
VBP1-203ENST00000535916 PCSK2P16519 638 aa9.66□□□□□ -0.86
VBP1-203ENST00000535916 CES1P23141 567 aa9.66□□□□□ -0.86
VBP1-203ENST00000535916 SSFA2P28290 1259 aa9.66□□□□□ -0.86
VBP1-203ENST00000535916 MZF1P28698 734 aaPredicted RBP9.66□□□□□ -0.86
VBP1-203ENST00000535916 FAM117BQ6P1L5 589 aa9.66□□□□□ -0.86
VBP1-203ENST00000535916 ADAM19Q9H013 955 aa9.66□□□□□ -0.86
VBP1-203ENST00000535916 DDX3YO15523 660 aaKnown RBP9.65□□□□□ -0.86
VBP1-203ENST00000535916 ADAM11O75078 769 aa9.65□□□□□ -0.86
VBP1-203ENST00000535916 TRPA1O75762 1119 aa9.65□□□□□ -0.86
VBP1-203ENST00000535916 KIAA1211Q6ZU35 1233 aa9.65□□□□□ -0.86
VBP1-203ENST00000535916 KLHL23Q8NBE8 558 aa9.65□□□□□ -0.86
VBP1-203ENST00000535916 UBASH3BQ8TF42 649 aa9.65□□□□□ -0.86
VBP1-203ENST00000535916 FOXD4L4Q8WXT5 416 aaPredicted RBP9.65□□□□□ -0.86
VBP1-203ENST00000535916 KLHDC7BQ96G42 594 aa9.65□□□□□ -0.86
VBP1-203ENST00000535916 NFKBIEO00221 500 aa9.64□□□□□ -0.87
VBP1-203ENST00000535916 HHIPQ96QV1 700 aa9.64□□□□□ -0.87
VBP1-203ENST00000535916 CHRDQ9H2X0 955 aa9.64□□□□□ -0.87
VBP1-203ENST00000535916 SEC31BQ9NQW1 1179 aa9.64□□□□□ -0.87
VBP1-203ENST00000535916 DZANK1Q9NVP4 752 aa9.64□□□□□ -0.87
VBP1-203ENST00000535916 RAXQ9Y2V3 346 aa9.64□□□□□ -0.87
VBP1-203ENST00000535916 FAM177BA6PVY3 158 aa9.63□□□□□ -0.87
VBP1-203ENST00000535916 H3BRJ5 948 aa9.63□□□□□ -0.87
VBP1-203ENST00000535916 DUOXA2Q1HG44 320 aa9.63□□□□□ -0.87
VBP1-203ENST00000535916 ARMC10Q8N2F6 343 aa9.63□□□□□ -0.87
VBP1-203ENST00000535916 TTC16Q8NEE8 873 aa9.63□□□□□ -0.87
VBP1-203ENST00000535916 C1orf115Q9H7X2 142 aa9.63□□□□□ -0.87
VBP1-203ENST00000535916 POLIQ9UNA4 740 aa9.63□□□□□ -0.87
VBP1-203ENST00000535916 CEP41Q9BYV8 373 aa9.62□□□□□ -0.87
VBP1-203ENST00000535916 CARNS1A5YM72 827 aa9.61□□□□□ -0.87
VBP1-203ENST00000535916 PDE2AO00408 941 aaPredicted RBP9.61□□□□□ -0.87
VBP1-203ENST00000535916 PPP1R15AO75807 674 aaPredicted RBP9.61□□□□□ -0.87
VBP1-203ENST00000535916 CABP4P57796 275 aa9.61□□□□□ -0.87
VBP1-203ENST00000535916 PIP4K2BP78356 416 aa9.61□□□□□ -0.87
VBP1-203ENST00000535916 ALKBH2Q6NS38 261 aa9.61□□□□□ -0.87
VBP1-203ENST00000535916 DHX15O43143 795 aaKnown RBP9.6□□□□□ -0.87
VBP1-203ENST00000535916 SLC51AQ86UW1 340 aa9.6□□□□□ -0.87
VBP1-203ENST00000535916 STOML1Q9UBI4 398 aa9.6□□□□□ -0.87
VBP1-203ENST00000535916 NPR3P17342 541 aa9.59□□□□□ -0.87
VBP1-203ENST00000535916 AAMPQ13685 434 aa9.59□□□□□ -0.87
VBP1-203ENST00000535916 PHLDB3Q6NSJ2 640 aa9.59□□□□□ -0.87
VBP1-203ENST00000535916 WNT8BQ93098 351 aa9.59□□□□□ -0.87
VBP1-203ENST00000535916 PMEPA1Q969W9 287 aa9.59□□□□□ -0.87
VBP1-203ENST00000535916 UTP4Q969X6 686 aaKnown RBP9.59□□□□□ -0.87
VBP1-203ENST00000535916 FAM46AQ96IP4 442 aaKnown RBP9.59□□□□□ -0.87
VBP1-203ENST00000535916 SOX13Q9UN79 622 aa9.59□□□□□ -0.87
VBP1-203ENST00000535916 EREGO14944 169 aa9.58□□□□□ -0.88
VBP1-203ENST00000535916 TNFRSF21O75509 655 aa9.58□□□□□ -0.88
VBP1-203ENST00000535916 IGLV1-40P01703 118 aa9.58□□□□□ -0.88
VBP1-203ENST00000535916 NLRP12P59046 1061 aa9.58□□□□□ -0.88
VBP1-203ENST00000535916 UVSSAQ2YD98 709 aa9.58□□□□□ -0.88
VBP1-203ENST00000535916 HGSNATQ68CP4 663 aa9.58□□□□□ -0.88
VBP1-203ENST00000535916 TMEM102Q8N9M5 508 aaPredicted RBP9.58□□□□□ -0.88
VBP1-203ENST00000535916 SLC7A3Q8WY07 619 aa9.58□□□□□ -0.88
VBP1-203ENST00000535916 PHACTR2O75167 634 aa9.57□□□□□ -0.88
VBP1-203ENST00000535916 SSTR4P31391 388 aa9.57□□□□□ -0.88
VBP1-203ENST00000535916 LCE1DQ5T752 114 aa9.57□□□□□ -0.88
VBP1-203ENST00000535916 OSMRQ99650 979 aa9.57□□□□□ -0.88
VBP1-203ENST00000535916 ZKSCAN3Q9BRR0 538 aa9.57□□□□□ -0.88
VBP1-203ENST00000535916 OSGEPQ9NPF4 335 aa9.57□□□□□ -0.88
VBP1-203ENST00000535916 FOXD3Q9UJU5 478 aaPredicted RBP9.57□□□□□ -0.88
VBP1-203ENST00000535916 GSC2O15499 205 aa9.56□□□□□ -0.88
VBP1-203ENST00000535916 FZD6O60353 706 aa9.56□□□□□ -0.88
VBP1-203ENST00000535916 COBLO75128 1261 aa9.56□□□□□ -0.88
VBP1-203ENST00000535916 SNX29Q8TEQ0 813 aa9.56□□□□□ -0.88
VBP1-203ENST00000535916 NXPE3Q969Y0 559 aa9.56□□□□□ -0.88
VBP1-203ENST00000535916 MYRFLQ96LU7 910 aa9.56□□□□□ -0.88
VBP1-203ENST00000535916 C7orf69Q9H7B7 122 aa9.56□□□□□ -0.88
VBP1-203ENST00000535916 PCMTD2Q9NV79 361 aa9.56□□□□□ -0.88
VBP1-203ENST00000535916 FAM13AO94988 1023 aa9.55□□□□□ -0.88
VBP1-203ENST00000535916 TRIM42Q8IWZ5 723 aa9.55□□□□□ -0.88
VBP1-203ENST00000535916 ANO2Q9NQ90 1003 aa9.55□□□□□ -0.88
VBP1-203ENST00000535916 HMX2A2RU54 273 aa9.54□□□□□ -0.88
VBP1-203ENST00000535916 ABL1P00519 1130 aa9.54□□□□□ -0.88
VBP1-203ENST00000535916 TGFB1P01137 390 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms