RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 RTFDC1Q9BY42 306 aaPredicted RBP15.03■□□□□ -0
SCARB1-204ENST00000535005 CCDC8Q9H0W5 538 aaPredicted RBP15.03■□□□□ -0
SCARB1-204ENST00000535005 STAP2Q9UGK3 403 aa15.03■□□□□ -0
SCARB1-204ENST00000535005 DBNLQ9UJU6 430 aaKnown RBP15.03■□□□□ -0
SCARB1-204ENST00000535005 GGA1Q9UJY5 639 aa15.03■□□□□ -0
SCARB1-204ENST00000535005 IRS2Q9Y4H2 1338 aa15.03■□□□□ -0
SCARB1-204ENST00000535005 SNAP23O00161 211 aa15.02■□□□□ -0
SCARB1-204ENST00000535005 KCNJ4P48050 445 aa15.02■□□□□ -0
SCARB1-204ENST00000535005 DPP8Q6V1X1 898 aaPredicted RBP15.02■□□□□ -0
SCARB1-204ENST00000535005 NEUROD6Q96NK8 337 aa15.02■□□□□ -0
SCARB1-204ENST00000535005 DBNDD2Q9BQY9 259 aa15.02■□□□□ -0
SCARB1-204ENST00000535005 CACNA1SQ13698 1873 aa15.02□□□□□ -0.01
SCARB1-204ENST00000535005 ZBTB22O15209 634 aa15.01□□□□□ -0.01
SCARB1-204ENST00000535005 PLEKHM2Q8IWE5 1019 aa15.01□□□□□ -0.01
SCARB1-204ENST00000535005 OTUD7AQ8TE49 926 aaPredicted RBP15.01□□□□□ -0.01
SCARB1-204ENST00000535005 XAGE2Q96GT9 111 aa15.01□□□□□ -0.01
SCARB1-204ENST00000535005 OSBPL3Q9H4L5 887 aa15.01□□□□□ -0.01
SCARB1-204ENST00000535005 POLLQ9UGP5 575 aa15.01□□□□□ -0.01
SCARB1-204ENST00000535005 WTIPA6NIX2 430 aaPredicted RBP15.01□□□□□ -0.01
SCARB1-204ENST00000535005 UFL1O94874 794 aa15.01□□□□□ -0.01
SCARB1-204ENST00000535005 PSMD1Q99460 953 aa15.01□□□□□ -0.01
SCARB1-204ENST00000535005 TLR7Q9NYK1 1049 aaKnown RBP15.01□□□□□ -0.01
SCARB1-204ENST00000535005 ZNF219Q9P2Y4 722 aaPredicted RBP15.01□□□□□ -0.01
SCARB1-204ENST00000535005 BCS1LQ9Y276 419 aa15.01□□□□□ -0.01
SCARB1-204ENST00000535005 TTC41PQ6P2S7 1318 aa15.01□□□□□ -0.01
SCARB1-204ENST00000535005 DUOX1Q9NRD9 1551 aa15□□□□□ -0.01
SCARB1-204ENST00000535005 MX1P20591 662 aa15□□□□□ -0.01
SCARB1-204ENST00000535005 ADORA1P30542 326 aa15□□□□□ -0.01
SCARB1-204ENST00000535005 PDE1AP54750 535 aa15□□□□□ -0.01
SCARB1-204ENST00000535005 FAM43AQ8N2R8 423 aa15□□□□□ -0.01
SCARB1-204ENST00000535005 SUPT20HQ8NEM7 779 aa15□□□□□ -0.01
SCARB1-204ENST00000535005 ZNF512BQ96KM6 892 aaPredicted RBP15□□□□□ -0.01
SCARB1-204ENST00000535005 ECHDC1Q9NTX5 307 aa15□□□□□ -0.01
SCARB1-204ENST00000535005 AOX1Q06278 1338 aa15□□□□□ -0.01
SCARB1-204ENST00000535005 MED23Q9ULK4 1368 aa15□□□□□ -0.01
SCARB1-204ENST00000535005 ARAP2Q8WZ64 1704 aa15□□□□□ -0.01
SCARB1-204ENST00000535005 C6orf229H3BNL8 230 aa14.99□□□□□ -0.01
SCARB1-204ENST00000535005 FBXO33Q7Z6M2 555 aa14.99□□□□□ -0.01
SCARB1-204ENST00000535005 UBE2Q2Q8WVN8 375 aa14.99□□□□□ -0.01
SCARB1-204ENST00000535005 GPATCH3Q96I76 525 aa14.99□□□□□ -0.01
SCARB1-204ENST00000535005 EYA3Q99504 573 aa14.99□□□□□ -0.01
SCARB1-204ENST00000535005 CCDC158Q5M9N0 1113 aa14.99□□□□□ -0.01
SCARB1-204ENST00000535005 FAM84BQ96KN1 310 aaPredicted RBP14.99□□□□□ -0.01
SCARB1-204ENST00000535005 VPS33BQ9H267 617 aa14.99□□□□□ -0.01
SCARB1-204ENST00000535005 ARFGEF1Q9Y6D6 1849 aa14.98□□□□□ -0.01
SCARB1-204ENST00000535005 ATP5JP18859 108 aa14.98□□□□□ -0.01
SCARB1-204ENST00000535005 KLRK1P26718 216 aa14.98□□□□□ -0.01
SCARB1-204ENST00000535005 FKBP4Q02790 459 aaKnown RBP eCLIP14.98□□□□□ -0.01
SCARB1-204ENST00000535005 CAVIN4Q5BKX8 364 aa14.98□□□□□ -0.01
SCARB1-204ENST00000535005 GORABQ5T7V8 394 aa14.98□□□□□ -0.01
SCARB1-204ENST00000535005 CCDC102BQ68D86 513 aa14.98□□□□□ -0.01
SCARB1-204ENST00000535005 SKAP1Q86WV1 359 aa14.98□□□□□ -0.01
SCARB1-204ENST00000535005 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.98□□□□□ -0.01
SCARB1-204ENST00000535005 TXNRD3Q86VQ6 643 aa14.97□□□□□ -0.01
SCARB1-204ENST00000535005 LTBP3Q9NS15 1303 aa14.97□□□□□ -0.01
SCARB1-204ENST00000535005 ERC2O15083 957 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 GLRX3O76003 335 aaKnown RBP14.96□□□□□ -0.01
SCARB1-204ENST00000535005 UQCRFS1P1P0C7P4 283 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 HIBADHP31937 336 aaKnown RBP14.96□□□□□ -0.01
SCARB1-204ENST00000535005 GYG1P46976 350 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 BCAMP50895 628 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 C8orf34Q49A92 452 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 PI4K2BQ8TCG2 481 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 ZC3H12CQ9C0D7 883 aaKnown RBP14.96□□□□□ -0.01
SCARB1-204ENST00000535005 WWC3Q9ULE0 1092 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 SRCAPQ6ZRS2 3230 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 ARID4AP29374 1257 aaPredicted RBP14.96□□□□□ -0.01
SCARB1-204ENST00000535005 PHKA1P46020 1223 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 RGS3P49796 1198 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 KIAA2012Q0VF49 1180 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 WASHC4Q2M389 1173 aa14.96□□□□□ -0.01
SCARB1-204ENST00000535005 GPR101Q96P66 508 aaPredicted RBP14.96□□□□□ -0.01
SCARB1-204ENST00000535005 NFKBIEO00221 500 aa14.95□□□□□ -0.02
SCARB1-204ENST00000535005 SEMA3EO15041 775 aa14.95□□□□□ -0.02
SCARB1-204ENST00000535005 TTC39AQ5SRH9 613 aa14.95□□□□□ -0.02
SCARB1-204ENST00000535005 ZNF804AQ7Z570 1209 aa14.95□□□□□ -0.02
SCARB1-204ENST00000535005 GNL3LQ9NVN8 582 aaKnown RBP14.95□□□□□ -0.02
SCARB1-204ENST00000535005 BRPF3Q9ULD4 1205 aa14.95□□□□□ -0.02
SCARB1-204ENST00000535005 FER1L6Q2WGJ9 1857 aa14.95□□□□□ -0.02
SCARB1-204ENST00000535005 TDRD7Q8NHU6 1098 aaKnown RBP14.94□□□□□ -0.02
SCARB1-204ENST00000535005 COA1Q9GZY4 146 aa14.94□□□□□ -0.02
SCARB1-204ENST00000535005 TAOK3Q9H2K8 898 aa14.94□□□□□ -0.02
SCARB1-204ENST00000535005 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
SCARB1-204ENST00000535005 IL1R1P14778 569 aa14.94□□□□□ -0.02
SCARB1-204ENST00000535005 TSHZ3Q63HK5 1081 aa14.94□□□□□ -0.02
SCARB1-204ENST00000535005 VPS37DQ86XT2 251 aa14.94□□□□□ -0.02
SCARB1-204ENST00000535005 CD209Q9NNX6 404 aa14.94□□□□□ -0.02
SCARB1-204ENST00000535005 PDS5AQ29RF7 1337 aaKnown RBP14.93□□□□□ -0.02
SCARB1-204ENST00000535005 RIMBP2O15034 1052 aa14.93□□□□□ -0.02
SCARB1-204ENST00000535005 TTC22Q5TAA0 569 aa14.93□□□□□ -0.02
SCARB1-204ENST00000535005 HAUS7Q99871 368 aa14.93□□□□□ -0.02
SCARB1-204ENST00000535005 YBX3P16989 372 aaKnown RBP eCLIP14.92□□□□□ -0.021e-6■□□□□ 8
SCARB1-204ENST00000535005 SCARF1Q14162 830 aa14.92□□□□□ -0.02
SCARB1-204ENST00000535005 HMG20BQ9P0W2 317 aa14.92□□□□□ -0.02
SCARB1-204ENST00000535005 PPIP5K2O43314 1243 aa14.92□□□□□ -0.02
SCARB1-204ENST00000535005 IARSP41252 1262 aaKnown RBP14.92□□□□□ -0.02
SCARB1-204ENST00000535005 MCAMP43121 646 aa14.92□□□□□ -0.02
SCARB1-204ENST00000535005 RASGRF1Q13972 1273 aa14.92□□□□□ -0.02
SCARB1-204ENST00000535005 AOC3Q16853 763 aa14.92□□□□□ -0.02
SCARB1-204ENST00000535005 BMP2KLQ5H9B9 411 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms