RNA–Protein interactions for RNA: ENST00000534591.1

VPS51-216, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 5

Gene VPS51, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-216ENST00000534591 ADORA1P30542 326 aa20.63■□□□□ 0.89
VPS51-216ENST00000534591 CWC27Q6UX04 472 aaKnown RBP20.63■□□□□ 0.89
VPS51-216ENST00000534591 KIAA1211Q6ZU35 1233 aa20.63■□□□□ 0.89
VPS51-216ENST00000534591 CNBD1Q8NA66 436 aa20.63■□□□□ 0.89
VPS51-216ENST00000534591 DNAJC2Q99543 621 aaKnown RBP20.63■□□□□ 0.89
VPS51-216ENST00000534591 BSDC1Q9NW68 430 aaPredicted RBP20.63■□□□□ 0.89
VPS51-216ENST00000534591 TNRC6CQ9HCJ0 1690 aaKnown RBP20.62■□□□□ 0.89
VPS51-216ENST00000534591 SLC5A1P13866 664 aa20.62■□□□□ 0.89
VPS51-216ENST00000534591 KBTBD3Q8NAB2 608 aa20.62■□□□□ 0.89
VPS51-216ENST00000534591 SNRKQ9NRH2 765 aa20.62■□□□□ 0.89
VPS51-216ENST00000534591 PAG1Q9NWQ8 432 aa20.62■□□□□ 0.89
VPS51-216ENST00000534591 RABEP1Q15276 862 aa20.61■□□□□ 0.89
VPS51-216ENST00000534591 SNX21Q969T3 373 aa20.61■□□□□ 0.89
VPS51-216ENST00000534591 ARAP2Q8WZ64 1704 aa20.6■□□□□ 0.89
VPS51-216ENST00000534591 GRIN3BO60391 1043 aa20.6■□□□□ 0.89
VPS51-216ENST00000534591 ANAPC15P60006 121 aa20.6■□□□□ 0.89
VPS51-216ENST00000534591 PRR5LQ6MZQ0 368 aa20.6■□□□□ 0.89
VPS51-216ENST00000534591 EDC3Q96F86 508 aaKnown RBP20.6■□□□□ 0.89
VPS51-216ENST00000534591 IL25Q9H293 177 aa20.6■□□□□ 0.89
VPS51-216ENST00000534591 UQCRFS1P1P0C7P4 283 aa20.59■□□□□ 0.89
VPS51-216ENST00000534591 CHRNDQ07001 517 aa20.59■□□□□ 0.89
VPS51-216ENST00000534591 NMIQ13287 307 aaPredicted RBP20.59■□□□□ 0.89
VPS51-216ENST00000534591 LRRFIP1Q32MZ4 808 aaKnown RBP20.59■□□□□ 0.89
VPS51-216ENST00000534591 ERICH6Q7L0X2 663 aa20.59■□□□□ 0.89
VPS51-216ENST00000534591 HELBQ8NG08 1087 aaPredicted RBP20.59■□□□□ 0.89
VPS51-216ENST00000534591 IL17RAQ96F46 866 aa20.59■□□□□ 0.89
VPS51-216ENST00000534591 TBC1D2Q9BYX2 928 aa20.59■□□□□ 0.89
VPS51-216ENST00000534591 BCS1LQ9Y276 419 aa20.59■□□□□ 0.89
VPS51-216ENST00000534591 SBF1O95248 1867 aa20.59■□□□□ 0.89
VPS51-216ENST00000534591 GOLIM4O00461 696 aa20.58■□□□□ 0.89
VPS51-216ENST00000534591 RPS8P62241 208 aaKnown RBP20.58■□□□□ 0.89
VPS51-216ENST00000534591 ST5P78524 1137 aa20.58■□□□□ 0.89
VPS51-216ENST00000534591 DDX46Q7L014 1031 aaKnown RBP20.58■□□□□ 0.89
VPS51-216ENST00000534591 IL27Q8NEV9 243 aa20.58■□□□□ 0.89
VPS51-216ENST00000534591 LSG1Q9H089 658 aaKnown RBP20.58■□□□□ 0.89
VPS51-216ENST00000534591 HSCBQ8IWL3 235 aa20.58■□□□□ 0.88
VPS51-216ENST00000534591 CCDC88AQ3V6T2 1871 aa20.57■□□□□ 0.88
VPS51-216ENST00000534591 ARID4AP29374 1257 aaPredicted RBP20.57■□□□□ 0.88
VPS51-216ENST00000534591 FAM227BQ96M60 508 aa20.57■□□□□ 0.88
VPS51-216ENST00000534591 SLX4Q8IY92 1834 aa20.56■□□□□ 0.88
VPS51-216ENST00000534591 HSPA4P34932 840 aa20.56■□□□□ 0.88
VPS51-216ENST00000534591 SLC4A3P48751 1232 aa20.56■□□□□ 0.88
VPS51-216ENST00000534591 UBE4AQ14139 1066 aa20.56■□□□□ 0.88
VPS51-216ENST00000534591 CCDC102BQ68D86 513 aa20.56■□□□□ 0.88
VPS51-216ENST00000534591 CELF1Q92879 486 aaKnown RBP20.56■□□□□ 0.88
VPS51-216ENST00000534591 NDUFB9Q9Y6M9 179 aa20.56■□□□□ 0.88
VPS51-216ENST00000534591 MED23Q9ULK4 1368 aa20.55■□□□□ 0.88
VPS51-216ENST00000534591 A0A0D9SFI3 127 aa20.55■□□□□ 0.88
VPS51-216ENST00000534591 TAF5LO75529 589 aa20.55■□□□□ 0.88
VPS51-216ENST00000534591 FKBP4Q02790 459 aaKnown RBP eCLIP20.55■□□□□ 0.88
VPS51-216ENST00000534591 MINPP1Q9UNW1 487 aa20.55■□□□□ 0.88
VPS51-216ENST00000534591 COL4A1P02462 1669 aa20.54■□□□□ 0.88
VPS51-216ENST00000534591 ZFYP08048 801 aaPredicted RBP20.54■□□□□ 0.88
VPS51-216ENST00000534591 TTF1Q15361 905 aaPredicted RBP20.54■□□□□ 0.88
VPS51-216ENST00000534591 ANKRD2Q9GZV1 360 aa20.54■□□□□ 0.88
VPS51-216ENST00000534591 PIM2Q9P1W9 311 aa20.54■□□□□ 0.88
VPS51-216ENST00000534591 CCDC171Q6TFL3 1326 aa20.54■□□□□ 0.88
VPS51-216ENST00000534591 PHKA1P46020 1223 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 SCARF1Q14162 830 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 HELLSQ9NRZ9 838 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 A0A1B0GUL6 1792 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 TAF1P21675 1872 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 AKAP11Q9UKA4 1901 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 RNF113AO15541 343 aaKnown RBP20.53■□□□□ 0.88
VPS51-216ENST00000534591 MCAMP43121 646 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 ZAP70P43403 619 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 GRAPQ13588 217 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 CRY2Q49AN0 593 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 MCMDC2Q4G0Z9 681 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 C2CD5Q86YS7 1000 aa20.53■□□□□ 0.88
VPS51-216ENST00000534591 ZNF784Q8NCA9 323 aaPredicted RBP20.53■□□□□ 0.88
VPS51-216ENST00000534591 GRAPLQ8TC17 118 aaPredicted RBP20.53■□□□□ 0.88
VPS51-216ENST00000534591 ZMYM1Q5SVZ6 1142 aa20.52■□□□□ 0.87
VPS51-216ENST00000534591 FER1L6Q2WGJ9 1857 aa20.51■□□□□ 0.87
VPS51-216ENST00000534591 PTH1RQ03431 593 aa20.51■□□□□ 0.87
VPS51-216ENST00000534591 DALRD3Q5D0E6 543 aaKnown RBP20.51■□□□□ 0.87
VPS51-216ENST00000534591 RPGRQ92834 1020 aaKnown RBP20.51■□□□□ 0.87
VPS51-216ENST00000534591 MAP4K1Q92918 833 aa20.51■□□□□ 0.87
VPS51-216ENST00000534591 BRIP1Q9BX63 1249 aa20.51■□□□□ 0.87
VPS51-216ENST00000534591 ANTXR1Q9H6X2 564 aa20.51■□□□□ 0.87
VPS51-216ENST00000534591 KLRG2A4D1S0 409 aaPredicted RBP20.5■□□□□ 0.87
VPS51-216ENST00000534591 ST18O60284 1047 aa20.5■□□□□ 0.87
VPS51-216ENST00000534591 ZSCAN25Q6NSZ9 544 aa20.5■□□□□ 0.87
VPS51-216ENST00000534591 KCNB2Q92953 911 aa20.5■□□□□ 0.87
VPS51-216ENST00000534591 RBM17Q96I25 401 aaKnown RBP20.5■□□□□ 0.87
VPS51-216ENST00000534591 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.5■□□□□ 0.875e-6■■■■■ 34.6
VPS51-216ENST00000534591 PALD1Q9ULE6 856 aa20.49■□□□□ 0.87
VPS51-216ENST00000534591 SNAP23O00161 211 aa20.48■□□□□ 0.87
VPS51-216ENST00000534591 HOXA10P31260 410 aaPredicted RBP20.48■□□□□ 0.87
VPS51-216ENST00000534591 ZNF589Q86UQ0 364 aaPredicted RBP20.48■□□□□ 0.87
VPS51-216ENST00000534591 SPATA5Q8NB90 893 aa20.48■□□□□ 0.87
VPS51-216ENST00000534591 GNL3LQ9NVN8 582 aaKnown RBP20.48■□□□□ 0.87
VPS51-216ENST00000534591 HMG20BQ9P0W2 317 aa20.48■□□□□ 0.87
VPS51-216ENST00000534591 H0YIN7 160 aa20.48■□□□□ 0.87
VPS51-216ENST00000534591 K7ELQ4 463 aaPredicted RBP20.48■□□□□ 0.87
VPS51-216ENST00000534591 CYP2E1P05181 493 aaPredicted RBP20.48■□□□□ 0.87
VPS51-216ENST00000534591 NECTIN1Q15223 517 aa20.48■□□□□ 0.87
VPS51-216ENST00000534591 CAVIN4Q5BKX8 364 aa20.48■□□□□ 0.87
VPS51-216ENST00000534591 PI16Q6UXB8 463 aa20.48■□□□□ 0.87
VPS51-216ENST00000534591 ARHGAP27Q6ZUM4 889 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms