RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 LACRTQ9GZZ8 138 aa7.37□□□□□ -1.23
ATPAF1-211ENST00000534216 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 TRPA1O75762 1119 aa7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 POLR3DP05423 398 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 ELNP15502 786 aa7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 MAPK1P28482 360 aa7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 ORC1Q13415 861 aa7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 GRIK4Q16099 956 aa7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 PEAR1Q5VY43 1037 aaPredicted RBP7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 ALKBH8Q96BT7 664 aaKnown RBP7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 HHIPQ96QV1 700 aa7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 OSMRQ99650 979 aa7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 ZKSCAN3Q9BRR0 538 aa7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 NIF3L1Q9GZT8 377 aa7.36□□□□□ -1.23
ATPAF1-211ENST00000534216 C1QTNF9BB2RNN3 333 aa7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 PDE2AO00408 941 aaPredicted RBP7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 CPNE3O75131 537 aaKnown RBP7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 DEAF1O75398 565 aaPredicted RBP7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 CDC27P30260 824 aa7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 CHRNA4P43681 627 aa7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 USPL1Q5W0Q7 1092 aa7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 GPAT2Q6NUI2 795 aa7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 CD163Q86VB7 1156 aa7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 FBXO11Q86XK2 927 aa7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 TMEM102Q8N9M5 508 aaPredicted RBP7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 MUC3BQ9H195 1237 aa7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 LATS2Q9NRM7 1088 aa7.35□□□□□ -1.23
ATPAF1-211ENST00000534216 APBA3O96018 575 aa7.34□□□□□ -1.23
ATPAF1-211ENST00000534216 PTPRAP18433 802 aa7.34□□□□□ -1.23
ATPAF1-211ENST00000534216 GALNT12Q8IXK2 581 aa7.34□□□□□ -1.23
ATPAF1-211ENST00000534216 NXPE3Q969Y0 559 aa7.34□□□□□ -1.23
ATPAF1-211ENST00000534216 ADAM19Q9H013 955 aa7.34□□□□□ -1.23
ATPAF1-211ENST00000534216 PPME1Q9Y570 386 aa7.34□□□□□ -1.23
ATPAF1-211ENST00000534216 EIF1AYO14602 144 aaKnown RBP7.33□□□□□ -1.24
ATPAF1-211ENST00000534216 SELPP16109 830 aa7.33□□□□□ -1.24
ATPAF1-211ENST00000534216 NACC1Q96RE7 527 aa7.33□□□□□ -1.24
ATPAF1-211ENST00000534216 KRTAP9-2Q9BYQ4 174 aa7.33□□□□□ -1.24
ATPAF1-211ENST00000534216 DNAJC25Q9H1X3 360 aa7.33□□□□□ -1.24
ATPAF1-211ENST00000534216 SRA1Q9HD15 236 aaKnown RBP7.33□□□□□ -1.24
ATPAF1-211ENST00000534216 SH2B1Q9NRF2 756 aaPredicted RBP7.33□□□□□ -1.24
ATPAF1-211ENST00000534216 A0A1W2PP55 124 aa7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 TREHO43280 583 aa7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 IGHA1P01876 353 aa7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 EPHA1P21709 976 aa7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 DSC3Q14574 896 aa7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 SETDB1Q15047 1291 aa7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 SHISA2Q6UWI4 295 aa7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 SND1Q7KZF4 910 aaKnown RBP eCLIP7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 MAP4K3Q8IVH8 894 aa7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 CSRNP1Q96S65 589 aa7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 SPOCK3Q9BQ16 436 aa7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 BHLHE41Q9C0J9 482 aaPredicted RBP7.32□□□□□ -1.24
ATPAF1-211ENST00000534216 FAM177BA6PVY3 158 aa7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 LINC01387J3KSC0 135 aa7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 DLL1O00548 723 aa7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 MSTNO14793 375 aa7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 PROCP04070 461 aa7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 CDC25BP30305 580 aa7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 TXNDC11Q6PKC3 985 aa7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 ZSCAN29Q8IWY8 852 aaPredicted RBP7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 LENG1Q96BZ8 264 aaPredicted RBP7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 ASB16Q96NS5 453 aa7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 SOX13Q9UN79 622 aa7.31□□□□□ -1.24
ATPAF1-211ENST00000534216 KRTAP9-6A0A140TA67 174 aa7.3□□□□□ -1.24
ATPAF1-211ENST00000534216 C9orf172C9J069 976 aa7.3□□□□□ -1.24
ATPAF1-211ENST00000534216 PLCB3Q01970 1234 aa7.3□□□□□ -1.24
ATPAF1-211ENST00000534216 KRTAP1-3Q8IUG1 177 aa7.3□□□□□ -1.24
ATPAF1-211ENST00000534216 BSNDQ8WZ55 320 aa7.3□□□□□ -1.24
ATPAF1-211ENST00000534216 CCDC74AQ96AQ1 378 aa7.3□□□□□ -1.24
ATPAF1-211ENST00000534216 NPHS2Q9NP85 383 aa7.3□□□□□ -1.24
ATPAF1-211ENST00000534216 NRG1Q02297 640 aaPredicted RBP7.29□□□□□ -1.24
ATPAF1-211ENST00000534216 KIAA0319Q5VV43 1072 aa7.29□□□□□ -1.24
ATPAF1-211ENST00000534216 FAM117BQ6P1L5 589 aa7.29□□□□□ -1.24
ATPAF1-211ENST00000534216 IGF2-ASQ6U949 168 aa7.29□□□□□ -1.24
ATPAF1-211ENST00000534216 CCNJLQ8IV13 435 aa7.29□□□□□ -1.24
ATPAF1-211ENST00000534216 GALNT11Q8NCW6 608 aa7.29□□□□□ -1.24
ATPAF1-211ENST00000534216 ASAP3Q8TDY4 903 aa7.29□□□□□ -1.24
ATPAF1-211ENST00000534216 TCF12Q99081 682 aa7.29□□□□□ -1.24
ATPAF1-211ENST00000534216 METTL12A8MUP2 240 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 H3BRJ5 948 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 TM4SF5O14894 197 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 FSCN2O14926 492 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 CABP4P57796 275 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 ADGRE1Q14246 886 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 MBTPS1Q14703 1052 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 VN1R5Q7Z5H4 357 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 DCAF11Q8TEB1 546 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 LIN7BQ9HAP6 207 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 USP21Q9UK80 565 aa7.28□□□□□ -1.24
ATPAF1-211ENST00000534216 GATA4P43694 442 aa7.27□□□□□ -1.25
ATPAF1-211ENST00000534216 PIP4K2BP78356 416 aa7.27□□□□□ -1.25
ATPAF1-211ENST00000534216 FMR1Q06787 632 aaKnown RBP eCLIP7.27□□□□□ -1.25
ATPAF1-211ENST00000534216 ENOX2Q16206 610 aaKnown RBP7.27□□□□□ -1.25
ATPAF1-211ENST00000534216 EPS8L3Q8TE67 593 aaKnown RBP7.27□□□□□ -1.25
ATPAF1-211ENST00000534216 WNT8BQ93098 351 aa7.27□□□□□ -1.25
ATPAF1-211ENST00000534216 PSMG3-AS1Q96PY0 264 aa7.27□□□□□ -1.25
ATPAF1-211ENST00000534216 CARD10Q9BWT7 1032 aa7.27□□□□□ -1.25
ATPAF1-211ENST00000534216 EHD4Q9H223 541 aa7.27□□□□□ -1.25
ATPAF1-211ENST00000534216 SEC31BQ9NQW1 1179 aa7.27□□□□□ -1.25
ATPAF1-211ENST00000534216 PNMA6FA0A0J9YX94 578 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms