RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 GJB4Q9NTQ9 266 aa18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 NIP7Q9Y221 180 aaKnown RBP eCLIP18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 AFDNP55196 1824 aaKnown RBP18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 CPLX1O14810 134 aa18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 CYP19A1P11511 503 aaPredicted RBP18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 LIG1P18858 919 aa18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 CTSWP56202 376 aa18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 ABCF2Q9UG63 623 aa18.8■□□□□ 0.6
ATP2C1-224ENST00000533801 FAM98CQ17RN3 349 aaKnown RBP18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 DHX32Q7L7V1 743 aaKnown RBP18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 A0A087WWV3 80 aa18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 DNTTIP2Q5QJE6 756 aaKnown RBP18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 PTPDC1A2A3K4 754 aa18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 GPAA1O43292 621 aa18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 POLR3DP05423 398 aaPredicted RBP18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 MCAMP43121 646 aa18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 IMMTQ16891 758 aaKnown RBP18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 ZMYM1Q5SVZ6 1142 aa18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 ERCC4Q92889 916 aaPredicted RBP18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 C8orf37Q96NL8 207 aa18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 DACT1Q9NYF0 836 aa18.79■□□□□ 0.6
ATP2C1-224ENST00000533801 JAG2Q9Y219 1238 aa18.78■□□□□ 0.6
ATP2C1-224ENST00000533801 CSPP1Q1MSJ5 1256 aa18.78■□□□□ 0.6
ATP2C1-224ENST00000533801 SLC4A8Q2Y0W8 1093 aa18.78■□□□□ 0.6
ATP2C1-224ENST00000533801 GTF3C6Q969F1 213 aa18.78■□□□□ 0.6
ATP2C1-224ENST00000533801 FGAP02671 866 aa18.78■□□□□ 0.6
ATP2C1-224ENST00000533801 MIGA1Q8NAN2 632 aa18.78■□□□□ 0.6
ATP2C1-224ENST00000533801 GOLGA8BA8MQT2 603 aa18.77■□□□□ 0.6
ATP2C1-224ENST00000533801 KLF18A0A0U1RQI7 1052 aa18.77■□□□□ 0.6
ATP2C1-224ENST00000533801 NFXL1Q6ZNB6 911 aa18.77■□□□□ 0.6
ATP2C1-224ENST00000533801 ARID3AQ99856 593 aa18.77■□□□□ 0.6
ATP2C1-224ENST00000533801 GOLGB1Q14789 3259 aaKnown RBP18.77■□□□□ 0.6
ATP2C1-224ENST00000533801 ZNF213O14771 459 aa18.77■□□□□ 0.59
ATP2C1-224ENST00000533801 MYL10Q9BUA6 226 aa18.77■□□□□ 0.59
ATP2C1-224ENST00000533801 HELLSQ9NRZ9 838 aa18.77■□□□□ 0.59
ATP2C1-224ENST00000533801 COL18A1P39060 1754 aa18.76■□□□□ 0.59
ATP2C1-224ENST00000533801 CRKLP46109 303 aaKnown RBP18.76■□□□□ 0.59
ATP2C1-224ENST00000533801 TRDNQ13061 729 aa18.76■□□□□ 0.59
ATP2C1-224ENST00000533801 SUSD4Q5VX71 490 aa18.76■□□□□ 0.59
ATP2C1-224ENST00000533801 AIDAQ96BJ3 306 aa18.76■□□□□ 0.59
ATP2C1-224ENST00000533801 TNMDQ9H2S6 317 aa18.76■□□□□ 0.59
ATP2C1-224ENST00000533801 PRC1O43663 620 aa18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 MICU3Q86XE3 530 aa18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 WWC3Q9ULE0 1092 aa18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 UBN2Q6ZU65 1347 aa18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 DRC7Q8IY82 874 aa18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.75■□□□□ 0.591e-6■■■■□ 20.6
ATP2C1-224ENST00000533801 NUP62CLQ9H1M0 184 aa18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 GNL2Q13823 731 aaKnown RBP18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 CCDC102BQ68D86 513 aa18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 ZSCAN30Q86W11 494 aa18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 NGLY1Q96IV0 654 aa18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 ZKSCAN3Q9BRR0 538 aa18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 PIH1D3Q9NQM4 214 aaKnown RBP18.75■□□□□ 0.59
ATP2C1-224ENST00000533801 WTIPA6NIX2 430 aaPredicted RBP18.74■□□□□ 0.59
ATP2C1-224ENST00000533801 ME1P48163 572 aa18.74■□□□□ 0.59
ATP2C1-224ENST00000533801 SF3A1Q15459 793 aaKnown RBP18.74■□□□□ 0.59
ATP2C1-224ENST00000533801 C17orf53Q8N3J3 647 aaPredicted RBP18.74■□□□□ 0.59
ATP2C1-224ENST00000533801 MAGEB6Q8N7X4 407 aa18.74■□□□□ 0.59
ATP2C1-224ENST00000533801 SIPA1L3O60292 1781 aaPredicted RBP18.74■□□□□ 0.59
ATP2C1-224ENST00000533801 ZNF532Q9HCE3 1301 aa18.74■□□□□ 0.59
ATP2C1-224ENST00000533801 LOC102724428A0A0B4J2F2 783 aa18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 BCAMP50895 628 aa18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 SIK1P57059 783 aa18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 LRRFIP1Q32MZ4 808 aaKnown RBP18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 PDE8AO60658 829 aa18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 VPS37DQ86XT2 251 aa18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 B4E1Z4 1266 aa18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 CLCN1P35523 988 aa18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 KCNB2Q92953 911 aa18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 BCL11BQ9C0K0 894 aaPredicted RBP18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 LRP2BPQ9P2M1 347 aa18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 SH3TC1Q8TE82 1336 aa18.73■□□□□ 0.59
ATP2C1-224ENST00000533801 CIAO1O76071 339 aa18.72■□□□□ 0.59
ATP2C1-224ENST00000533801 ADCY5O95622 1261 aa18.72■□□□□ 0.59
ATP2C1-224ENST00000533801 TTC12Q9H892 705 aaPredicted RBP18.72■□□□□ 0.59
ATP2C1-224ENST00000533801 LEO1Q8WVC0 666 aaPredicted RBP18.72■□□□□ 0.59
ATP2C1-224ENST00000533801 ARMT1Q9H993 441 aa18.72■□□□□ 0.59
ATP2C1-224ENST00000533801 CCDC87Q9NVE4 849 aa18.72■□□□□ 0.59
ATP2C1-224ENST00000533801 R3HCC1Q9Y3T6 440 aaKnown RBP18.72■□□□□ 0.59
ATP2C1-224ENST00000533801 ATP2B1P20020 1258 aa18.72■□□□□ 0.59
ATP2C1-224ENST00000533801 USPL1Q5W0Q7 1092 aa18.72■□□□□ 0.59
ATP2C1-224ENST00000533801 TUBGCP6Q96RT7 1819 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 PDE8BO95263 885 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 CTDSPL2Q05D32 466 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 MARCH10Q8NA82 808 aaPredicted RBP18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 APPBP2Q92624 585 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 DSCC1Q9BVC3 393 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 RIPOR2Q9Y4F9 1068 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 UTP14AQ9BVJ6 771 aaKnown RBP18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 CTNNA3Q9UI47 895 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 MINDY4BA8MYZ0 360 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 NR1I2O75469 434 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 ITPK1Q13572 414 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 LUZP1Q86V48 1076 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 NSUN7Q8NE18 718 aaKnown RBP18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 ARFGEF2Q9Y6D5 1785 aa18.71■□□□□ 0.59
ATP2C1-224ENST00000533801 IGHMBP2P38935 993 aaKnown RBP18.7■□□□□ 0.58
ATP2C1-224ENST00000533801 MAP3K11Q16584 847 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms