RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 G3V3G9 751 aa14.89□□□□□ -0.03
SSBP3-214ENST00000533209 FGFR2P21802 821 aa14.89□□□□□ -0.03
SSBP3-214ENST00000533209 DCAF8Q5TAQ9 597 aa14.89□□□□□ -0.03
SSBP3-214ENST00000533209 CIAPIN1Q6FI81 312 aa14.89□□□□□ -0.03
SSBP3-214ENST00000533209 SIRT2Q8IXJ6 389 aa14.89□□□□□ -0.03
SSBP3-214ENST00000533209 COA1Q9GZY4 146 aa14.89□□□□□ -0.03
SSBP3-214ENST00000533209 RRAGCQ9HB90 399 aa14.89□□□□□ -0.03
SSBP3-214ENST00000533209 CEP126Q9P2H0 1117 aa14.89□□□□□ -0.03
SSBP3-214ENST00000533209 SUPT16HQ9Y5B9 1047 aaKnown RBP14.89□□□□□ -0.03
SSBP3-214ENST00000533209 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
SSBP3-214ENST00000533209 PSMD14O00487 310 aa14.88□□□□□ -0.03
SSBP3-214ENST00000533209 KIF3CO14782 793 aa14.88□□□□□ -0.03
SSBP3-214ENST00000533209 TNIP1Q15025 636 aa14.88□□□□□ -0.03
SSBP3-214ENST00000533209 PUM3Q15397 648 aaKnown RBP14.88□□□□□ -0.03
SSBP3-214ENST00000533209 PODNQ7Z5L7 613 aa14.88□□□□□ -0.03
SSBP3-214ENST00000533209 RPAP2Q8IXW5 612 aaPredicted RBP14.88□□□□□ -0.03
SSBP3-214ENST00000533209 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
SSBP3-214ENST00000533209 NOP58Q9Y2X3 529 aaKnown RBP14.88□□□□□ -0.03
SSBP3-214ENST00000533209 WDR90Q96KV7 1748 aa14.87□□□□□ -0.03
SSBP3-214ENST00000533209 G3BP1Q13283 466 aaKnown RBP eCLIP14.87□□□□□ -0.03
SSBP3-214ENST00000533209 ZNF804AQ7Z570 1209 aa14.87□□□□□ -0.03
SSBP3-214ENST00000533209 FAM84BQ96KN1 310 aaPredicted RBP14.87□□□□□ -0.03
SSBP3-214ENST00000533209 CD209Q9NNX6 404 aa14.87□□□□□ -0.03
SSBP3-214ENST00000533209 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.87□□□□□ -0.03
SSBP3-214ENST00000533209 SURF6O75683 361 aaKnown RBP14.86□□□□□ -0.03
SSBP3-214ENST00000533209 SASH1O94885 1247 aa14.86□□□□□ -0.03
SSBP3-214ENST00000533209 VIL1P09327 827 aaKnown RBP14.86□□□□□ -0.03
SSBP3-214ENST00000533209 VEGFAP15692 232 aaPredicted RBP14.86□□□□□ -0.03
SSBP3-214ENST00000533209 GYG1P46976 350 aa14.86□□□□□ -0.03
SSBP3-214ENST00000533209 GMPSP49915 693 aaPredicted RBP14.86□□□□□ -0.03
SSBP3-214ENST00000533209 SCNN1DP51172 638 aa14.86□□□□□ -0.03
SSBP3-214ENST00000533209 TFCP2Q12800 502 aa14.86□□□□□ -0.03
SSBP3-214ENST00000533209 ATP2B3Q16720 1220 aa14.86□□□□□ -0.03
SSBP3-214ENST00000533209 FBXO33Q7Z6M2 555 aa14.86□□□□□ -0.03
SSBP3-214ENST00000533209 LPIN2Q92539 896 aa14.86□□□□□ -0.03
SSBP3-214ENST00000533209 USP17L3A6NCW0 530 aa14.85□□□□□ -0.03
SSBP3-214ENST00000533209 USP17L4A6NCW7 530 aa14.85□□□□□ -0.03
SSBP3-214ENST00000533209 IFIT1P09914 478 aaKnown RBP14.85□□□□□ -0.03
SSBP3-214ENST00000533209 SLC5A1P13866 664 aa14.85□□□□□ -0.03
SSBP3-214ENST00000533209 IL1R1P14778 569 aa14.85□□□□□ -0.03
SSBP3-214ENST00000533209 HIBADHP31937 336 aaKnown RBP14.85□□□□□ -0.03
SSBP3-214ENST00000533209 USP17L1Q7RTZ2 530 aa14.85□□□□□ -0.03
SSBP3-214ENST00000533209 SCN9AQ15858 1988 aa14.85□□□□□ -0.03
SSBP3-214ENST00000533209 HMMRO75330 724 aa14.84□□□□□ -0.03
SSBP3-214ENST00000533209 TDRD7Q8NHU6 1098 aaKnown RBP14.84□□□□□ -0.03
SSBP3-214ENST00000533209 HACL1Q9UJ83 578 aa14.84□□□□□ -0.03
SSBP3-214ENST00000533209 ZBTB12Q9Y330 459 aaPredicted RBP14.84□□□□□ -0.03
SSBP3-214ENST00000533209 IQCA1LA6NCM1 817 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 EPS15P42566 896 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 BCAMP50895 628 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 OS9Q13438 667 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-214ENST00000533209 CAVIN4Q5BKX8 364 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 DACT2Q5SW24 774 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 STRIP1Q5VSL9 837 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 RSBN1LQ6PCB5 846 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-214ENST00000533209 DPF2Q92785 391 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 GMLQ99445 158 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 TAF1DQ9H5J8 278 aaPredicted RBP14.83□□□□□ -0.04
SSBP3-214ENST00000533209 GPRC5DQ9NZD1 345 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 EXOC6BQ9Y2D4 811 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 AKAP2Q9Y2D5 859 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 ZNF609O15014 1411 aa14.83□□□□□ -0.04
SSBP3-214ENST00000533209 A0A1B0GUL7 405 aa14.82□□□□□ -0.04
SSBP3-214ENST00000533209 RPS12P25398 132 aaKnown RBP14.82□□□□□ -0.04
SSBP3-214ENST00000533209 ADORA1P30542 326 aa14.82□□□□□ -0.04
SSBP3-214ENST00000533209 TIMM10P62072 90 aa14.82□□□□□ -0.04
SSBP3-214ENST00000533209 GTF2IP78347 998 aa14.82□□□□□ -0.04
SSBP3-214ENST00000533209 TTLL5Q6EMB2 1281 aa14.82□□□□□ -0.04
SSBP3-214ENST00000533209 MXD3Q9BW11 206 aa14.82□□□□□ -0.04
SSBP3-214ENST00000533209 PCDHB15Q9Y5E8 787 aa14.82□□□□□ -0.04
SSBP3-214ENST00000533209 SHTN1A0MZ66 631 aa14.81□□□□□ -0.04
SSBP3-214ENST00000533209 LMOD1P29536 600 aaPredicted RBP14.81□□□□□ -0.04
SSBP3-214ENST00000533209 EPHX2P34913 555 aa14.81□□□□□ -0.04
SSBP3-214ENST00000533209 VPS37DQ86XT2 251 aa14.81□□□□□ -0.04
SSBP3-214ENST00000533209 AGBL3Q8NEM8 1001 aa14.81□□□□□ -0.04
SSBP3-214ENST00000533209 FBXW7Q969H0 707 aa14.81□□□□□ -0.04
SSBP3-214ENST00000533209 GPR108Q9NPR9 543 aa14.81□□□□□ -0.04
SSBP3-214ENST00000533209 CNOT7Q9UIV1 285 aaKnown RBP14.81□□□□□ -0.04
SSBP3-214ENST00000533209 HSP90AB4PQ58FF6 505 aa14.8□□□□□ -0.04
SSBP3-214ENST00000533209 TNNI3KQ59H18 835 aa14.8□□□□□ -0.04
SSBP3-214ENST00000533209 MICALL2Q8IY33 904 aa14.8□□□□□ -0.04
SSBP3-214ENST00000533209 EXOC6Q8TAG9 804 aa14.8□□□□□ -0.04
SSBP3-214ENST00000533209 XAGE2Q96GT9 111 aa14.8□□□□□ -0.04
SSBP3-214ENST00000533209 IQSEC3Q9UPP2 1182 aaPredicted RBP14.8□□□□□ -0.04
SSBP3-214ENST00000533209 FPGT-TNNI3KV9GXZ4 949 aa14.8□□□□□ -0.04
SSBP3-214ENST00000533209 FAM205AQ6ZU69 1335 aa14.8□□□□□ -0.04
SSBP3-214ENST00000533209 TOMM70O94826 608 aa14.79□□□□□ -0.04
SSBP3-214ENST00000533209 POTEIP0CG38 1075 aa14.79□□□□□ -0.04
SSBP3-214ENST00000533209 POTEJP0CG39 1038 aa14.79□□□□□ -0.04
SSBP3-214ENST00000533209 SCN4AP35499 1836 aa14.79□□□□□ -0.04
SSBP3-214ENST00000533209 PHKA1P46020 1223 aa14.79□□□□□ -0.04
SSBP3-214ENST00000533209 ERC1Q8IUD2 1116 aa14.79□□□□□ -0.04
SSBP3-214ENST00000533209 C16orf71Q8IYS4 520 aaPredicted RBP14.79□□□□□ -0.04
SSBP3-214ENST00000533209 CERS5Q8N5B7 392 aa14.79□□□□□ -0.04
SSBP3-214ENST00000533209 NEUROD6Q96NK8 337 aa14.79□□□□□ -0.04
SSBP3-214ENST00000533209 ADARB2Q9NS39 739 aaKnown RBP14.79□□□□□ -0.04
SSBP3-214ENST00000533209 JAG2Q9Y219 1238 aa14.79□□□□□ -0.04
SSBP3-214ENST00000533209 ZNF646O15015 1829 aaPredicted RBP14.78□□□□□ -0.04
SSBP3-214ENST00000533209 PSME4Q14997 1843 aa14.78□□□□□ -0.04
SSBP3-214ENST00000533209 MYO3BQ8WXR4 1341 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms