RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 HACL1Q9UJ83 578 aa17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 FBXO3Q9UK99 471 aa17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 PA2G4Q9UQ80 394 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 ZBTB12Q9Y330 459 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 ADAMTSL1Q8N6G6 1762 aa17.42■□□□□ 0.38
TSPAN4-220ENST00000532375 IQCA1LA6NCM1 817 aa17.41■□□□□ 0.38
TSPAN4-220ENST00000532375 PDE8BO95263 885 aa17.41■□□□□ 0.38
TSPAN4-220ENST00000532375 MS4A1P11836 297 aa17.41■□□□□ 0.38
TSPAN4-220ENST00000532375 FGFR2P21802 821 aa17.41■□□□□ 0.38
TSPAN4-220ENST00000532375 EPHX2P34913 555 aa17.41■□□□□ 0.38
TSPAN4-220ENST00000532375 GMLQ99445 158 aa17.41■□□□□ 0.38
TSPAN4-220ENST00000532375 COA1Q9GZY4 146 aa17.41■□□□□ 0.38
TSPAN4-220ENST00000532375 GPRC5DQ9NZD1 345 aa17.41■□□□□ 0.38
TSPAN4-220ENST00000532375 SHTN1A0MZ66 631 aa17.4■□□□□ 0.38
TSPAN4-220ENST00000532375 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
TSPAN4-220ENST00000532375 CIAO1O76071 339 aa17.4■□□□□ 0.38
TSPAN4-220ENST00000532375 ATP8B2P98198 1209 aa17.4■□□□□ 0.38
TSPAN4-220ENST00000532375 POLA2Q14181 598 aa17.4■□□□□ 0.38
TSPAN4-220ENST00000532375 DPF2Q92785 391 aa17.4■□□□□ 0.38
TSPAN4-220ENST00000532375 FAM84BQ96KN1 310 aaPredicted RBP17.4■□□□□ 0.38
TSPAN4-220ENST00000532375 CD209Q9NNX6 404 aa17.4■□□□□ 0.38
TSPAN4-220ENST00000532375 COG6Q9Y2V7 657 aa17.4■□□□□ 0.38
TSPAN4-220ENST00000532375 ZNF609O15014 1411 aa17.39■□□□□ 0.38
TSPAN4-220ENST00000532375 KCNJ4P48050 445 aa17.39■□□□□ 0.37
TSPAN4-220ENST00000532375 PDE3AQ14432 1141 aa17.39■□□□□ 0.37
TSPAN4-220ENST00000532375 MVPQ14764 893 aaKnown RBP17.39■□□□□ 0.37
TSPAN4-220ENST00000532375 METTL24Q5JXM2 366 aa17.39■□□□□ 0.37
TSPAN4-220ENST00000532375 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
TSPAN4-220ENST00000532375 IL1R1P14778 569 aa17.38■□□□□ 0.37
TSPAN4-220ENST00000532375 DACT2Q5SW24 774 aa17.38■□□□□ 0.37
TSPAN4-220ENST00000532375 FBXO33Q7Z6M2 555 aa17.38■□□□□ 0.37
TSPAN4-220ENST00000532375 SSH3Q8TE77 659 aa17.38■□□□□ 0.37
TSPAN4-220ENST00000532375 SIL1Q9H173 461 aa17.38■□□□□ 0.37
TSPAN4-220ENST00000532375 ZBTB40Q9NUA8 1239 aa17.38■□□□□ 0.37
TSPAN4-220ENST00000532375 CNOT7Q9UIV1 285 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-220ENST00000532375 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.38■□□□□ 0.37
TSPAN4-220ENST00000532375 USP17L3A6NCW0 530 aa17.37■□□□□ 0.37
TSPAN4-220ENST00000532375 USP17L4A6NCW7 530 aa17.37■□□□□ 0.37
TSPAN4-220ENST00000532375 RPS12P25398 132 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-220ENST00000532375 IL15P40933 162 aaPredicted RBP17.37■□□□□ 0.37
TSPAN4-220ENST00000532375 HIRAP54198 1017 aaPredicted RBP17.37■□□□□ 0.37
TSPAN4-220ENST00000532375 RSBN1LQ6PCB5 846 aaPredicted RBP17.37■□□□□ 0.37
TSPAN4-220ENST00000532375 USP17L1Q7RTZ2 530 aa17.37■□□□□ 0.37
TSPAN4-220ENST00000532375 G3V3G9 751 aa17.36■□□□□ 0.37
TSPAN4-220ENST00000532375 GYG1P46976 350 aa17.36■□□□□ 0.37
TSPAN4-220ENST00000532375 FSTL1Q12841 308 aa17.36■□□□□ 0.37
TSPAN4-220ENST00000532375 DCAF8Q5TAQ9 597 aa17.36■□□□□ 0.37
TSPAN4-220ENST00000532375 STRIP1Q5VSL9 837 aa17.36■□□□□ 0.37
TSPAN4-220ENST00000532375 C16orf71Q8IYS4 520 aaPredicted RBP17.36■□□□□ 0.37
TSPAN4-220ENST00000532375 AGBL3Q8NEM8 1001 aa17.36■□□□□ 0.37
TSPAN4-220ENST00000532375 TDRD7Q8NHU6 1098 aaKnown RBP17.36■□□□□ 0.37
TSPAN4-220ENST00000532375 MXD3Q9BW11 206 aa17.36■□□□□ 0.37
TSPAN4-220ENST00000532375 EGFRP00533 1210 aa17.35■□□□□ 0.37
TSPAN4-220ENST00000532375 LMOD1P29536 600 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-220ENST00000532375 CEP85Q6P2H3 762 aa17.35■□□□□ 0.37
TSPAN4-220ENST00000532375 USP50Q70EL3 339 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-220ENST00000532375 PNMA8AQ86V59 439 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-220ENST00000532375 LDHDQ86WU2 507 aa17.35■□□□□ 0.37
TSPAN4-220ENST00000532375 SMC1BQ8NDV3 1235 aa17.35■□□□□ 0.37
TSPAN4-220ENST00000532375 ADARB2Q9NS39 739 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-220ENST00000532375 PGAP2Q9UHJ9 254 aa17.35■□□□□ 0.37
TSPAN4-220ENST00000532375 DDX19BQ9UMR2 479 aa17.35■□□□□ 0.37
TSPAN4-220ENST00000532375 ITGBL1O95965 494 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 HIBADHP31937 336 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 ZNF280AP59817 542 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 GTF2IP78347 998 aa17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 PUM3Q15397 648 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 TTLL5Q6EMB2 1281 aa17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 MICALL2Q8IY33 904 aa17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 TRPM4Q8TD43 1214 aa17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 CEP126Q9P2H0 1117 aa17.34■□□□□ 0.37
TSPAN4-220ENST00000532375 POLR2AP24928 1970 aaKnown RBP17.33■□□□□ 0.37
TSPAN4-220ENST00000532375 FAM205AQ6ZU69 1335 aa17.33■□□□□ 0.36
TSPAN4-220ENST00000532375 SASH1O94885 1247 aa17.33■□□□□ 0.36
TSPAN4-220ENST00000532375 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
TSPAN4-220ENST00000532375 SAMD7Q7Z3H4 446 aa17.33■□□□□ 0.36
TSPAN4-220ENST00000532375 ZNF804AQ7Z570 1209 aa17.33■□□□□ 0.36
TSPAN4-220ENST00000532375 SIRT2Q8IXJ6 389 aa17.33■□□□□ 0.36
TSPAN4-220ENST00000532375 CERS5Q8N5B7 392 aa17.33■□□□□ 0.36
TSPAN4-220ENST00000532375 LPIN2Q92539 896 aa17.33■□□□□ 0.36
TSPAN4-220ENST00000532375 NOP58Q9Y2X3 529 aaKnown RBP17.33■□□□□ 0.36
TSPAN4-220ENST00000532375 BCAMP50895 628 aa17.32■□□□□ 0.36
TSPAN4-220ENST00000532375 RRP1P56182 461 aaKnown RBP17.32■□□□□ 0.36
TSPAN4-220ENST00000532375 H7C1D1 291 aa17.31■□□□□ 0.36
TSPAN4-220ENST00000532375 HSPA6P17066 643 aa17.31■□□□□ 0.36
TSPAN4-220ENST00000532375 TFCP2Q12800 502 aa17.31■□□□□ 0.36
TSPAN4-220ENST00000532375 IFFO2Q5TF58 517 aa17.31■□□□□ 0.36
TSPAN4-220ENST00000532375 ZBTB22O15209 634 aa17.3■□□□□ 0.36
TSPAN4-220ENST00000532375 IFIT1P09914 478 aaKnown RBP17.3■□□□□ 0.36
TSPAN4-220ENST00000532375 USP17L8P0C7I0 530 aa17.3■□□□□ 0.36
TSPAN4-220ENST00000532375 TIMM10P62072 90 aa17.3■□□□□ 0.36
TSPAN4-220ENST00000532375 FKBP1AP62942 108 aaKnown RBP17.3■□□□□ 0.36
TSPAN4-220ENST00000532375 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
TSPAN4-220ENST00000532375 MAP1SQ66K74 1059 aaPredicted RBP17.3■□□□□ 0.36
TSPAN4-220ENST00000532375 ARAP2Q8WZ64 1704 aa17.3■□□□□ 0.36
TSPAN4-220ENST00000532375 MYO3BQ8WXR4 1341 aa17.29■□□□□ 0.36
TSPAN4-220ENST00000532375 PASKQ96RG2 1323 aa17.29■□□□□ 0.36
TSPAN4-220ENST00000532375 SLC5A1P13866 664 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms