RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 SPEF2Q9C093 1822 aa18.55■□□□□ 0.56
CTSB-221ENST00000531502 DACT2Q5SW24 774 aa18.54■□□□□ 0.56
CTSB-221ENST00000531502 CHMP4AQ9BY43 222 aa18.54■□□□□ 0.56
CTSB-221ENST00000531502 SCAF8Q9UPN6 1271 aaKnown RBP18.54■□□□□ 0.56
CTSB-221ENST00000531502 TNRC18O15417 2968 aaPredicted RBP18.53■□□□□ 0.56
CTSB-221ENST00000531502 CWF19L2Q2TBE0 894 aaKnown RBP18.53■□□□□ 0.56
CTSB-221ENST00000531502 NBPF9Q3BBW0 867 aa18.53■□□□□ 0.56
CTSB-221ENST00000531502 MOB2Q70IA6 237 aa18.53■□□□□ 0.56
CTSB-221ENST00000531502 MXD3Q9BW11 206 aa18.53■□□□□ 0.56
CTSB-221ENST00000531502 NEURL1BA8MQ27 555 aa18.52■□□□□ 0.56
CTSB-221ENST00000531502 CCT4P50991 539 aaKnown RBP18.52■□□□□ 0.56
CTSB-221ENST00000531502 G2E3Q7L622 706 aa18.52■□□□□ 0.56
CTSB-221ENST00000531502 TXNRD3Q86VQ6 643 aa18.52■□□□□ 0.56
CTSB-221ENST00000531502 REM2Q8IYK8 340 aaPredicted RBP18.52■□□□□ 0.56
CTSB-221ENST00000531502 TSR2Q969E8 191 aaKnown RBP18.52■□□□□ 0.56
CTSB-221ENST00000531502 H7C1W4 665 aa18.51■□□□□ 0.55
CTSB-221ENST00000531502 WNT10BO00744 389 aa18.5■□□□□ 0.55
CTSB-221ENST00000531502 STRIP1Q5VSL9 837 aa18.5■□□□□ 0.55
CTSB-221ENST00000531502 PRAMEF18Q5VWM3 479 aa18.5■□□□□ 0.55
CTSB-221ENST00000531502 COA1Q9GZY4 146 aa18.5■□□□□ 0.55
CTSB-221ENST00000531502 UBE2Q2LH0YL09 131 aa18.49■□□□□ 0.55
CTSB-221ENST00000531502 CASP7P55210 303 aa18.49■□□□□ 0.55
CTSB-221ENST00000531502 NEXNQ0ZGT2 675 aa18.49■□□□□ 0.55
CTSB-221ENST00000531502 CTU1Q7Z7A3 348 aaKnown RBP18.49■□□□□ 0.55
CTSB-221ENST00000531502 PLA2G12BQ9BX93 195 aa18.49■□□□□ 0.55
CTSB-221ENST00000531502 LEMD3Q9Y2U8 911 aa18.49■□□□□ 0.55
CTSB-221ENST00000531502 MYO3BQ8WXR4 1341 aa18.49■□□□□ 0.55
CTSB-221ENST00000531502 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
CTSB-221ENST00000531502 UBE3BQ7Z3V4 1068 aa18.48■□□□□ 0.55
CTSB-221ENST00000531502 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
CTSB-221ENST00000531502 KLRK1P26718 216 aa18.47■□□□□ 0.55
CTSB-221ENST00000531502 GCKRQ14397 625 aa18.47■□□□□ 0.55
CTSB-221ENST00000531502 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
CTSB-221ENST00000531502 CCDC184Q52MB2 194 aa18.47■□□□□ 0.55
CTSB-221ENST00000531502 ZBED3Q96IU2 234 aaPredicted RBP18.47■□□□□ 0.55
CTSB-221ENST00000531502 PDE4DIPQ5VU43 2346 aa18.46■□□□□ 0.55
CTSB-221ENST00000531502 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
CTSB-221ENST00000531502 CSF1RP07333 972 aa18.46■□□□□ 0.55
CTSB-221ENST00000531502 ITGA6P23229 1130 aa18.46■□□□□ 0.55
CTSB-221ENST00000531502 MMP14P50281 582 aa18.46■□□□□ 0.55
CTSB-221ENST00000531502 WWC1Q8IX03 1113 aa18.46■□□□□ 0.55
CTSB-221ENST00000531502 OGFOD1Q8N543 542 aa18.46■□□□□ 0.55
CTSB-221ENST00000531502 ZNF804BA4D1E1 1349 aa18.46■□□□□ 0.55
CTSB-221ENST00000531502 SASH1O94885 1247 aa18.45■□□□□ 0.54
CTSB-221ENST00000531502 IGHMBP2P38935 993 aaKnown RBP18.45■□□□□ 0.54
CTSB-221ENST00000531502 TM4SF4P48230 202 aa18.45■□□□□ 0.54
CTSB-221ENST00000531502 SOX10P56693 466 aa18.45■□□□□ 0.54
CTSB-221ENST00000531502 TTLL5Q6EMB2 1281 aa18.45■□□□□ 0.54
CTSB-221ENST00000531502 FBXW7Q969H0 707 aa18.45■□□□□ 0.54
CTSB-221ENST00000531502 IRS2Q9Y4H2 1338 aa18.45■□□□□ 0.54
CTSB-221ENST00000531502 TBC1D8O95759 1140 aa18.44■□□□□ 0.54
CTSB-221ENST00000531502 FLIIQ13045 1269 aa18.44■□□□□ 0.54
CTSB-221ENST00000531502 ANKRD2Q9GZV1 360 aa18.44■□□□□ 0.54
CTSB-221ENST00000531502 KIAA0825Q8IV33 1275 aa18.43■□□□□ 0.54
CTSB-221ENST00000531502 ZNF296Q8WUU4 475 aaPredicted RBP18.43■□□□□ 0.54
CTSB-221ENST00000531502 IL16Q14005 1332 aa18.43■□□□□ 0.54
CTSB-221ENST00000531502 CACNA1FO60840 1977 aa18.42■□□□□ 0.54
CTSB-221ENST00000531502 GTF2IP78347 998 aa18.42■□□□□ 0.54
CTSB-221ENST00000531502 PTPN12Q05209 780 aaKnown RBP18.42■□□□□ 0.54
CTSB-221ENST00000531502 CHRNDQ07001 517 aa18.42■□□□□ 0.54
CTSB-221ENST00000531502 TTLL12Q14166 644 aaPredicted RBP18.42■□□□□ 0.54
CTSB-221ENST00000531502 NOM1Q5C9Z4 860 aaKnown RBP18.42■□□□□ 0.54
CTSB-221ENST00000531502 DNAAF4Q8WXU2 420 aa18.42■□□□□ 0.54
CTSB-221ENST00000531502 MPHOSPH8Q99549 860 aa18.42■□□□□ 0.54
CTSB-221ENST00000531502 HPS5Q9UPZ3 1129 aa18.42■□□□□ 0.54
CTSB-221ENST00000531502 A0A1B0GUL6 1792 aa18.41■□□□□ 0.54
CTSB-221ENST00000531502 SNAP23O00161 211 aa18.41■□□□□ 0.54
CTSB-221ENST00000531502 NF2P35240 595 aa18.41■□□□□ 0.54
CTSB-221ENST00000531502 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
CTSB-221ENST00000531502 LDLRAD1Q5T700 205 aa18.41■□□□□ 0.54
CTSB-221ENST00000531502 APOBEC3FQ8IUX4 373 aaKnown RBP18.41■□□□□ 0.54
CTSB-221ENST00000531502 LINS1Q8NG48 757 aa18.41■□□□□ 0.54
CTSB-221ENST00000531502 CFHR5Q9BXR6 569 aa18.41■□□□□ 0.54
CTSB-221ENST00000531502 CD209Q9NNX6 404 aa18.41■□□□□ 0.54
CTSB-221ENST00000531502 GPR25O00155 361 aa18.4■□□□□ 0.54
CTSB-221ENST00000531502 MKRN3Q13064 507 aaKnown RBP18.4■□□□□ 0.54
CTSB-221ENST00000531502 PKN2Q16513 984 aaKnown RBP18.4■□□□□ 0.54
CTSB-221ENST00000531502 C15orf52Q6ZUT6 534 aaKnown RBP18.4■□□□□ 0.54
CTSB-221ENST00000531502 CERS5Q8N5B7 392 aa18.4■□□□□ 0.54
CTSB-221ENST00000531502 MYH16Q9H6N6 1097 aa18.4■□□□□ 0.54
CTSB-221ENST00000531502 HDAC9Q9UKV0 1011 aa18.4■□□□□ 0.54
CTSB-221ENST00000531502 FOXO4P98177 505 aa18.39■□□□□ 0.53
CTSB-221ENST00000531502 FKBP5Q13451 457 aaPredicted RBP18.39■□□□□ 0.53
CTSB-221ENST00000531502 ARMC9Q7Z3E5 817 aa18.39■□□□□ 0.53
CTSB-221ENST00000531502 MTMR14Q8NCE2 650 aa18.39■□□□□ 0.53
CTSB-221ENST00000531502 R3HDMLQ9H3Y0 253 aa18.39■□□□□ 0.53
CTSB-221ENST00000531502 FANCIQ9NVI1 1328 aa18.39■□□□□ 0.53
CTSB-221ENST00000531502 COL1A1P02452 1464 aaPredicted RBP18.39■□□□□ 0.53
CTSB-221ENST00000531502 VAMP4O75379 141 aa18.38■□□□□ 0.53
CTSB-221ENST00000531502 TAF5LO75529 589 aa18.38■□□□□ 0.53
CTSB-221ENST00000531502 PRKG1Q13976 671 aa18.38■□□□□ 0.53
CTSB-221ENST00000531502 FZD1Q9UP38 647 aa18.38■□□□□ 0.53
CTSB-221ENST00000531502 PCDHAC2Q9Y5I4 1007 aa18.38■□□□□ 0.53
CTSB-221ENST00000531502 SSC5DA1L4H1 1573 aa18.38■□□□□ 0.53
CTSB-221ENST00000531502 ECM29Q5VYK3 1845 aa18.37■□□□□ 0.53
CTSB-221ENST00000531502 ANKRD18BA2A2Z9 1011 aa18.37■□□□□ 0.53
CTSB-221ENST00000531502 KCNJ4P48050 445 aa18.37■□□□□ 0.53
CTSB-221ENST00000531502 SREBF2Q12772 1141 aa18.37■□□□□ 0.53
CTSB-221ENST00000531502 MAP3K11Q16584 847 aa18.37■□□□□ 0.53
CTSB-221ENST00000531502 SPRYD7Q5W111 196 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms