RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 COL4A1P02462 1669 aa10.38□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 UQCRFS1P1P0C7P4 283 aa10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 GYG1P46976 350 aa10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 BCAMP50895 628 aa10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 BMP2KLQ5H9B9 411 aa10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 CCDC102BQ68D86 513 aa10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 CC2D2BQ6DHV5 1058 aa10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 TBC1D16Q8TBP0 767 aa10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 PI4K2BQ8TCG2 481 aa10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 GPR101Q96P66 508 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 DNAJC2Q99543 621 aaKnown RBP10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 PODXL2Q9NZ53 605 aa10.37□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 LRP5O75197 1615 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 G3V3G9 751 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 RIMBP2O15034 1052 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 FRAT2O75474 233 aaPredicted RBP10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 GSPT1P15170 499 aaKnown RBP10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 SDSP20132 328 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 KLRK1P26718 216 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 HIBADHP31937 336 aaKnown RBP10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 PHKA1P46020 1223 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 FKBP4Q02790 459 aaKnown RBP eCLIP10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 DCAF8Q5TAQ9 597 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 NLGN2Q8NFZ4 835 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 C7orf43Q8WVR3 580 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 FAM84BQ96KN1 310 aaPredicted RBP10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 EYA3Q99504 573 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 FHDC1Q9C0D6 1143 aaPredicted RBP10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 ZC3H12CQ9C0D7 883 aaKnown RBP10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 SNRKQ9NRH2 765 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 POLLQ9UGP5 575 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 BCS1LQ9Y276 419 aa10.36□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 MYH3P11055 1940 aa10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 WASHC4Q2M389 1173 aa10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 GRIPAP1Q4V328 841 aa10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 CCDC93Q567U6 631 aa10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 SOGA3Q5TF21 947 aa10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 ZNF804AQ7Z570 1209 aa10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 FBXO33Q7Z6M2 555 aa10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 RTKN2Q8IZC4 609 aa10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 CNTROBQ8N137 903 aa10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 HAUS7Q99871 368 aa10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 IQSEC3Q9UPP2 1182 aaPredicted RBP10.35□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 ANKRD31Q8N7Z5 1873 aa10.34□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 GOLIM4O00461 696 aa10.34□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 SCARF1Q14162 830 aa10.34□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 TXNRD3Q86VQ6 643 aa10.34□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 SPATA5Q8NB90 893 aa10.34□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 SUPT20HQ8NEM7 779 aa10.34□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 EVI5LQ96CN4 794 aa10.34□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 ZNF512BQ96KM6 892 aaPredicted RBP10.34□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 PAG1Q9NWQ8 432 aa10.34□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 NDUFB9Q9Y6M9 179 aa10.34□□□□□ -0.75
NEDD8-MDP1-201ENST00000530579 CDC45O75419 566 aa10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 ARID4AP29374 1257 aaPredicted RBP10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 MCAMP43121 646 aa10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 ZAP70P43403 619 aa10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 DOK7Q18PE1 504 aa10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 CASC1Q6TDU7 716 aa10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 C15orf52Q6ZUT6 534 aaKnown RBP10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 EDC3Q96F86 508 aaKnown RBP10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 SYT17Q9BSW7 474 aa10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 FSD1Q9BTV5 496 aa10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 HMG20BQ9P0W2 317 aa10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 DENND2AQ9ULE3 1009 aa10.33□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 SEMA3EO15041 775 aa10.32□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 CHAF1AQ13111 956 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 RASGRF1Q13972 1273 aa10.32□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 PI16Q6UXB8 463 aa10.32□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 RTFDC1Q9BY42 306 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 COL11A2P13942 1736 aaPredicted RBP10.32□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 IRS2Q9Y4H2 1338 aa10.32□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 MED23Q9ULK4 1368 aa10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 PPIP5K2O43314 1243 aa10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 TTF1Q15361 905 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 TBC1D9Q6ZT07 1266 aa10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 FBXW7Q969H0 707 aa10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 COA1Q9GZY4 146 aa10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 ANTXR1Q9H6X2 564 aa10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 CD209Q9NNX6 404 aa10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 ZNF277Q9NRM2 450 aaPredicted RBP10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 DIAPH3Q9NSV4 1193 aa10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 TAF1P21675 1872 aa10.31□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 IDH1O75874 414 aaKnown RBP10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 CYP2E1P05181 493 aaPredicted RBP10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 CHMLP26374 656 aa10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 AOC3Q16853 763 aa10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 LRRFIP1Q32MZ4 808 aaKnown RBP10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 ARHGAP27Q6ZUM4 889 aa10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 LARGE2Q8N3Y3 721 aa10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 KBTBD3Q8NAB2 608 aa10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 TDRD7Q8NHU6 1098 aaKnown RBP10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 PSMD1Q99460 953 aa10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 DBNDD1Q9H9R9 158 aa10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 PIH1D3Q9NQM4 214 aaKnown RBP10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 LRP2BPQ9P2M1 347 aa10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 ABCF2Q9UG63 623 aa10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 JAG2Q9Y219 1238 aa10.3□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 SPEF2Q9C093 1822 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms