RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 ZNF330Q9Y3S2 320 aaPredicted RBP12.65□□□□□ -0.38
PUF60-213ENST00000528999 SPATA31A5Q5VU36 1347 aa12.64□□□□□ -0.39
PUF60-213ENST00000528999 SPATA31A7Q8IWB4 1347 aa12.64□□□□□ -0.39
PUF60-213ENST00000528999 CICQ96RK0 1608 aaPredicted RBP12.64□□□□□ -0.39
PUF60-213ENST00000528999 SYCE3A1L190 88 aa12.64□□□□□ -0.39
PUF60-213ENST00000528999 ESPNB1AK53 854 aa12.64□□□□□ -0.39
PUF60-213ENST00000528999 E7EWF7 191 aa12.64□□□□□ -0.39
PUF60-213ENST00000528999 GADD45BO75293 160 aaPredicted RBP12.64□□□□□ -0.39
PUF60-213ENST00000528999 ARID4AP29374 1257 aaPredicted RBP12.64□□□□□ -0.39
PUF60-213ENST00000528999 MCM5P33992 734 aa12.64□□□□□ -0.39
PUF60-213ENST00000528999 PUM3Q15397 648 aaKnown RBP12.64□□□□□ -0.39
PUF60-213ENST00000528999 CLEC4GQ6UXB4 293 aa12.64□□□□□ -0.39
PUF60-213ENST00000528999 ARXQ96QS3 562 aa12.64□□□□□ -0.39
PUF60-213ENST00000528999 UTP14AQ9BVJ6 771 aaKnown RBP12.64□□□□□ -0.39
PUF60-213ENST00000528999 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
PUF60-213ENST00000528999 VPS37CA5D8V6 355 aaPredicted RBP12.63□□□□□ -0.39
PUF60-213ENST00000528999 DHX16O60231 1041 aaKnown RBP12.63□□□□□ -0.39
PUF60-213ENST00000528999 FGFR2P21802 821 aa12.63□□□□□ -0.39
PUF60-213ENST00000528999 ALX1Q15699 326 aa12.63□□□□□ -0.39
PUF60-213ENST00000528999 OSBP2Q969R2 916 aa12.63□□□□□ -0.39
PUF60-213ENST00000528999 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
PUF60-213ENST00000528999 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
PUF60-213ENST00000528999 TAF6LQ9Y6J9 622 aa12.63□□□□□ -0.39
PUF60-213ENST00000528999 NDUFB9Q9Y6M9 179 aa12.63□□□□□ -0.39
PUF60-213ENST00000528999 WNK3Q9BYP7 1800 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 ANKRD36CQ5JPF3 1778 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 LOC102724428A0A0B4J2F2 783 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 GPTP24298 496 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 ADORA1P30542 326 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 ADD2P35612 726 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 ZAP70P43403 619 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 SIK1P57059 783 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
PUF60-213ENST00000528999 WASHC4Q2M389 1173 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 STOX1Q6ZVD7 989 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 BRF1Q92994 677 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 SYTL4Q96C24 671 aaPredicted RBP12.62□□□□□ -0.39
PUF60-213ENST00000528999 LTBP4Q8N2S1 1624 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 ATRNO75882 1429 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 RIC1Q4ADV7 1423 aa12.62□□□□□ -0.39
PUF60-213ENST00000528999 M0R2C6 588 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 ZNF213O14771 459 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 TOM1O60784 492 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 SLC5A1P13866 664 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 ATP6V1AP38606 617 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 CCDC152Q4G0S7 254 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 MARCH10Q8NA82 808 aaPredicted RBP12.61□□□□□ -0.39
PUF60-213ENST00000528999 NCOA7Q8NI08 942 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 CHAMP1Q96JM3 812 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 CDC5LQ99459 802 aaKnown RBP12.61□□□□□ -0.39
PUF60-213ENST00000528999 ZMYM6O95789 1325 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 RREB1Q92766 1687 aa12.61□□□□□ -0.39
PUF60-213ENST00000528999 H3BQV1 296 aa12.6□□□□□ -0.39
PUF60-213ENST00000528999 FIBPO43427 364 aa12.6□□□□□ -0.39
PUF60-213ENST00000528999 CAMTA2O94983 1202 aa12.6□□□□□ -0.39
PUF60-213ENST00000528999 FGAP02671 866 aa12.6□□□□□ -0.39
PUF60-213ENST00000528999 PDIA3P30101 505 aaKnown RBP12.6□□□□□ -0.39
PUF60-213ENST00000528999 CRKLP46109 303 aaKnown RBP12.6□□□□□ -0.39
PUF60-213ENST00000528999 SCRN1Q12765 414 aa12.6□□□□□ -0.39
PUF60-213ENST00000528999 IFFO2Q5TF58 517 aa12.6□□□□□ -0.39
PUF60-213ENST00000528999 SUSD4Q5VX71 490 aa12.6□□□□□ -0.39
PUF60-213ENST00000528999 ZSCAN30Q86W11 494 aa12.6□□□□□ -0.39
PUF60-213ENST00000528999 GDPD2Q9HCC8 539 aa12.6□□□□□ -0.39
PUF60-213ENST00000528999 RRAGDQ9NQL2 400 aaPredicted RBP12.6□□□□□ -0.39
PUF60-213ENST00000528999 UBN2Q6ZU65 1347 aa12.6□□□□□ -0.39
PUF60-213ENST00000528999 NRAPQ86VF7 1730 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 NWD2Q9ULI1 1742 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 SLIT2O94813 1529 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 GOLGA6L4A6NEF3 574 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 ZBTB22O15209 634 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 GPAA1O43292 621 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 IGSF3O75054 1194 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 CAVIN2O95810 425 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 MCAMP43121 646 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 TRDNQ13061 729 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 RESTQ13127 1097 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 CCDC102BQ68D86 513 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 TMED8Q6PL24 325 aaPredicted RBP12.59□□□□□ -0.39
PUF60-213ENST00000528999 CDC37L1Q7L3B6 337 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 SYNE4Q8N205 404 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 NSUN7Q8NE18 718 aaKnown RBP12.59□□□□□ -0.39
PUF60-213ENST00000528999 TCEANC2Q96MN5 208 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 ZNF396Q96N95 335 aaPredicted RBP12.59□□□□□ -0.39
PUF60-213ENST00000528999 MPHOSPH8Q99549 860 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 MTA3Q9BTC8 594 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 DDX19AQ9NUU7 478 aaKnown RBP12.59□□□□□ -0.39
PUF60-213ENST00000528999 CCDC39Q9UFE4 941 aa12.59□□□□□ -0.39
PUF60-213ENST00000528999 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
PUF60-213ENST00000528999 NUP98P52948 1817 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 CHGBP05060 677 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 GNAT2P19087 354 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 IGHMBP2P38935 993 aaKnown RBP12.58□□□□□ -0.4
PUF60-213ENST00000528999 MAP3K12Q12852 859 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 STK3Q13188 491 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 SCARF1Q14162 830 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 FOXD4L6Q3SYB3 417 aaPredicted RBP12.58□□□□□ -0.4
PUF60-213ENST00000528999 SLC10A5Q5PT55 438 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 SLC9C2Q5TAH2 1124 aa12.58□□□□□ -0.4
PUF60-213ENST00000528999 RC3H1Q5TC82 1133 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms