RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 VAMP4O75379 141 aa26.65■■□□□ 1.86
PKP3-205ENST00000527442 CCDC152Q4G0S7 254 aa26.65■■□□□ 1.86
PKP3-205ENST00000527442 JARID2Q92833 1246 aaPredicted RBP26.65■■□□□ 1.86
PKP3-205ENST00000527442 GMLQ99445 158 aa26.65■■□□□ 1.86
PKP3-205ENST00000527442 CTU1Q7Z7A3 348 aaKnown RBP26.64■■□□□ 1.86
PKP3-205ENST00000527442 MYOZ2Q9NPC6 264 aa26.64■■□□□ 1.86
PKP3-205ENST00000527442 PDE8AO60658 829 aa26.63■■□□□ 1.85
PKP3-205ENST00000527442 PCCAP05165 728 aaPredicted RBP26.63■■□□□ 1.85
PKP3-205ENST00000527442 HSP90B1P14625 803 aaKnown RBP26.63■■□□□ 1.85
PKP3-205ENST00000527442 MOB2Q70IA6 237 aa26.63■■□□□ 1.85
PKP3-205ENST00000527442 SCAF8Q9UPN6 1271 aaKnown RBP26.63■■□□□ 1.85
PKP3-205ENST00000527442 XDHP47989 1333 aa26.63■■□□□ 1.85
PKP3-205ENST00000527442 CACNA1FO60840 1977 aa26.62■■□□□ 1.85
PKP3-205ENST00000527442 USP17L8P0C7I0 530 aa26.62■■□□□ 1.85
PKP3-205ENST00000527442 FKBP1BP68106 108 aa26.62■■□□□ 1.85
PKP3-205ENST00000527442 CCDC191Q8NCU4 936 aa26.62■■□□□ 1.85
PKP3-205ENST00000527442 PITPNM2Q9BZ72 1349 aa26.62■■□□□ 1.85
PKP3-205ENST00000527442 RARSP54136 660 aaKnown RBP26.61■■□□□ 1.85
PKP3-205ENST00000527442 ALDH1L2Q3SY69 923 aa26.61■■□□□ 1.85
PKP3-205ENST00000527442 REM2Q8IYK8 340 aaPredicted RBP26.61■■□□□ 1.85
PKP3-205ENST00000527442 WTIPA6NIX2 430 aaPredicted RBP26.6■■□□□ 1.85
PKP3-205ENST00000527442 ELL2O00472 640 aaPredicted RBP26.6■■□□□ 1.85
PKP3-205ENST00000527442 ANKRD18AQ8IVF6 992 aa26.6■■□□□ 1.85
PKP3-205ENST00000527442 CWC25Q9NXE8 425 aaPredicted RBP26.6■■□□□ 1.85
PKP3-205ENST00000527442 USP17L3A6NCW0 530 aa26.59■■□□□ 1.85
PKP3-205ENST00000527442 USP17L4A6NCW7 530 aa26.59■■□□□ 1.85
PKP3-205ENST00000527442 USP17L1Q7RTZ2 530 aa26.59■■□□□ 1.85
PKP3-205ENST00000527442 ATP2B4P23634 1241 aa26.58■■□□□ 1.85
PKP3-205ENST00000527442 UBE2Q2LH0YL09 131 aa26.57■■□□□ 1.84
PKP3-205ENST00000527442 PRAMEF18Q5VWM3 479 aa26.57■■□□□ 1.84
PKP3-205ENST00000527442 PODNQ7Z5L7 613 aa26.57■■□□□ 1.84
PKP3-205ENST00000527442 CHMP4AQ9BY43 222 aa26.57■■□□□ 1.84
PKP3-205ENST00000527442 MED23Q9ULK4 1368 aa26.57■■□□□ 1.84
PKP3-205ENST00000527442 NBPF9Q3BBW0 867 aa26.56■■□□□ 1.84
PKP3-205ENST00000527442 METTL22Q9BUU2 404 aaPredicted RBP26.56■■□□□ 1.84
PKP3-205ENST00000527442 MXD3Q9BW11 206 aa26.56■■□□□ 1.84
PKP3-205ENST00000527442 PCDH10Q9P2E7 1040 aa26.56■■□□□ 1.84
PKP3-205ENST00000527442 HPS5Q9UPZ3 1129 aa26.56■■□□□ 1.84
PKP3-205ENST00000527442 SSH1Q8WYL5 1049 aa26.55■■□□□ 1.84
PKP3-205ENST00000527442 TBC1D8O95759 1140 aa26.54■■□□□ 1.84
PKP3-205ENST00000527442 CTSWP56202 376 aa26.54■■□□□ 1.84
PKP3-205ENST00000527442 DACT2Q5SW24 774 aa26.53■■□□□ 1.84
PKP3-205ENST00000527442 CCDC30Q5VVM6 783 aa26.53■■□□□ 1.84
PKP3-205ENST00000527442 ZNF296Q8WUU4 475 aaPredicted RBP26.53■■□□□ 1.84
PKP3-205ENST00000527442 CDC5LQ99459 802 aaKnown RBP26.53■■□□□ 1.84
PKP3-205ENST00000527442 SMC4Q9NTJ3 1288 aa26.53■■□□□ 1.84
PKP3-205ENST00000527442 MINPP1Q9UNW1 487 aa26.52■■□□□ 1.84
PKP3-205ENST00000527442 MAP3K2Q9Y2U5 619 aa26.52■■□□□ 1.84
PKP3-205ENST00000527442 KIF16BQ96L93 1317 aa26.51■■□□□ 1.83
PKP3-205ENST00000527442 BCAR3O75815 825 aa26.51■■□□□ 1.83
PKP3-205ENST00000527442 DDX58O95786 925 aaKnown RBP26.51■■□□□ 1.83
PKP3-205ENST00000527442 TTLL12Q14166 644 aaPredicted RBP26.51■■□□□ 1.83
PKP3-205ENST00000527442 TTLL11Q8NHH1 800 aa26.51■■□□□ 1.83
PKP3-205ENST00000527442 GREM2Q9H772 168 aa26.51■■□□□ 1.83
PKP3-205ENST00000527442 HDAC9Q9UKV0 1011 aa26.51■■□□□ 1.83
PKP3-205ENST00000527442 SUPT16HQ9Y5B9 1047 aaKnown RBP26.51■■□□□ 1.83
PKP3-205ENST00000527442 WNT10BO00744 389 aa26.5■■□□□ 1.83
PKP3-205ENST00000527442 IGKV5-2P06315 115 aa26.5■■□□□ 1.83
PKP3-205ENST00000527442 RRP1P56182 461 aaKnown RBP26.5■■□□□ 1.83
PKP3-205ENST00000527442 MRPL50Q8N5N7 158 aaKnown RBP26.5■■□□□ 1.83
PKP3-205ENST00000527442 FBXW7Q969H0 707 aa26.5■■□□□ 1.83
PKP3-205ENST00000527442 SASH1O94885 1247 aa26.49■■□□□ 1.83
PKP3-205ENST00000527442 CCT4P50991 539 aaKnown RBP26.49■■□□□ 1.83
PKP3-205ENST00000527442 MKRN3Q13064 507 aaKnown RBP26.49■■□□□ 1.83
PKP3-205ENST00000527442 PKN2Q16513 984 aaKnown RBP26.49■■□□□ 1.83
PKP3-205ENST00000527442 PRPF38BQ5VTL8 546 aaKnown RBP26.49■■□□□ 1.83
PKP3-205ENST00000527442 BSDC1Q9NW68 430 aaPredicted RBP26.49■■□□□ 1.83
PKP3-205ENST00000527442 TM4SF4P48230 202 aa26.48■■□□□ 1.83
PKP3-205ENST00000527442 TXNRD3Q86VQ6 643 aa26.48■■□□□ 1.83
PKP3-205ENST00000527442 STK31Q9BXU1 1019 aa26.48■■□□□ 1.83
PKP3-205ENST00000527442 MYO3BQ8WXR4 1341 aa26.47■■□□□ 1.83
PKP3-205ENST00000527442 STRIP1Q5VSL9 837 aa26.47■■□□□ 1.83
PKP3-205ENST00000527442 OGFOD1Q8N543 542 aa26.47■■□□□ 1.83
PKP3-205ENST00000527442 GPR25O00155 361 aa26.46■■□□□ 1.83
PKP3-205ENST00000527442 NF2P35240 595 aa26.46■■□□□ 1.83
PKP3-205ENST00000527442 KSR2Q6VAB6 950 aa26.46■■□□□ 1.83
PKP3-205ENST00000527442 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.46■■□□□ 1.83
PKP3-205ENST00000527442 ECM29Q5VYK3 1845 aa26.46■■□□□ 1.83
PKP3-205ENST00000527442 A0A1B0GUL6 1792 aa26.46■■□□□ 1.83
PKP3-205ENST00000527442 PI4KAP2A4QPH2 592 aa26.45■■□□□ 1.82
PKP3-205ENST00000527442 CWF19L2Q2TBE0 894 aaKnown RBP26.45■■□□□ 1.82
PKP3-205ENST00000527442 PI4KAP1Q8N8J0 262 aa26.45■■□□□ 1.82
PKP3-205ENST00000527442 COA1Q9GZY4 146 aa26.45■■□□□ 1.82
PKP3-205ENST00000527442 LAMB1P07942 1786 aa26.45■■□□□ 1.82
PKP3-205ENST00000527442 KLRK1P26718 216 aa26.44■■□□□ 1.82
PKP3-205ENST00000527442 PTPN12Q05209 780 aaKnown RBP26.44■■□□□ 1.82
PKP3-205ENST00000527442 PRKG1Q13976 671 aa26.44■■□□□ 1.82
PKP3-205ENST00000527442 NOM1Q5C9Z4 860 aaKnown RBP26.44■■□□□ 1.82
PKP3-205ENST00000527442 R3HDMLQ9H3Y0 253 aa26.43■■□□□ 1.82
PKP3-205ENST00000527442 SLC4A2P04920 1241 aa26.42■■□□□ 1.82
PKP3-205ENST00000527442 SREBF2Q12772 1141 aa26.42■■□□□ 1.82
PKP3-205ENST00000527442 FBXO46Q6PJ61 603 aaPredicted RBP26.42■■□□□ 1.82
PKP3-205ENST00000527442 UBE3BQ7Z3V4 1068 aa26.42■■□□□ 1.82
PKP3-205ENST00000527442 KIAA0825Q8IV33 1275 aa26.42■■□□□ 1.82
PKP3-205ENST00000527442 PTPRCP08575 1304 aa26.41■■□□□ 1.82
PKP3-205ENST00000527442 NEURL1BA8MQ27 555 aa26.41■■□□□ 1.82
PKP3-205ENST00000527442 NEXNQ0ZGT2 675 aa26.41■■□□□ 1.82
PKP3-205ENST00000527442 ARMC9Q7Z3E5 817 aa26.41■■□□□ 1.82
PKP3-205ENST00000527442 APOBEC3FQ8IUX4 373 aaKnown RBP26.41■■□□□ 1.82
PKP3-205ENST00000527442 ARHGAP45Q92619 1136 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms