RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 HSP90B1P14625 803 aaKnown RBP21.2■□□□□ 0.98
CHMP4A-203ENST00000527154 HYPKQ9NX55 129 aa21.2■□□□□ 0.98
CHMP4A-203ENST00000527154 MYO3BQ8WXR4 1341 aa21.2■□□□□ 0.98
CHMP4A-203ENST00000527154 COL1A1P02452 1464 aaPredicted RBP21.2■□□□□ 0.98
CHMP4A-203ENST00000527154 MANSC4A6NHS7 340 aaPredicted RBP21.19■□□□□ 0.98
CHMP4A-203ENST00000527154 CCDC152Q4G0S7 254 aa21.19■□□□□ 0.98
CHMP4A-203ENST00000527154 STRIP1Q5VSL9 837 aa21.19■□□□□ 0.98
CHMP4A-203ENST00000527154 IFNL1Q8IU54 200 aa21.19■□□□□ 0.98
CHMP4A-203ENST00000527154 TRIM17Q9Y577 477 aa21.19■□□□□ 0.98
CHMP4A-203ENST00000527154 PDE8AO60658 829 aa21.18■□□□□ 0.98
CHMP4A-203ENST00000527154 PCCAP05165 728 aaPredicted RBP21.18■□□□□ 0.98
CHMP4A-203ENST00000527154 ZBTB48P10074 688 aaPredicted RBP21.18■□□□□ 0.98
CHMP4A-203ENST00000527154 MKRN3Q13064 507 aaKnown RBP21.18■□□□□ 0.98
CHMP4A-203ENST00000527154 ARMC9Q7Z3E5 817 aa21.18■□□□□ 0.98
CHMP4A-203ENST00000527154 PTPN22Q9Y2R2 807 aa21.18■□□□□ 0.98
CHMP4A-203ENST00000527154 WTIPA6NIX2 430 aaPredicted RBP21.17■□□□□ 0.98
CHMP4A-203ENST00000527154 UNCXA6NJT0 531 aa21.17■□□□□ 0.98
CHMP4A-203ENST00000527154 TTLL12Q14166 644 aaPredicted RBP21.17■□□□□ 0.98
CHMP4A-203ENST00000527154 IGF2BP3O00425 579 aaKnown RBP eCLIP21.16■□□□□ 0.98
CHMP4A-203ENST00000527154 APOBEC3FQ8IUX4 373 aaKnown RBP21.16■□□□□ 0.98
CHMP4A-203ENST00000527154 OGFOD1Q8N543 542 aa21.16■□□□□ 0.98
CHMP4A-203ENST00000527154 CCDC191Q8NCU4 936 aa21.16■□□□□ 0.98
CHMP4A-203ENST00000527154 TRIM35Q9UPQ4 493 aa21.16■□□□□ 0.98
CHMP4A-203ENST00000527154 SSC5DA1L4H1 1573 aa21.15■□□□□ 0.98
CHMP4A-203ENST00000527154 ANKRD18AQ8IVF6 992 aa21.15■□□□□ 0.98
CHMP4A-203ENST00000527154 MXD3Q9BW11 206 aa21.15■□□□□ 0.98
CHMP4A-203ENST00000527154 CAP1Q01518 475 aa21.14■□□□□ 0.97
CHMP4A-203ENST00000527154 COA1Q9GZY4 146 aa21.14■□□□□ 0.97
CHMP4A-203ENST00000527154 MINPP1Q9UNW1 487 aa21.14■□□□□ 0.97
CHMP4A-203ENST00000527154 EN2P19622 333 aaPredicted RBP21.13■□□□□ 0.97
CHMP4A-203ENST00000527154 ERO1AQ96HE7 468 aa21.13■□□□□ 0.97
CHMP4A-203ENST00000527154 BSDC1Q9NW68 430 aaPredicted RBP21.13■□□□□ 0.97
CHMP4A-203ENST00000527154 ANGEL1Q9UNK9 670 aaKnown RBP21.13■□□□□ 0.97
CHMP4A-203ENST00000527154 TESPA1A2RU30 521 aaPredicted RBP21.12■□□□□ 0.97
CHMP4A-203ENST00000527154 SASH1O94885 1247 aa21.12■□□□□ 0.97
CHMP4A-203ENST00000527154 WNK4Q96J92 1243 aa21.12■□□□□ 0.97
CHMP4A-203ENST00000527154 TXNRD3Q86VQ6 643 aa21.11■□□□□ 0.97
CHMP4A-203ENST00000527154 MTMR14Q8NCE2 650 aa21.11■□□□□ 0.97
CHMP4A-203ENST00000527154 ZNF333Q96JL9 665 aa21.11■□□□□ 0.97
CHMP4A-203ENST00000527154 COLQQ9Y215 455 aaPredicted RBP21.11■□□□□ 0.97
CHMP4A-203ENST00000527154 RANBP2P49792 3224 aaKnown RBP21.1■□□□□ 0.97
CHMP4A-203ENST00000527154 CCT4P50991 539 aaKnown RBP21.1■□□□□ 0.97
CHMP4A-203ENST00000527154 DUSP27Q5VZP5 1158 aa21.1■□□□□ 0.97
CHMP4A-203ENST00000527154 RIC3Q7Z5B4 369 aa21.1■□□□□ 0.97
CHMP4A-203ENST00000527154 CDC5LQ99459 802 aaKnown RBP21.1■□□□□ 0.97
CHMP4A-203ENST00000527154 PPP2R3BQ9Y5P8 575 aa21.1■□□□□ 0.97
CHMP4A-203ENST00000527154 TTLL11Q8NHH1 800 aa21.09■□□□□ 0.97
CHMP4A-203ENST00000527154 CD99L2Q8TCZ2 262 aa21.09■□□□□ 0.97
CHMP4A-203ENST00000527154 SLC10A4Q96EP9 437 aa21.09■□□□□ 0.97
CHMP4A-203ENST00000527154 DEFB129Q9H1M3 183 aa21.09■□□□□ 0.97
CHMP4A-203ENST00000527154 PHAXQ9H814 394 aaKnown RBP21.09■□□□□ 0.97
CHMP4A-203ENST00000527154 CWC25Q9NXE8 425 aaPredicted RBP21.09■□□□□ 0.97
CHMP4A-203ENST00000527154 FZD1Q9UP38 647 aa21.09■□□□□ 0.97
CHMP4A-203ENST00000527154 TRIOBPQ9H2D6 2365 aa21.09■□□□□ 0.97
CHMP4A-203ENST00000527154 GJA5P36382 358 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 CTSWP56202 376 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 GOLGA2Q08379 1002 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 CRHR2Q13324 411 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 PRKG1Q13976 671 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 OTUD5Q96G74 571 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 CLMNQ96JQ2 1002 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 CCDC85AQ96PX6 553 aaPredicted RBP21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 MYD88Q99836 296 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 PTPN18Q99952 460 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 METTL22Q9BUU2 404 aaPredicted RBP21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 EFCC1Q9HA90 598 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 LEMD3Q9Y2U8 911 aa21.08■□□□□ 0.97
CHMP4A-203ENST00000527154 ZNF853P0CG23 659 aa21.07■□□□□ 0.96
CHMP4A-203ENST00000527154 TTLL5Q6EMB2 1281 aa21.07■□□□□ 0.96
CHMP4A-203ENST00000527154 CEP290O15078 2479 aa21.06■□□□□ 0.96
CHMP4A-203ENST00000527154 ZNF804BA4D1E1 1349 aa21.06■□□□□ 0.96
CHMP4A-203ENST00000527154 SP3Q02447 781 aa21.06■□□□□ 0.96
CHMP4A-203ENST00000527154 IRS2Q9Y4H2 1338 aa21.05■□□□□ 0.96
CHMP4A-203ENST00000527154 KIAA0825Q8IV33 1275 aa21.05■□□□□ 0.96
CHMP4A-203ENST00000527154 GREM2Q9H772 168 aa21.05■□□□□ 0.96
CHMP4A-203ENST00000527154 PPP1R12BO60237 982 aaPredicted RBP21.04■□□□□ 0.96
CHMP4A-203ENST00000527154 JARID2Q92833 1246 aaPredicted RBP21.04■□□□□ 0.96
CHMP4A-203ENST00000527154 MBIPQ9NS73 344 aa21.04■□□□□ 0.96
CHMP4A-203ENST00000527154 KLRK1P26718 216 aa21.03■□□□□ 0.96
CHMP4A-203ENST00000527154 OTUD7BQ6GQQ9 843 aa21.03■□□□□ 0.96
CHMP4A-203ENST00000527154 CERS5Q8N5B7 392 aa21.03■□□□□ 0.96
CHMP4A-203ENST00000527154 LAS1LQ9Y4W2 734 aaKnown RBP21.03■□□□□ 0.96
CHMP4A-203ENST00000527154 ECM29Q5VYK3 1845 aa21.02■□□□□ 0.96
CHMP4A-203ENST00000527154 IGKV5-2P06315 115 aa21.02■□□□□ 0.96
CHMP4A-203ENST00000527154 RUNDC1Q96C34 613 aa21.02■□□□□ 0.96
CHMP4A-203ENST00000527154 MS4A4AQ96JQ5 239 aa21.02■□□□□ 0.96
CHMP4A-203ENST00000527154 USP2O75604 605 aaPredicted RBP21.01■□□□□ 0.95
CHMP4A-203ENST00000527154 GTF2IP78347 998 aa21.01■□□□□ 0.95
CHMP4A-203ENST00000527154 NEUROD2Q15784 382 aa21.01■□□□□ 0.95
CHMP4A-203ENST00000527154 SUPT20HL1Q3ZLR7 823 aa21.01■□□□□ 0.95
CHMP4A-203ENST00000527154 C15orf52Q6ZUT6 534 aaKnown RBP21.01■□□□□ 0.95
CHMP4A-203ENST00000527154 TMEM106CQ9BVX2 250 aa21.01■□□□□ 0.95
CHMP4A-203ENST00000527154 MYH3P11055 1940 aa21.01■□□□□ 0.95
CHMP4A-203ENST00000527154 FKBP1AP62942 108 aaKnown RBP21■□□□□ 0.95
CHMP4A-203ENST00000527154 DLGAP5Q15398 846 aa21■□□□□ 0.95
CHMP4A-203ENST00000527154 SPDYE2BA6NHP3 402 aa20.99■□□□□ 0.95
CHMP4A-203ENST00000527154 H0YGN5 161 aa20.99■□□□□ 0.95
CHMP4A-203ENST00000527154 SPDYE6P0CI01 402 aa20.99■□□□□ 0.95
CHMP4A-203ENST00000527154 NBPF12Q5TAG4 269 aaPredicted RBP20.99■□□□□ 0.95
CHMP4A-203ENST00000527154 ANKRD13AQ8IZ07 590 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms