RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 OGFOD1Q8N543 542 aa16.84■□□□□ 0.29
CLNS1A-207ENST00000527133 MBIPQ9NS73 344 aa16.84■□□□□ 0.29
CLNS1A-207ENST00000527133 WNT10BO00744 389 aa16.83■□□□□ 0.28
CLNS1A-207ENST00000527133 FKTNO75072 461 aa16.83■□□□□ 0.28
CLNS1A-207ENST00000527133 SASH1O94885 1247 aa16.83■□□□□ 0.28
CLNS1A-207ENST00000527133 PRKG1Q13976 671 aa16.83■□□□□ 0.28
CLNS1A-207ENST00000527133 R3HDMLQ9H3Y0 253 aa16.83■□□□□ 0.28
CLNS1A-207ENST00000527133 MED23Q9ULK4 1368 aa16.83■□□□□ 0.28
CLNS1A-207ENST00000527133 ELL2O00472 640 aaPredicted RBP16.82■□□□□ 0.28
CLNS1A-207ENST00000527133 PTPN12Q05209 780 aaKnown RBP16.82■□□□□ 0.28
CLNS1A-207ENST00000527133 WDR43Q15061 677 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLNS1A-207ENST00000527133 CDC5LQ99459 802 aaKnown RBP16.82■□□□□ 0.28
CLNS1A-207ENST00000527133 BRCA2P51587 3418 aa16.82■□□□□ 0.28
CLNS1A-207ENST00000527133 CTSWP56202 376 aa16.81■□□□□ 0.28
CLNS1A-207ENST00000527133 ARMC9Q7Z3E5 817 aa16.81■□□□□ 0.28
CLNS1A-207ENST00000527133 MINPP1Q9UNW1 487 aa16.81■□□□□ 0.28
CLNS1A-207ENST00000527133 MYO3BQ8WXR4 1341 aa16.8■□□□□ 0.28
CLNS1A-207ENST00000527133 STRIP1Q5VSL9 837 aa16.8■□□□□ 0.28
CLNS1A-207ENST00000527133 METTL22Q9BUU2 404 aaPredicted RBP16.8■□□□□ 0.28
CLNS1A-207ENST00000527133 CFHR5Q9BXR6 569 aa16.8■□□□□ 0.28
CLNS1A-207ENST00000527133 MYBBP1AQ9BQG0 1328 aaKnown RBP16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 CCT4P50991 539 aaKnown RBP16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 SPRYD7Q5W111 196 aa16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 APOBEC3FQ8IUX4 373 aaKnown RBP16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 GCC1Q96CN9 775 aa16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 COA1Q9GZY4 146 aa16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 GREM2Q9H772 168 aa16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 ZNF646O15015 1829 aaPredicted RBP16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 SPEF2Q9C093 1822 aa16.79■□□□□ 0.28
CLNS1A-207ENST00000527133 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
CLNS1A-207ENST00000527133 ZNF853P0CG23 659 aa16.78■□□□□ 0.28
CLNS1A-207ENST00000527133 LDLRAD1Q5T700 205 aa16.78■□□□□ 0.28
CLNS1A-207ENST00000527133 TXNRD3Q86VQ6 643 aa16.78■□□□□ 0.28
CLNS1A-207ENST00000527133 TTLL11Q8NHH1 800 aa16.78■□□□□ 0.28
CLNS1A-207ENST00000527133 ANGEL1Q9UNK9 670 aaKnown RBP16.78■□□□□ 0.28
CLNS1A-207ENST00000527133 FZD1Q9UP38 647 aa16.78■□□□□ 0.28
CLNS1A-207ENST00000527133 ADAMTS8Q9UP79 889 aa16.78■□□□□ 0.28
CLNS1A-207ENST00000527133 MAP3K2Q9Y2U5 619 aa16.78■□□□□ 0.28
CLNS1A-207ENST00000527133 ALDH1A1P00352 501 aa16.77■□□□□ 0.28
CLNS1A-207ENST00000527133 KIAA0825Q8IV33 1275 aa16.77■□□□□ 0.28
CLNS1A-207ENST00000527133 TRIM17Q9Y577 477 aa16.77■□□□□ 0.28
CLNS1A-207ENST00000527133 TTLL5Q6EMB2 1281 aa16.76■□□□□ 0.27
CLNS1A-207ENST00000527133 C8orf58Q8NAV2 365 aa16.76■□□□□ 0.27
CLNS1A-207ENST00000527133 IFT57Q9NWB7 429 aa16.76■□□□□ 0.27
CLNS1A-207ENST00000527133 POTEFA5A3E0 1075 aa16.75■□□□□ 0.27
CLNS1A-207ENST00000527133 MANSC4A6NHS7 340 aaPredicted RBP16.75■□□□□ 0.27
CLNS1A-207ENST00000527133 IGKV5-2P06315 115 aa16.75■□□□□ 0.27
CLNS1A-207ENST00000527133 KLRK1P26718 216 aa16.75■□□□□ 0.27
CLNS1A-207ENST00000527133 MMP14P50281 582 aa16.75■□□□□ 0.27
CLNS1A-207ENST00000527133 GNAI1P63096 354 aa16.75■□□□□ 0.27
CLNS1A-207ENST00000527133 OTOP1Q7RTM1 612 aa16.75■□□□□ 0.27
CLNS1A-207ENST00000527133 IFNL1Q8IU54 200 aa16.75■□□□□ 0.27
CLNS1A-207ENST00000527133 SLC10A4Q96EP9 437 aa16.75■□□□□ 0.27
CLNS1A-207ENST00000527133 LEMD3Q9Y2U8 911 aa16.75■□□□□ 0.27
CLNS1A-207ENST00000527133 IGHMBP2P38935 993 aaKnown RBP16.74■□□□□ 0.27
CLNS1A-207ENST00000527133 GTF2IP78347 998 aa16.74■□□□□ 0.27
CLNS1A-207ENST00000527133 HABP4Q5JVS0 413 aaKnown RBP16.74■□□□□ 0.27
CLNS1A-207ENST00000527133 CCDC30Q5VVM6 783 aa16.74■□□□□ 0.27
CLNS1A-207ENST00000527133 ZBED3Q96IU2 234 aaPredicted RBP16.74■□□□□ 0.27
CLNS1A-207ENST00000527133 DEFB129Q9H1M3 183 aa16.74■□□□□ 0.27
CLNS1A-207ENST00000527133 MYH3P11055 1940 aa16.74■□□□□ 0.27
CLNS1A-207ENST00000527133 ZNF804BA4D1E1 1349 aa16.73■□□□□ 0.27
CLNS1A-207ENST00000527133 PI4KAP2A4QPH2 592 aa16.73■□□□□ 0.27
CLNS1A-207ENST00000527133 INHBEP58166 350 aa16.73■□□□□ 0.27
CLNS1A-207ENST00000527133 CWF19L2Q2TBE0 894 aaKnown RBP16.73■□□□□ 0.27
CLNS1A-207ENST00000527133 INTS3Q68E01 1043 aaKnown RBP16.73■□□□□ 0.27
CLNS1A-207ENST00000527133 KSR2Q6VAB6 950 aa16.73■□□□□ 0.27
CLNS1A-207ENST00000527133 PI4KAP1Q8N8J0 262 aa16.73■□□□□ 0.27
CLNS1A-207ENST00000527133 CLMNQ96JQ2 1002 aa16.73■□□□□ 0.27
CLNS1A-207ENST00000527133 COL1A1P02452 1464 aaPredicted RBP16.73■□□□□ 0.27
CLNS1A-207ENST00000527133 IGF2BP3O00425 579 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLNS1A-207ENST00000527133 CALD1Q05682 793 aaKnown RBP16.72■□□□□ 0.27
CLNS1A-207ENST00000527133 NEXNQ0ZGT2 675 aa16.72■□□□□ 0.27
CLNS1A-207ENST00000527133 DLGAP5Q15398 846 aa16.72■□□□□ 0.27
CLNS1A-207ENST00000527133 UBE3BQ7Z3V4 1068 aa16.72■□□□□ 0.27
CLNS1A-207ENST00000527133 WNK4Q96J92 1243 aa16.72■□□□□ 0.27
CLNS1A-207ENST00000527133 APAF1O14727 1248 aa16.71■□□□□ 0.27
CLNS1A-207ENST00000527133 PPP1R12BO60237 982 aaPredicted RBP16.71■□□□□ 0.27
CLNS1A-207ENST00000527133 ZBTB48P10074 688 aaPredicted RBP16.71■□□□□ 0.27
CLNS1A-207ENST00000527133 KCNJ4P48050 445 aa16.71■□□□□ 0.27
CLNS1A-207ENST00000527133 ANKRD2Q9GZV1 360 aa16.71■□□□□ 0.27
CLNS1A-207ENST00000527133 SSC5DA1L4H1 1573 aa16.71■□□□□ 0.27
CLNS1A-207ENST00000527133 NEURL1BA8MQ27 555 aa16.7■□□□□ 0.26
CLNS1A-207ENST00000527133 ITGA6P23229 1130 aa16.7■□□□□ 0.26
CLNS1A-207ENST00000527133 MAP3K11Q16584 847 aa16.7■□□□□ 0.26
CLNS1A-207ENST00000527133 TSPYL6Q8N831 410 aa16.7■□□□□ 0.26
CLNS1A-207ENST00000527133 CD99L2Q8TCZ2 262 aa16.7■□□□□ 0.26
CLNS1A-207ENST00000527133 ERO1AQ96HE7 468 aa16.7■□□□□ 0.26
CLNS1A-207ENST00000527133 MPHOSPH8Q99549 860 aa16.7■□□□□ 0.26
CLNS1A-207ENST00000527133 CHMP4AQ9BY43 222 aa16.7■□□□□ 0.26
CLNS1A-207ENST00000527133 PCDHAC2Q9Y5I4 1007 aa16.7■□□□□ 0.26
CLNS1A-207ENST00000527133 KIAA0100Q14667 2235 aaKnown RBP16.7■□□□□ 0.26
CLNS1A-207ENST00000527133 CLRN2A0PK11 232 aa16.69■□□□□ 0.26
CLNS1A-207ENST00000527133 DDX10Q13206 875 aaKnown RBP16.69■□□□□ 0.26
CLNS1A-207ENST00000527133 CRHR2Q13324 411 aa16.69■□□□□ 0.26
CLNS1A-207ENST00000527133 CERS5Q8N5B7 392 aa16.69■□□□□ 0.26
CLNS1A-207ENST00000527133 CD209Q9NNX6 404 aa16.69■□□□□ 0.26
CLNS1A-207ENST00000527133 PTPN22Q9Y2R2 807 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms