RNA–Protein interactions for RNA: ENST00000527025.5

CCDC90B-208, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-208ENST00000527025 CDC5LQ99459 802 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-208ENST00000527025 PUS3Q9BZE2 481 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-208ENST00000527025 TMX4Q9H1E5 349 aaPredicted RBP11.2□□□□□ -0.62
CCDC90B-208ENST00000527025 TAF1DQ9H5J8 278 aaPredicted RBP11.2□□□□□ -0.62
CCDC90B-208ENST00000527025 BICC1Q9H694 974 aaKnown RBP11.2□□□□□ -0.62
CCDC90B-208ENST00000527025 ANKIB1Q9P2G1 1089 aa11.2□□□□□ -0.62
CCDC90B-208ENST00000527025 ZNF646O15015 1829 aaPredicted RBP11.2□□□□□ -0.62
CCDC90B-208ENST00000527025 ADAMTSL1Q8N6G6 1762 aa11.2□□□□□ -0.62
CCDC90B-208ENST00000527025 XDHP47989 1333 aa11.19□□□□□ -0.62
CCDC90B-208ENST00000527025 ANKRD18BA2A2Z9 1011 aa11.19□□□□□ -0.62
CCDC90B-208ENST00000527025 TAF5LO75529 589 aa11.19□□□□□ -0.62
CCDC90B-208ENST00000527025 TIE1P35590 1138 aa11.19□□□□□ -0.62
CCDC90B-208ENST00000527025 EIF6P56537 245 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-208ENST00000527025 KLHDC4Q8TBB5 520 aa11.19□□□□□ -0.62
CCDC90B-208ENST00000527025 RBM46Q8TBY0 533 aaKnown RBP11.19□□□□□ -0.62
CCDC90B-208ENST00000527025 ARHGAP45Q92619 1136 aa11.19□□□□□ -0.62
CCDC90B-208ENST00000527025 GGA1Q9UJY5 639 aa11.19□□□□□ -0.62
CCDC90B-208ENST00000527025 CHMP3Q9Y3E7 222 aa11.19□□□□□ -0.62
CCDC90B-208ENST00000527025 ECE2O60344 883 aa11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 IGHMBP2P38935 993 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 RFX5P48382 616 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 CCT4P50991 539 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 CHRNDQ07001 517 aa11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 IFIT5Q13325 482 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 INTS3Q68E01 1043 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 FRAT1Q92837 279 aaPredicted RBP11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 CLUAP1Q96AJ1 413 aa11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 MEIS3Q99687 375 aa11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 API5Q9BZZ5 524 aaKnown RBP11.18□□□□□ -0.62
CCDC90B-208ENST00000527025 PSMD14O00487 310 aa11.17□□□□□ -0.62
CCDC90B-208ENST00000527025 RLBP1P12271 317 aa11.17□□□□□ -0.62
CCDC90B-208ENST00000527025 ATP2B4P23634 1241 aa11.17□□□□□ -0.62
CCDC90B-208ENST00000527025 EPHX2P34913 555 aa11.17□□□□□ -0.62
CCDC90B-208ENST00000527025 GMPSP49915 693 aaPredicted RBP11.17□□□□□ -0.62
CCDC90B-208ENST00000527025 HTRA3P83110 453 aa11.17□□□□□ -0.62
CCDC90B-208ENST00000527025 ATF7IPQ6VMQ6 1270 aa11.17□□□□□ -0.62
CCDC90B-208ENST00000527025 ZC3H12CQ9C0D7 883 aaKnown RBP11.17□□□□□ -0.62
CCDC90B-208ENST00000527025 PSME4Q14997 1843 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 ZNF804BA4D1E1 1349 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 TTLL13PA6NNM8 815 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 EGFRP00533 1210 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 HSPA6P17066 643 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 NUBP1P53384 320 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 HIRAP54198 1017 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 CCDC57Q2TAC2 916 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 LRRC24Q50LG9 513 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 CIAPIN1Q6FI81 312 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 MAMSTRQ6ZN01 415 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 C16orf71Q8IYS4 520 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 MPHOSPH8Q99549 860 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 MXD3Q9BW11 206 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 GPRC5DQ9NZD1 345 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 HACL1Q9UJ83 578 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 COLQQ9Y215 455 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 RIPOR2Q9Y4F9 1068 aa11.16□□□□□ -0.62
CCDC90B-208ENST00000527025 KIF16BQ96L93 1317 aa11.15□□□□□ -0.62
CCDC90B-208ENST00000527025 ITGBL1O95965 494 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-208ENST00000527025 FMR1Q06787 632 aaKnown RBP eCLIP11.15□□□□□ -0.62
CCDC90B-208ENST00000527025 FSTL1Q12841 308 aa11.15□□□□□ -0.62
CCDC90B-208ENST00000527025 LDHAL6AQ6ZMR3 332 aa11.15□□□□□ -0.62
CCDC90B-208ENST00000527025 TMEM57Q8N5G2 664 aa11.15□□□□□ -0.62
CCDC90B-208ENST00000527025 EYA3Q99504 573 aa11.15□□□□□ -0.62
CCDC90B-208ENST00000527025 LEMD3Q9Y2U8 911 aa11.15□□□□□ -0.62
CCDC90B-208ENST00000527025 LRRFIP2Q9Y608 721 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-208ENST00000527025 MED23Q9ULK4 1368 aa11.15□□□□□ -0.63
CCDC90B-208ENST00000527025 IQCA1LA6NCM1 817 aa11.14□□□□□ -0.63
CCDC90B-208ENST00000527025 PLIN1O60240 522 aa11.14□□□□□ -0.63
CCDC90B-208ENST00000527025 VIL1P09327 827 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-208ENST00000527025 PTPN12Q05209 780 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-208ENST00000527025 EAPPQ56P03 285 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-208ENST00000527025 ZKSCAN2Q63HK3 967 aa11.14□□□□□ -0.63
CCDC90B-208ENST00000527025 VGLL2Q8N8G2 317 aa11.14□□□□□ -0.63
CCDC90B-208ENST00000527025 SMC1BQ8NDV3 1235 aa11.14□□□□□ -0.63
CCDC90B-208ENST00000527025 ANKRD2Q9GZV1 360 aa11.14□□□□□ -0.63
CCDC90B-208ENST00000527025 PCNTO95613 3336 aa11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 IPO8O15397 1037 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 UBTFL1P0CB47 393 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 TNIP1Q15025 636 aa11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 MAP1SQ66K74 1059 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 DLK2Q6UY11 383 aa11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 ATG9AQ7Z3C6 839 aa11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 SAMD7Q7Z3H4 446 aa11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 DNAJC5GQ8N7S2 189 aa11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 TRPM4Q8TD43 1214 aa11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 GMLQ99445 158 aa11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 CNNM1Q9NRU3 951 aa11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 CNOT7Q9UIV1 285 aaKnown RBP11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.13□□□□□ -0.63
CCDC90B-208ENST00000527025 PASKQ96RG2 1323 aa11.12□□□□□ -0.63
CCDC90B-208ENST00000527025 TAF7LQ5H9L4 462 aa11.12□□□□□ -0.63
CCDC90B-208ENST00000527025 DACT2Q5SW24 774 aa11.12□□□□□ -0.63
CCDC90B-208ENST00000527025 C15orf52Q6ZUT6 534 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-208ENST00000527025 PODNQ7Z5L7 613 aa11.12□□□□□ -0.63
CCDC90B-208ENST00000527025 LDHDQ86WU2 507 aa11.12□□□□□ -0.63
CCDC90B-208ENST00000527025 PANK1Q8TE04 598 aa11.12□□□□□ -0.63
CCDC90B-208ENST00000527025 PA2G4Q9UQ80 394 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-208ENST00000527025 POLR2AP24928 1970 aaKnown RBP11.12□□□□□ -0.63
CCDC90B-208ENST00000527025 ASTN2O75129 1339 aaPredicted RBP11.11□□□□□ -0.63
CCDC90B-208ENST00000527025 ZBTB7BO15156 539 aaPredicted RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms