RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 MPHOSPH8Q99549 860 aa11.56□□□□□ -0.56
USP35-201ENST00000526425 THRAP3Q9Y2W1 955 aaKnown RBP11.56□□□□□ -0.56
USP35-201ENST00000526425 A0A1B0GUL7 405 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 SYT1P21579 422 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 DNM1Q05193 864 aaKnown RBP11.55□□□□□ -0.56
USP35-201ENST00000526425 ZRSR1Q15695 479 aaKnown RBP11.55□□□□□ -0.56
USP35-201ENST00000526425 POLR3GO15318 223 aaPredicted RBP11.55□□□□□ -0.56
USP35-201ENST00000526425 MBD3O95983 291 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 HCLS1P14317 486 aaPredicted RBP11.55□□□□□ -0.56
USP35-201ENST00000526425 RUFY3Q7L099 469 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 KAZALD1Q96I82 304 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 LMBRD1Q9NUN5 540 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 SLC27A2O14975 620 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 PTPN12Q05209 780 aaKnown RBP11.55□□□□□ -0.56
USP35-201ENST00000526425 TTLL5Q6EMB2 1281 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 ATG3Q9NT62 314 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 PAG1Q9NWQ8 432 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 NSFL1CQ9UNZ2 370 aaKnown RBP11.55□□□□□ -0.56
USP35-201ENST00000526425 USP54Q70EL1 1684 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 RGPD2P0DJD1 1756 aa11.55□□□□□ -0.56
USP35-201ENST00000526425 SF3A1Q15459 793 aaKnown RBP11.54□□□□□ -0.56
USP35-201ENST00000526425 CT47A1Q5JQC4 288 aaPredicted RBP11.54□□□□□ -0.56
USP35-201ENST00000526425 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
USP35-201ENST00000526425 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP35-201ENST00000526425 IBSPP21815 317 aaPredicted RBP11.54□□□□□ -0.56
USP35-201ENST00000526425 NOLC1Q14978 699 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP35-201ENST00000526425 NFXL1Q6ZNB6 911 aa11.54□□□□□ -0.56
USP35-201ENST00000526425 VPS37DQ86XT2 251 aa11.54□□□□□ -0.56
USP35-201ENST00000526425 PIK3R5Q8WYR1 880 aa11.54□□□□□ -0.56
USP35-201ENST00000526425 NEK1Q96PY6 1258 aa11.54□□□□□ -0.56
USP35-201ENST00000526425 OGFRQ9NZT2 677 aa11.54□□□□□ -0.56
USP35-201ENST00000526425 MARF1Q9Y4F3 1742 aaKnown RBP11.54□□□□□ -0.56
USP35-201ENST00000526425 SPATA31A1Q5TZJ5 1347 aa11.54□□□□□ -0.56
USP35-201ENST00000526425 HNRNPH2P55795 449 aaKnown RBP11.54□□□□□ -0.56
USP35-201ENST00000526425 PI16Q6UXB8 463 aa11.54□□□□□ -0.56
USP35-201ENST00000526425 RASSF4Q9H2L5 321 aa11.54□□□□□ -0.56
USP35-201ENST00000526425 FEZ2Q9UHY8 353 aaPredicted RBP11.54□□□□□ -0.56
USP35-201ENST00000526425 PHF14O94880 888 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 TRDNQ13061 729 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 NAA30Q147X3 362 aaPredicted RBP11.53□□□□□ -0.56
USP35-201ENST00000526425 Q6ZUG5 572 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 SMARCC1Q92922 1105 aaPredicted RBP11.53□□□□□ -0.56
USP35-201ENST00000526425 TSPY26PQ9H489 355 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 ABCF2Q9UG63 623 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 PLEKHG2Q9H7P9 1386 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 JCADQ9P266 1359 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 ZSCAN22P10073 491 aaPredicted RBP11.53□□□□□ -0.56
USP35-201ENST00000526425 DZIP3Q86Y13 1208 aaKnown RBP11.53□□□□□ -0.56
USP35-201ENST00000526425 CCDC144CPQ8IYA2 1237 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 AOX1Q06278 1338 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 RIOK3O14730 519 aaKnown RBP11.53□□□□□ -0.56
USP35-201ENST00000526425 MCMDC2Q4G0Z9 681 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 CCDC82Q8N4S0 544 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 CERKQ8TCT0 537 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 TSPYL1Q9H0U9 437 aa11.53□□□□□ -0.56
USP35-201ENST00000526425 SNAP23O00161 211 aa11.52□□□□□ -0.56
USP35-201ENST00000526425 ADORA1P30542 326 aa11.52□□□□□ -0.56
USP35-201ENST00000526425 IL15P40933 162 aaPredicted RBP11.52□□□□□ -0.56
USP35-201ENST00000526425 ME3Q16798 604 aa11.52□□□□□ -0.56
USP35-201ENST00000526425 CCDC191Q8NCU4 936 aa11.52□□□□□ -0.56
USP35-201ENST00000526425 ZSCAN31Q96LW9 406 aaPredicted RBP11.52□□□□□ -0.56
USP35-201ENST00000526425 ST7Q9NRC1 585 aa11.52□□□□□ -0.56
USP35-201ENST00000526425 TMEM63CQ9P1W3 806 aa11.52□□□□□ -0.56
USP35-201ENST00000526425 MTMR7Q9Y216 660 aa11.52□□□□□ -0.56
USP35-201ENST00000526425 ZDHHC9Q9Y397 364 aa11.52□□□□□ -0.56
USP35-201ENST00000526425 TAF6LQ9Y6J9 622 aa11.52□□□□□ -0.56
USP35-201ENST00000526425 PHRF1Q9P1Y6 1649 aaKnown RBP11.52□□□□□ -0.56
USP35-201ENST00000526425 EYA2O00167 538 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 ATP2B1P20020 1258 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 FAM182BQ5T319 152 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 GIMAP6Q6P9H5 292 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 CKAP2LQ8IYA6 745 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 SPC24Q8NBT2 197 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 GPT2Q8TD30 523 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 ZBTB1Q9Y2K1 713 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 ANKRD18BA2A2Z9 1011 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 IRS4O14654 1257 aaPredicted RBP11.52□□□□□ -0.57
USP35-201ENST00000526425 TRIM66O15016 1216 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 APOBRQ0VD83 1088 aa11.52□□□□□ -0.57
USP35-201ENST00000526425 PRPF38AQ8NAV1 312 aaKnown RBP11.52□□□□□ -0.57
USP35-201ENST00000526425 NCOA5Q9HCD5 579 aaKnown RBP11.52□□□□□ -0.57
USP35-201ENST00000526425 RGPD5Q99666 1765 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 JAK2O60674 1132 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 DEF6Q9H4E7 631 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 GEMIN8Q9NWZ8 242 aaKnown RBP11.51□□□□□ -0.57
USP35-201ENST00000526425 PXDNLA1KZ92 1463 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 TAF5LO75529 589 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 KRT85P78386 507 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 SMIM5Q71RC9 77 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.51□□□□□ -0.57
USP35-201ENST00000526425 TPCN1Q9ULQ1 816 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 ABCC6O95255 1503 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 LOC102724428A0A0B4J2F2 783 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 SIK1P57059 783 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 ANKRD1Q15327 319 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 SLC4A8Q2Y0W8 1093 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 LRRFIP1Q32MZ4 808 aaKnown RBP11.51□□□□□ -0.57
USP35-201ENST00000526425 VPS53Q5VIR6 699 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 SPATA32Q96LK8 384 aa11.51□□□□□ -0.57
USP35-201ENST00000526425 PRIMPOLQ96LW4 560 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms