RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 HELLSQ9NRZ9 838 aa12.85□□□□□ -0.35
SPIDR-222ENST00000524006 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.85□□□□□ -0.35
SPIDR-222ENST00000524006 LY75O60449 1722 aa12.85□□□□□ -0.35
SPIDR-222ENST00000524006 SLC27A2O14975 620 aa12.84□□□□□ -0.35
SPIDR-222ENST00000524006 ZFYP08048 801 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-222ENST00000524006 ITGA6P23229 1130 aa12.84□□□□□ -0.35
SPIDR-222ENST00000524006 KCNQ4P56696 695 aa12.84□□□□□ -0.35
SPIDR-222ENST00000524006 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
SPIDR-222ENST00000524006 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
SPIDR-222ENST00000524006 LDHAL6AQ6ZMR3 332 aa12.84□□□□□ -0.35
SPIDR-222ENST00000524006 RUFY3Q7L099 469 aa12.84□□□□□ -0.35
SPIDR-222ENST00000524006 MAP4K1Q92918 833 aa12.84□□□□□ -0.35
SPIDR-222ENST00000524006 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
SPIDR-222ENST00000524006 SNRKQ9NRH2 765 aa12.84□□□□□ -0.35
SPIDR-222ENST00000524006 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
SPIDR-222ENST00000524006 DDX49Q9Y6V7 483 aaKnown RBP12.84□□□□□ -0.35
SPIDR-222ENST00000524006 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
SPIDR-222ENST00000524006 RPAP1Q9BWH6 1393 aaPredicted RBP12.83□□□□□ -0.36
SPIDR-222ENST00000524006 TIMM10P62072 90 aa12.83□□□□□ -0.36
SPIDR-222ENST00000524006 FKBP4Q02790 459 aaKnown RBP eCLIP12.83□□□□□ -0.36
SPIDR-222ENST00000524006 ZSCAN25Q6NSZ9 544 aa12.83□□□□□ -0.36
SPIDR-222ENST00000524006 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
SPIDR-222ENST00000524006 RASEFQ8IZ41 740 aa12.83□□□□□ -0.36
SPIDR-222ENST00000524006 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
SPIDR-222ENST00000524006 ATP6V1DQ9Y5K8 247 aa12.83□□□□□ -0.36
SPIDR-222ENST00000524006 PNPLA7Q6ZV29 1317 aa12.83□□□□□ -0.36
SPIDR-222ENST00000524006 CCDC88AQ3V6T2 1871 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 C4AP0C0L4 1744 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 C4BP0C0L5 1744 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 RNF113AO15541 343 aaKnown RBP12.82□□□□□ -0.36
SPIDR-222ENST00000524006 CSF1RP07333 972 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 SLC5A1P13866 664 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 NECTIN1Q15223 517 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 TTF1Q15361 905 aaPredicted RBP12.82□□□□□ -0.36
SPIDR-222ENST00000524006 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 CCDC152Q4G0S7 254 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 FOXD4L5Q5VV16 416 aaPredicted RBP12.82□□□□□ -0.36
SPIDR-222ENST00000524006 FOXD4L4Q8WXT5 416 aaPredicted RBP12.82□□□□□ -0.36
SPIDR-222ENST00000524006 KCNB2Q92953 911 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 XAGE2Q96GT9 111 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 TTC14Q96N46 770 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 SLC4A9Q96Q91 983 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 MPHOSPH8Q99549 860 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 PUS3Q9BZE2 481 aaKnown RBP12.82□□□□□ -0.36
SPIDR-222ENST00000524006 GREM2Q9H772 168 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 MROH5Q6ZUA9 1318 aa12.82□□□□□ -0.36
SPIDR-222ENST00000524006 FAM177BA6PVY3 158 aa12.81□□□□□ -0.36
SPIDR-222ENST00000524006 MBD3O95983 291 aa12.81□□□□□ -0.36
SPIDR-222ENST00000524006 CYP2E1P05181 493 aaPredicted RBP12.81□□□□□ -0.36
SPIDR-222ENST00000524006 HMGB1P09429 215 aaKnown RBP12.81□□□□□ -0.36
SPIDR-222ENST00000524006 UQCRFS1P1P0C7P4 283 aa12.81□□□□□ -0.36
SPIDR-222ENST00000524006 PDIA4P13667 645 aaKnown RBP12.81□□□□□ -0.36
SPIDR-222ENST00000524006 IGHMBP2P38935 993 aaKnown RBP12.81□□□□□ -0.36
SPIDR-222ENST00000524006 EIF5P55010 431 aaKnown RBP12.81□□□□□ -0.36
SPIDR-222ENST00000524006 CSPP1Q1MSJ5 1256 aa12.81□□□□□ -0.36
SPIDR-222ENST00000524006 ZNF34Q8IZ26 560 aa12.81□□□□□ -0.36
SPIDR-222ENST00000524006 TTLL11Q8NHH1 800 aa12.81□□□□□ -0.36
SPIDR-222ENST00000524006 SLC16A10Q8TF71 515 aa12.81□□□□□ -0.36
SPIDR-222ENST00000524006 SYAP1Q96A49 352 aaPredicted RBP12.81□□□□□ -0.36
SPIDR-222ENST00000524006 NIP7Q9Y221 180 aaKnown RBP eCLIP12.81□□□□□ -0.36
SPIDR-222ENST00000524006 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
SPIDR-222ENST00000524006 MAST2Q6P0Q8 1798 aa12.8□□□□□ -0.36
SPIDR-222ENST00000524006 TAF5LO75529 589 aa12.8□□□□□ -0.36
SPIDR-222ENST00000524006 RPS6KB1P23443 525 aa12.8□□□□□ -0.36
SPIDR-222ENST00000524006 PUM3Q15397 648 aaKnown RBP12.8□□□□□ -0.36
SPIDR-222ENST00000524006 ZNF589Q86UQ0 364 aaPredicted RBP12.8□□□□□ -0.36
SPIDR-222ENST00000524006 CCDC83Q8IWF9 413 aa12.8□□□□□ -0.36
SPIDR-222ENST00000524006 CHMP4CQ96CF2 233 aa12.8□□□□□ -0.36
SPIDR-222ENST00000524006 DSCC1Q9BVC3 393 aa12.8□□□□□ -0.36
SPIDR-222ENST00000524006 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
SPIDR-222ENST00000524006 CTNNA3Q9UI47 895 aa12.8□□□□□ -0.36
SPIDR-222ENST00000524006 UBN2Q6ZU65 1347 aa12.8□□□□□ -0.36
SPIDR-222ENST00000524006 CPA1P15085 419 aa12.79□□□□□ -0.36
SPIDR-222ENST00000524006 PDCP20941 246 aa12.79□□□□□ -0.36
SPIDR-222ENST00000524006 GTF2E1P29083 439 aaPredicted RBP12.79□□□□□ -0.36
SPIDR-222ENST00000524006 ADORA1P30542 326 aa12.79□□□□□ -0.36
SPIDR-222ENST00000524006 KLHL40Q2TBA0 621 aa12.79□□□□□ -0.36
SPIDR-222ENST00000524006 ZMYM1Q5SVZ6 1142 aa12.79□□□□□ -0.36
SPIDR-222ENST00000524006 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
SPIDR-222ENST00000524006 CCDC129Q6ZRS4 1044 aa12.79□□□□□ -0.36
SPIDR-222ENST00000524006 NEK1Q96PY6 1258 aa12.79□□□□□ -0.36
SPIDR-222ENST00000524006 CDC5LQ99459 802 aaKnown RBP12.79□□□□□ -0.36
SPIDR-222ENST00000524006 TAF1P21675 1872 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 BRD1O95696 1058 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 POLD1P28340 1107 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 ITPK1Q13572 414 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 PKP1Q13835 747 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 GPR162Q16538 588 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 ADCK5Q3MIX3 580 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 NLGN2Q8NFZ4 835 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 ANP32BQ92688 251 aaKnown RBP12.78□□□□□ -0.36
SPIDR-222ENST00000524006 KIF3AQ9Y496 699 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 QSER1Q2KHR3 1735 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 MAST3O60307 1309 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 CNTNAP4Q9C0A0 1308 aa12.78□□□□□ -0.36
SPIDR-222ENST00000524006 VPS37CA5D8V6 355 aaPredicted RBP12.77□□□□□ -0.37
SPIDR-222ENST00000524006 NPHP1O15259 732 aa12.77□□□□□ -0.37
SPIDR-222ENST00000524006 CAMTA2O94983 1202 aa12.77□□□□□ -0.37
SPIDR-222ENST00000524006 GJB2P29033 226 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms