RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 AGBL3Q8NEM8 1001 aa23.64■■□□□ 1.37
SPIDR-220ENST00000522900 UTYO14607 1347 aa23.63■■□□□ 1.37
SPIDR-220ENST00000522900 PCNTO95613 3336 aa23.63■■□□□ 1.37
SPIDR-220ENST00000522900 CELF2O95319 508 aaKnown RBP23.63■■□□□ 1.37
SPIDR-220ENST00000522900 ZNF280AP59817 542 aaPredicted RBP23.63■■□□□ 1.37
SPIDR-220ENST00000522900 CCDC57Q2TAC2 916 aa23.63■■□□□ 1.37
SPIDR-220ENST00000522900 KIF4BQ2VIQ3 1234 aa23.63■■□□□ 1.37
SPIDR-220ENST00000522900 ALDH1L2Q3SY69 923 aa23.63■■□□□ 1.37
SPIDR-220ENST00000522900 MIER1Q8N108 512 aa23.63■■□□□ 1.37
SPIDR-220ENST00000522900 COA1Q9GZY4 146 aa23.63■■□□□ 1.37
SPIDR-220ENST00000522900 ASTN2O75129 1339 aaPredicted RBP23.62■■□□□ 1.37
SPIDR-220ENST00000522900 KCNJ4P48050 445 aa23.61■■□□□ 1.37
SPIDR-220ENST00000522900 DACT2Q5SW24 774 aa23.61■■□□□ 1.37
SPIDR-220ENST00000522900 COL13A1Q5TAT6 717 aaPredicted RBP23.61■■□□□ 1.37
SPIDR-220ENST00000522900 LDHAL6AQ6ZMR3 332 aa23.61■■□□□ 1.37
SPIDR-220ENST00000522900 ZNF408Q9H9D4 720 aa23.61■■□□□ 1.37
SPIDR-220ENST00000522900 SMC4Q9NTJ3 1288 aa23.61■■□□□ 1.37
SPIDR-220ENST00000522900 TLL2Q9Y6L7 1015 aa23.61■■□□□ 1.37
SPIDR-220ENST00000522900 IRS2Q9Y4H2 1338 aa23.6■■□□□ 1.37
SPIDR-220ENST00000522900 PLIN1O60240 522 aa23.6■■□□□ 1.37
SPIDR-220ENST00000522900 USP17L8P0C7I0 530 aa23.6■■□□□ 1.37
SPIDR-220ENST00000522900 TAF7LQ5H9L4 462 aa23.6■■□□□ 1.37
SPIDR-220ENST00000522900 FBXW7Q969H0 707 aa23.6■■□□□ 1.37
SPIDR-220ENST00000522900 WDR33Q9C0J8 1336 aaKnown RBP23.59■■□□□ 1.37
SPIDR-220ENST00000522900 ZNF609O15014 1411 aa23.59■■□□□ 1.37
SPIDR-220ENST00000522900 KRT26Q7Z3Y9 468 aa23.59■■□□□ 1.37
SPIDR-220ENST00000522900 PUS3Q9BZE2 481 aaKnown RBP23.59■■□□□ 1.37
SPIDR-220ENST00000522900 USP44Q9H0E7 712 aa23.59■■□□□ 1.37
SPIDR-220ENST00000522900 BICC1Q9H694 974 aaKnown RBP23.59■■□□□ 1.37
SPIDR-220ENST00000522900 ADM5C9JUS6 153 aa23.58■■□□□ 1.37
SPIDR-220ENST00000522900 SCARF1Q14162 830 aa23.58■■□□□ 1.37
SPIDR-220ENST00000522900 STRIP1Q5VSL9 837 aa23.58■■□□□ 1.37
SPIDR-220ENST00000522900 DIEXFQ68CQ4 756 aaKnown RBP23.58■■□□□ 1.37
SPIDR-220ENST00000522900 CYP4F22Q6NT55 531 aa23.58■■□□□ 1.37
SPIDR-220ENST00000522900 ANKRD44Q8N8A2 993 aa23.58■■□□□ 1.37
SPIDR-220ENST00000522900 DCPSQ96C86 337 aaKnown RBP23.58■■□□□ 1.37
SPIDR-220ENST00000522900 TTLL5Q6EMB2 1281 aa23.57■■□□□ 1.36
SPIDR-220ENST00000522900 C15orf52Q6ZUT6 534 aaKnown RBP23.57■■□□□ 1.36
SPIDR-220ENST00000522900 PAXIP1Q6ZW49 1069 aaPredicted RBP23.57■■□□□ 1.36
SPIDR-220ENST00000522900 SAPCD2Q86UD0 394 aa23.57■■□□□ 1.36
SPIDR-220ENST00000522900 CD209Q9NNX6 404 aa23.57■■□□□ 1.36
SPIDR-220ENST00000522900 MYOZ2Q9NPC6 264 aa23.57■■□□□ 1.36
SPIDR-220ENST00000522900 CNNM1Q9NRU3 951 aa23.57■■□□□ 1.36
SPIDR-220ENST00000522900 GGA3Q9NZ52 723 aa23.57■■□□□ 1.36
SPIDR-220ENST00000522900 NOB1Q9ULX3 412 aaKnown RBP23.57■■□□□ 1.36
SPIDR-220ENST00000522900 GTF2IP78347 998 aa23.56■■□□□ 1.36
SPIDR-220ENST00000522900 GRM1Q13255 1194 aa23.56■■□□□ 1.36
SPIDR-220ENST00000522900 RABL6Q3YEC7 729 aaPredicted RBP23.56■■□□□ 1.36
SPIDR-220ENST00000522900 IFFO2Q5TF58 517 aa23.56■■□□□ 1.36
SPIDR-220ENST00000522900 CAPNS2Q96L46 248 aa23.56■■□□□ 1.36
SPIDR-220ENST00000522900 FOXN1O15353 648 aa23.55■■□□□ 1.36
SPIDR-220ENST00000522900 CT47B1P0C2W7 299 aaPredicted RBP23.55■■□□□ 1.36
SPIDR-220ENST00000522900 ANGEL2Q5VTE6 544 aaKnown RBP23.55■■□□□ 1.36
SPIDR-220ENST00000522900 WBP1LQ9NX94 342 aa23.54■■□□□ 1.36
SPIDR-220ENST00000522900 SCAF8Q9UPN6 1271 aaKnown RBP23.54■■□□□ 1.36
SPIDR-220ENST00000522900 RIPOR2Q9Y4F9 1068 aa23.54■■□□□ 1.36
SPIDR-220ENST00000522900 TRPM7Q96QT4 1865 aa23.53■■□□□ 1.36
SPIDR-220ENST00000522900 RARSP54136 660 aaKnown RBP23.53■■□□□ 1.36
SPIDR-220ENST00000522900 PSME4Q14997 1843 aa23.53■■□□□ 1.36
SPIDR-220ENST00000522900 AOC2O75106 756 aa23.52■■□□□ 1.36
SPIDR-220ENST00000522900 NBPF9Q3BBW0 867 aa23.52■■□□□ 1.36
SPIDR-220ENST00000522900 SULF1Q8IWU6 871 aa23.52■■□□□ 1.36
SPIDR-220ENST00000522900 IL1R1P14778 569 aa23.51■■□□□ 1.35
SPIDR-220ENST00000522900 ECE1P42892 770 aa23.51■■□□□ 1.35
SPIDR-220ENST00000522900 BRPF1P55201 1214 aaPredicted RBP23.51■■□□□ 1.35
SPIDR-220ENST00000522900 LRRC24Q50LG9 513 aa23.51■■□□□ 1.35
SPIDR-220ENST00000522900 KIAA0825Q8IV33 1275 aa23.51■■□□□ 1.35
SPIDR-220ENST00000522900 OGFOD1Q8N543 542 aa23.51■■□□□ 1.35
SPIDR-220ENST00000522900 CERS5Q8N5B7 392 aa23.51■■□□□ 1.35
SPIDR-220ENST00000522900 KLHDC4Q8TBB5 520 aa23.51■■□□□ 1.35
SPIDR-220ENST00000522900 MYO3BQ8WXR4 1341 aa23.51■■□□□ 1.35
SPIDR-220ENST00000522900 ZNF804AQ7Z570 1209 aa23.5■■□□□ 1.35
SPIDR-220ENST00000522900 ZNF646O15015 1829 aaPredicted RBP23.49■■□□□ 1.35
SPIDR-220ENST00000522900 WNT10BO00744 389 aa23.49■■□□□ 1.35
SPIDR-220ENST00000522900 UBE4AQ14139 1066 aa23.49■■□□□ 1.35
SPIDR-220ENST00000522900 CDCA5Q96FF9 252 aa23.49■■□□□ 1.35
SPIDR-220ENST00000522900 HHIPL1Q96JK4 782 aa23.49■■□□□ 1.35
SPIDR-220ENST00000522900 GBA2Q9HCG7 927 aaPredicted RBP23.49■■□□□ 1.35
SPIDR-220ENST00000522900 JAG2Q9Y219 1238 aa23.49■■□□□ 1.35
SPIDR-220ENST00000522900 GYG1P46976 350 aa23.48■■□□□ 1.35
SPIDR-220ENST00000522900 HUNKP57058 714 aa23.48■■□□□ 1.35
SPIDR-220ENST00000522900 API5Q9BZZ5 524 aaKnown RBP23.48■■□□□ 1.35
SPIDR-220ENST00000522900 POLR2AP24928 1970 aaKnown RBP23.48■■□□□ 1.35
SPIDR-220ENST00000522900 SASH1O94885 1247 aa23.47■■□□□ 1.35
SPIDR-220ENST00000522900 PRAMEF18Q5VWM3 479 aa23.47■■□□□ 1.35
SPIDR-220ENST00000522900 C2orf69Q8N8R5 385 aa23.47■■□□□ 1.35
SPIDR-220ENST00000522900 AIDAQ96BJ3 306 aa23.47■■□□□ 1.35
SPIDR-220ENST00000522900 FAM84BQ96KN1 310 aaPredicted RBP23.47■■□□□ 1.35
SPIDR-220ENST00000522900 MROH5Q6ZUA9 1318 aa23.47■■□□□ 1.35
SPIDR-220ENST00000522900 A0A1B0GUL6 1792 aa23.47■■□□□ 1.35
SPIDR-220ENST00000522900 RFX5P48382 616 aaPredicted RBP23.46■■□□□ 1.35
SPIDR-220ENST00000522900 MAP2K1Q02750 393 aaPredicted RBP23.46■■□□□ 1.35
SPIDR-220ENST00000522900 PITPNM2Q9BZ72 1349 aa23.46■■□□□ 1.35
SPIDR-220ENST00000522900 HNRNPUQ00839 825 aaKnown RBP eCLIP23.45■■□□□ 1.34
SPIDR-220ENST00000522900 METTL24Q5JXM2 366 aa23.45■■□□□ 1.34
SPIDR-220ENST00000522900 TDRD7Q8NHU6 1098 aaKnown RBP23.45■■□□□ 1.34
SPIDR-220ENST00000522900 ZBED3Q96IU2 234 aaPredicted RBP23.45■■□□□ 1.34
SPIDR-220ENST00000522900 HDAC9Q9UKV0 1011 aa23.45■■□□□ 1.34
SPIDR-220ENST00000522900 F8W031 263 aaPredicted RBP23.44■■□□□ 1.34
SPIDR-220ENST00000522900 HIBADHP31937 336 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 243.3 ms