RNA–Protein interactions for RNA: ENST00000521580.2

SMIM12-206, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM12, Length 3,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-206ENST00000521580 PDE8BO95263 885 aa16.62■□□□□ 0.25
SMIM12-206ENST00000521580 ZFYP08048 801 aaPredicted RBP16.62■□□□□ 0.25
SMIM12-206ENST00000521580 TTLL5Q6EMB2 1281 aa16.62■□□□□ 0.25
SMIM12-206ENST00000521580 BARGINQ6ZT62 677 aa16.62■□□□□ 0.25
SMIM12-206ENST00000521580 FERMT3Q86UX7 667 aa16.62■□□□□ 0.25
SMIM12-206ENST00000521580 NAP1L2Q9ULW6 460 aaPredicted RBP16.62■□□□□ 0.25
SMIM12-206ENST00000521580 NIP7Q9Y221 180 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMIM12-206ENST00000521580 MCAMP43121 646 aa16.62■□□□□ 0.25
SMIM12-206ENST00000521580 HMGB1P09429 215 aaKnown RBP16.61■□□□□ 0.25
SMIM12-206ENST00000521580 PDCP20941 246 aa16.61■□□□□ 0.25
SMIM12-206ENST00000521580 MPHOSPH8Q99549 860 aa16.61■□□□□ 0.25
SMIM12-206ENST00000521580 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.61■□□□□ 0.25
SMIM12-206ENST00000521580 DNM1Q05193 864 aaKnown RBP16.61■□□□□ 0.25
SMIM12-206ENST00000521580 DHX32Q7L7V1 743 aaKnown RBP16.61■□□□□ 0.25
SMIM12-206ENST00000521580 SMARCC1Q92922 1105 aaPredicted RBP16.61■□□□□ 0.25
SMIM12-206ENST00000521580 SYAP1Q96A49 352 aaPredicted RBP16.61■□□□□ 0.25
SMIM12-206ENST00000521580 CAMTA2O94983 1202 aa16.61■□□□□ 0.25
SMIM12-206ENST00000521580 ANP32BQ92688 251 aaKnown RBP16.61■□□□□ 0.25
SMIM12-206ENST00000521580 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.6■□□□□ 0.25
SMIM12-206ENST00000521580 E7EWF7 191 aa16.6■□□□□ 0.25
SMIM12-206ENST00000521580 UBAP1LF5GYI3 381 aa16.6■□□□□ 0.25
SMIM12-206ENST00000521580 IDH1O75874 414 aaKnown RBP16.6■□□□□ 0.25
SMIM12-206ENST00000521580 HAND2P61296 217 aa16.6■□□□□ 0.25
SMIM12-206ENST00000521580 VGLL2Q8N8G2 317 aa16.6■□□□□ 0.25
SMIM12-206ENST00000521580 APPBP2Q92624 585 aa16.6■□□□□ 0.25
SMIM12-206ENST00000521580 SEC31BQ9NQW1 1179 aa16.6■□□□□ 0.25
SMIM12-206ENST00000521580 PHKA1P46020 1223 aa16.6■□□□□ 0.25
SMIM12-206ENST00000521580 KCNQ4P56696 695 aa16.6■□□□□ 0.25
SMIM12-206ENST00000521580 CHST3Q7LGC8 479 aa16.6■□□□□ 0.25
SMIM12-206ENST00000521580 PUS7LQ9H0K6 701 aaKnown RBP16.6■□□□□ 0.25
SMIM12-206ENST00000521580 JAK2O60674 1132 aa16.59■□□□□ 0.25
SMIM12-206ENST00000521580 PARP10Q53GL7 1025 aa16.59■□□□□ 0.25
SMIM12-206ENST00000521580 CCDC102BQ68D86 513 aa16.59■□□□□ 0.25
SMIM12-206ENST00000521580 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
SMIM12-206ENST00000521580 GTF3C6Q969F1 213 aa16.59■□□□□ 0.25
SMIM12-206ENST00000521580 PUM3Q15397 648 aaKnown RBP16.59■□□□□ 0.25
SMIM12-206ENST00000521580 DDX11Q96FC9 970 aa16.59■□□□□ 0.25
SMIM12-206ENST00000521580 CTNNA3Q9UI47 895 aa16.59■□□□□ 0.25
SMIM12-206ENST00000521580 SNAP23O00161 211 aa16.58■□□□□ 0.25
SMIM12-206ENST00000521580 SLC9C2Q5TAH2 1124 aa16.58■□□□□ 0.25
SMIM12-206ENST00000521580 NUP98P52948 1817 aa16.58■□□□□ 0.25
SMIM12-206ENST00000521580 APOBRQ0VD83 1088 aa16.58■□□□□ 0.24
SMIM12-206ENST00000521580 LRSAM1Q6UWE0 723 aa16.58■□□□□ 0.24
SMIM12-206ENST00000521580 RBSNQ9H1K0 784 aa16.58■□□□□ 0.24
SMIM12-206ENST00000521580 IMMTQ16891 758 aaKnown RBP16.58■□□□□ 0.24
SMIM12-206ENST00000521580 TMEM87AQ8NBN3 555 aa16.58■□□□□ 0.24
SMIM12-206ENST00000521580 LPIN2Q92539 896 aa16.58■□□□□ 0.24
SMIM12-206ENST00000521580 AK7Q96M32 723 aa16.58■□□□□ 0.24
SMIM12-206ENST00000521580 MROH5Q6ZUA9 1318 aa16.58■□□□□ 0.24
SMIM12-206ENST00000521580 WNK3Q9BYP7 1800 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 SLIT2O94813 1529 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 GPAA1O43292 621 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 CCDC152Q4G0S7 254 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 NRAPQ86VF7 1730 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 ZSCAN25Q6NSZ9 544 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 FAM173BQ6P4H8 233 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 FGAP02671 866 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 SLC5A1P13866 664 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 UBE2HP62256 183 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 TTF1Q15361 905 aaPredicted RBP16.57■□□□□ 0.24
SMIM12-206ENST00000521580 FAM184AQ8NB25 1140 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 TRIM44Q96DX7 344 aaPredicted RBP16.57■□□□□ 0.24
SMIM12-206ENST00000521580 PIH1D3Q9NQM4 214 aaKnown RBP16.57■□□□□ 0.24
SMIM12-206ENST00000521580 ZNF652Q9Y2D9 606 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 ABCC12Q96J65 1359 aa16.57■□□□□ 0.24
SMIM12-206ENST00000521580 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
SMIM12-206ENST00000521580 IGHMBP2P38935 993 aaKnown RBP16.56■□□□□ 0.24
SMIM12-206ENST00000521580 UQCRFS1P1P0C7P4 283 aa16.56■□□□□ 0.24
SMIM12-206ENST00000521580 CCT2P78371 535 aaKnown RBP16.56■□□□□ 0.24
SMIM12-206ENST00000521580 SCRN1Q12765 414 aa16.56■□□□□ 0.24
SMIM12-206ENST00000521580 APPP05067 770 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 EXOSC10Q01780 885 aaKnown RBP16.55■□□□□ 0.24
SMIM12-206ENST00000521580 FAM43AQ8N2R8 423 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 H3BQV1 296 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 NTSR2O95665 410 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 IFFO2Q5TF58 517 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 BICDL1Q6ZP65 573 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 ANKRD36CQ5JPF3 1778 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 PHF14O94880 888 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 ADD2P35612 726 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 FOSBP53539 338 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 KRT85P78386 507 aa16.55■□□□□ 0.24
SMIM12-206ENST00000521580 ZNF512BQ96KM6 892 aaPredicted RBP16.55■□□□□ 0.24
SMIM12-206ENST00000521580 TCHHQ07283 1943 aa16.54■□□□□ 0.24
SMIM12-206ENST00000521580 FOXP2O15409 715 aa16.54■□□□□ 0.24
SMIM12-206ENST00000521580 RNF214Q8ND24 703 aa16.54■□□□□ 0.24
SMIM12-206ENST00000521580 SPEF2Q9C093 1822 aa16.54■□□□□ 0.24
SMIM12-206ENST00000521580 PPFIA3O75145 1194 aa16.54■□□□□ 0.24
SMIM12-206ENST00000521580 SMIM5Q71RC9 77 aa16.54■□□□□ 0.24
SMIM12-206ENST00000521580 LINC00116Q8NCU8 138 aa16.54■□□□□ 0.24
SMIM12-206ENST00000521580 PFKFB2O60825 505 aa16.54■□□□□ 0.24
SMIM12-206ENST00000521580 FGFR2P21802 821 aa16.54■□□□□ 0.24
SMIM12-206ENST00000521580 ZNF532Q9HCE3 1301 aa16.53■□□□□ 0.24
SMIM12-206ENST00000521580 ZNF213O14771 459 aa16.53■□□□□ 0.24
SMIM12-206ENST00000521580 GTF2E1P29083 439 aaPredicted RBP16.53■□□□□ 0.24
SMIM12-206ENST00000521580 ARID4AP29374 1257 aaPredicted RBP16.53■□□□□ 0.24
SMIM12-206ENST00000521580 NCOA5Q9HCD5 579 aaKnown RBP16.53■□□□□ 0.24
SMIM12-206ENST00000521580 RALYLQ86SE5 291 aaKnown RBP16.53■□□□□ 0.24
SMIM12-206ENST00000521580 PDE6AP16499 860 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms