RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 SMC4Q9NTJ3 1288 aa21.53■■□□□ 1.04
SQLE-205ENST00000521232 BRPF1P55201 1214 aaPredicted RBP21.52■■□□□ 1.04
SQLE-205ENST00000521232 ZNF280AP59817 542 aaPredicted RBP21.52■■□□□ 1.04
SQLE-205ENST00000521232 RBM26Q5T8P6 1007 aaKnown RBP21.52■■□□□ 1.04
SQLE-205ENST00000521232 LDHAL6AQ6ZMR3 332 aa21.52■■□□□ 1.04
SQLE-205ENST00000521232 ZNF594Q96JF6 807 aaPredicted RBP21.52■■□□□ 1.04
SQLE-205ENST00000521232 TAF5LO75529 589 aa21.51■■□□□ 1.03
SQLE-205ENST00000521232 KCNJ4P48050 445 aa21.51■■□□□ 1.03
SQLE-205ENST00000521232 VEGFBP49765 207 aa21.51■■□□□ 1.03
SQLE-205ENST00000521232 C15orf52Q6ZUT6 534 aaKnown RBP21.51■■□□□ 1.03
SQLE-205ENST00000521232 KLRK1P26718 216 aa21.5■■□□□ 1.03
SQLE-205ENST00000521232 KIF4BQ2VIQ3 1234 aa21.5■■□□□ 1.03
SQLE-205ENST00000521232 RABL6Q3YEC7 729 aaPredicted RBP21.5■■□□□ 1.03
SQLE-205ENST00000521232 TAF7LQ5H9L4 462 aa21.5■■□□□ 1.03
SQLE-205ENST00000521232 DACT2Q5SW24 774 aa21.5■■□□□ 1.03
SQLE-205ENST00000521232 STRIP1Q5VSL9 837 aa21.5■■□□□ 1.03
SQLE-205ENST00000521232 HELBQ8NG08 1087 aaPredicted RBP21.5■■□□□ 1.03
SQLE-205ENST00000521232 USP44Q9H0E7 712 aa21.5■■□□□ 1.03
SQLE-205ENST00000521232 ABT1Q9ULW3 272 aaKnown RBP21.5■■□□□ 1.03
SQLE-205ENST00000521232 IRS2Q9Y4H2 1338 aa21.5■■□□□ 1.03
SQLE-205ENST00000521232 SNAP23O00161 211 aa21.49■■□□□ 1.03
SQLE-205ENST00000521232 USP17L8P0C7I0 530 aa21.49■■□□□ 1.03
SQLE-205ENST00000521232 USP48Q86UV5 1035 aa21.49■■□□□ 1.03
SQLE-205ENST00000521232 CNNM1Q9NRU3 951 aa21.49■■□□□ 1.03
SQLE-205ENST00000521232 A0A1B0GUL6 1792 aa21.48■■□□□ 1.03
SQLE-205ENST00000521232 CELF2O95319 508 aaKnown RBP21.48■■□□□ 1.03
SQLE-205ENST00000521232 HSPA1AP0DMV8 641 aaKnown RBP21.48■■□□□ 1.03
SQLE-205ENST00000521232 HSPA1BP0DMV9 641 aaKnown RBP21.48■■□□□ 1.03
SQLE-205ENST00000521232 BICC1Q9H694 974 aaKnown RBP21.48■■□□□ 1.03
SQLE-205ENST00000521232 CD209Q9NNX6 404 aa21.48■■□□□ 1.03
SQLE-205ENST00000521232 NOB1Q9ULX3 412 aaKnown RBP21.48■■□□□ 1.03
SQLE-205ENST00000521232 TLL2Q9Y6L7 1015 aa21.48■■□□□ 1.03
SQLE-205ENST00000521232 TTLL5Q6EMB2 1281 aa21.47■■□□□ 1.03
SQLE-205ENST00000521232 ANKRD44Q8N8A2 993 aa21.47■■□□□ 1.03
SQLE-205ENST00000521232 DCPSQ96C86 337 aaKnown RBP21.47■■□□□ 1.03
SQLE-205ENST00000521232 MYOZ2Q9NPC6 264 aa21.47■■□□□ 1.03
SQLE-205ENST00000521232 ZNF646O15015 1829 aaPredicted RBP21.47■■□□□ 1.03
SQLE-205ENST00000521232 MYO3BQ8WXR4 1341 aa21.47■■□□□ 1.03
SQLE-205ENST00000521232 MMP14P50281 582 aa21.46■■□□□ 1.03
SQLE-205ENST00000521232 RARSP54136 660 aaKnown RBP21.46■■□□□ 1.03
SQLE-205ENST00000521232 KRT26Q7Z3Y9 468 aa21.46■■□□□ 1.03
SQLE-205ENST00000521232 MXD3Q9BW11 206 aa21.46■■□□□ 1.03
SQLE-205ENST00000521232 SCARF1Q14162 830 aa21.45■■□□□ 1.02
SQLE-205ENST00000521232 SAPCD2Q86UD0 394 aa21.45■■□□□ 1.02
SQLE-205ENST00000521232 PUS3Q9BZE2 481 aaKnown RBP21.45■■□□□ 1.02
SQLE-205ENST00000521232 RIPOR2Q9Y4F9 1068 aa21.45■■□□□ 1.02
SQLE-205ENST00000521232 WDR33Q9C0J8 1336 aaKnown RBP21.45■■□□□ 1.02
SQLE-205ENST00000521232 PLIN1O60240 522 aa21.44■■□□□ 1.02
SQLE-205ENST00000521232 GTF2IP78347 998 aa21.44■■□□□ 1.02
SQLE-205ENST00000521232 DLK2Q6UY11 383 aa21.44■■□□□ 1.02
SQLE-205ENST00000521232 FBXW7Q969H0 707 aa21.44■■□□□ 1.02
SQLE-205ENST00000521232 API5Q9BZZ5 524 aaKnown RBP21.44■■□□□ 1.02
SQLE-205ENST00000521232 IL1R1P14778 569 aa21.43■■□□□ 1.02
SQLE-205ENST00000521232 UBE4AQ14139 1066 aa21.43■■□□□ 1.02
SQLE-205ENST00000521232 OGFOD1Q8N543 542 aa21.43■■□□□ 1.02
SQLE-205ENST00000521232 HHIPL1Q96JK4 782 aa21.43■■□□□ 1.02
SQLE-205ENST00000521232 ZNF408Q9H9D4 720 aa21.43■■□□□ 1.02
SQLE-205ENST00000521232 GGA3Q9NZ52 723 aa21.43■■□□□ 1.02
SQLE-205ENST00000521232 ASTN2O75129 1339 aaPredicted RBP21.43■■□□□ 1.02
SQLE-205ENST00000521232 ECE1P42892 770 aa21.42■■□□□ 1.02
SQLE-205ENST00000521232 MROH5Q6ZUA9 1318 aa21.42■■□□□ 1.02
SQLE-205ENST00000521232 ZNF804AQ7Z570 1209 aa21.42■■□□□ 1.02
SQLE-205ENST00000521232 SULF1Q8IWU6 871 aa21.42■■□□□ 1.02
SQLE-205ENST00000521232 ARHGAP45Q92619 1136 aa21.42■■□□□ 1.02
SQLE-205ENST00000521232 ADM5C9JUS6 153 aa21.41■■□□□ 1.02
SQLE-205ENST00000521232 ANGEL2Q5VTE6 544 aaKnown RBP21.41■■□□□ 1.02
SQLE-205ENST00000521232 CYP4F22Q6NT55 531 aa21.41■■□□□ 1.02
SQLE-205ENST00000521232 CAPNS2Q96L46 248 aa21.41■■□□□ 1.02
SQLE-205ENST00000521232 PITPNM2Q9BZ72 1349 aa21.4■■□□□ 1.02
SQLE-205ENST00000521232 LRRC24Q50LG9 513 aa21.4■■□□□ 1.02
SQLE-205ENST00000521232 WBP1LQ9NX94 342 aa21.4■■□□□ 1.02
SQLE-205ENST00000521232 NBPF9Q3BBW0 867 aa21.39■■□□□ 1.01
SQLE-205ENST00000521232 KIF16BQ96L93 1317 aa21.38■■□□□ 1.01
SQLE-205ENST00000521232 WNT10BO00744 389 aa21.38■■□□□ 1.01
SQLE-205ENST00000521232 SASH1O94885 1247 aa21.38■■□□□ 1.01
SQLE-205ENST00000521232 RFX5P48382 616 aaPredicted RBP21.38■■□□□ 1.01
SQLE-205ENST00000521232 FKBP1AP62942 108 aaKnown RBP21.38■■□□□ 1.01
SQLE-205ENST00000521232 HNRNPUQ00839 825 aaKnown RBP eCLIP21.38■■□□□ 1.01
SQLE-205ENST00000521232 COL13A1Q5TAT6 717 aaPredicted RBP21.38■■□□□ 1.01
SQLE-205ENST00000521232 PAXIP1Q6ZW49 1069 aaPredicted RBP21.38■■□□□ 1.01
SQLE-205ENST00000521232 KIAA0825Q8IV33 1275 aa21.38■■□□□ 1.01
SQLE-205ENST00000521232 CERS5Q8N5B7 392 aa21.38■■□□□ 1.01
SQLE-205ENST00000521232 FAM84BQ96KN1 310 aaPredicted RBP21.38■■□□□ 1.01
SQLE-205ENST00000521232 HDAC9Q9UKV0 1011 aa21.38■■□□□ 1.01
SQLE-205ENST00000521232 UBTFL1P0CB47 393 aaPredicted RBP21.37■■□□□ 1.01
SQLE-205ENST00000521232 HIBADHP31937 336 aaKnown RBP21.37■■□□□ 1.01
SQLE-205ENST00000521232 MAP2K1Q02750 393 aaPredicted RBP21.37■■□□□ 1.01
SQLE-205ENST00000521232 IFFO2Q5TF58 517 aa21.37■■□□□ 1.01
SQLE-205ENST00000521232 TDRD7Q8NHU6 1098 aaKnown RBP21.37■■□□□ 1.01
SQLE-205ENST00000521232 KLHDC4Q8TBB5 520 aa21.37■■□□□ 1.01
SQLE-205ENST00000521232 GBA2Q9HCG7 927 aaPredicted RBP21.37■■□□□ 1.01
SQLE-205ENST00000521232 FOXN1O15353 648 aa21.36■■□□□ 1.01
SQLE-205ENST00000521232 PDE8BO95263 885 aa21.36■■□□□ 1.01
SQLE-205ENST00000521232 MAP2K2P36507 400 aa21.36■■□□□ 1.01
SQLE-205ENST00000521232 METTL24Q5JXM2 366 aa21.36■■□□□ 1.01
SQLE-205ENST00000521232 INTS3Q68E01 1043 aaKnown RBP21.36■■□□□ 1.01
SQLE-205ENST00000521232 VGLL2Q8N8G2 317 aa21.36■■□□□ 1.01
SQLE-205ENST00000521232 C2orf69Q8N8R5 385 aa21.36■■□□□ 1.01
SQLE-205ENST00000521232 CDCA5Q96FF9 252 aa21.36■■□□□ 1.01
SQLE-205ENST00000521232 ZBED3Q96IU2 234 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms