RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 NKTRP30414 1462 aaKnown RBP17.42■□□□□ 0.38
UBR5-207ENST00000520539 TCERG1LQ5VWI1 586 aa17.42■□□□□ 0.38
UBR5-207ENST00000520539 DTNBP1Q96EV8 351 aa17.42■□□□□ 0.38
UBR5-207ENST00000520539 CUX2O14529 1486 aa17.42■□□□□ 0.38
UBR5-207ENST00000520539 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
UBR5-207ENST00000520539 ELP1O95163 1332 aa17.41■□□□□ 0.38
UBR5-207ENST00000520539 CREB3O43889 395 aa17.41■□□□□ 0.38
UBR5-207ENST00000520539 CHMP4BP1P59074 171 aa17.41■□□□□ 0.38
UBR5-207ENST00000520539 RAPGEF4Q8WZA2 1011 aa17.41■□□□□ 0.38
UBR5-207ENST00000520539 SLC12A7Q9Y666 1083 aa17.41■□□□□ 0.38
UBR5-207ENST00000520539 VSIG1Q86XK7 387 aa17.41■□□□□ 0.38
UBR5-207ENST00000520539 PPP2R3AQ06190 1150 aa17.41■□□□□ 0.38
UBR5-207ENST00000520539 ITIH3Q06033 890 aa17.41■□□□□ 0.38
UBR5-207ENST00000520539 TNPO1Q92973 898 aaKnown RBP17.41■□□□□ 0.38
UBR5-207ENST00000520539 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.41■□□□□ 0.38
UBR5-207ENST00000520539 CABS1Q96KC9 395 aa17.41■□□□□ 0.38
UBR5-207ENST00000520539 MAK16Q9BXY0 300 aaKnown RBP17.41■□□□□ 0.38
UBR5-207ENST00000520539 PSMA7O14818 248 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 SEPT2Q15019 361 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 MSH5O43196 834 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 WDHD1O75717 1129 aaPredicted RBP17.4■□□□□ 0.38
UBR5-207ENST00000520539 AACSQ86V21 672 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 PNMA8AQ86V59 439 aaPredicted RBP17.4■□□□□ 0.38
UBR5-207ENST00000520539 CWC27Q6UX04 472 aaKnown RBP17.4■□□□□ 0.38
UBR5-207ENST00000520539 ANGPTL3Q9Y5C1 460 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 SSRP1Q08945 709 aaKnown RBP17.4■□□□□ 0.38
UBR5-207ENST00000520539 TMCO5AQ8N6Q1 288 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 MPHOSPH8Q99549 860 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 HPDP32754 393 aaPredicted RBP17.4■□□□□ 0.38
UBR5-207ENST00000520539 CATIPQ7Z7H3 387 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 P3H4Q92791 437 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 IQCDQ96DY2 449 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 CKAP2LQ8IYA6 745 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 CCDC42Q96M95 316 aa17.4■□□□□ 0.38
UBR5-207ENST00000520539 ANKRD20A4Q4UJ75 823 aa17.39■□□□□ 0.38
UBR5-207ENST00000520539 ANKRD20A8PQ5CZ79 823 aa17.39■□□□□ 0.38
UBR5-207ENST00000520539 ANKRD20A2Q5SQ80 823 aa17.39■□□□□ 0.38
UBR5-207ENST00000520539 ANKRD20A1Q5TYW2 823 aa17.39■□□□□ 0.38
UBR5-207ENST00000520539 RPAP2Q8IXW5 612 aaPredicted RBP17.39■□□□□ 0.38
UBR5-207ENST00000520539 PDXDC1Q6P996 788 aa17.39■□□□□ 0.37
UBR5-207ENST00000520539 TMEM57Q8N5G2 664 aa17.39■□□□□ 0.37
UBR5-207ENST00000520539 RNASELQ05823 741 aaKnown RBP17.39■□□□□ 0.37
UBR5-207ENST00000520539 ZSWIM4Q9H7M6 989 aa17.39■□□□□ 0.37
UBR5-207ENST00000520539 IQCA1Q86XH1 822 aa17.39■□□□□ 0.37
UBR5-207ENST00000520539 SRGAP3O43295 1099 aa17.39■□□□□ 0.37
UBR5-207ENST00000520539 GLRX3O76003 335 aaKnown RBP17.39■□□□□ 0.37
UBR5-207ENST00000520539 NUCKS1Q9H1E3 243 aaKnown RBP17.39■□□□□ 0.37
UBR5-207ENST00000520539 ANKRD20A3Q5VUR7 823 aa17.39■□□□□ 0.37
UBR5-207ENST00000520539 ARHGAP4P98171 946 aa17.39■□□□□ 0.37
UBR5-207ENST00000520539 VWA3BQ502W6 1294 aa17.39■□□□□ 0.37
UBR5-207ENST00000520539 TMEM87AQ8NBN3 555 aa17.39■□□□□ 0.37
UBR5-207ENST00000520539 SCHIP1Q9P0W5 487 aaPredicted RBP17.39■□□□□ 0.37
UBR5-207ENST00000520539 DIXDC1Q155Q3 683 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 DENND2CQ68D51 928 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 KLHL14Q9P2G3 628 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 VPS41P49754 854 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 FOXD1Q16676 465 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 GOLGA5Q8TBA6 731 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 PARP2Q9UGN5 583 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 RNF40O75150 1001 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 DUSP27Q5VZP5 1158 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 ANKRD30BQ9BXX2 1392 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 SLF2Q8IX21 1173 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 YY1AP1Q9H869 796 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 TXNDC9O14530 226 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 TTF1Q15361 905 aaPredicted RBP17.38■□□□□ 0.37
UBR5-207ENST00000520539 AKNAQ7Z591 1439 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 ATF7IPQ6VMQ6 1270 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 IWS1Q96ST2 819 aa17.38■□□□□ 0.37
UBR5-207ENST00000520539 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.37■□□□□ 0.37
UBR5-207ENST00000520539 KIFC3Q9BVG8 833 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 TRAF1Q13077 416 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 C8orf74Q6P047 294 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 BAG5Q9UL15 447 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 ARHGAP42A6NI28 874 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 UBA7P41226 1012 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 RASIP1Q5U651 963 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 SPDL1Q96EA4 605 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 RMDN2Q96LZ7 410 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 PUF60Q9UHX1 559 aaKnown RBP17.37■□□□□ 0.37
UBR5-207ENST00000520539 ATICP31939 592 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 NEK2P51955 445 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 SCOCQ9UIL1 159 aa17.37■□□□□ 0.37
UBR5-207ENST00000520539 CCDC152Q4G0S7 254 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 GGT6Q6P531 493 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 KIF21BO75037 1637 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 SYKP43405 635 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 USP5P45974 858 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 DYNC1I2Q13409 638 aaKnown RBP17.36■□□□□ 0.37
UBR5-207ENST00000520539 EFCAB13Q8IY85 973 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 GTF3C6Q969F1 213 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 TROVE2P10155 538 aaKnown RBP eCLIP17.36■□□□□ 0.37
UBR5-207ENST00000520539 ZC3H6P61129 1189 aaKnown RBP17.36■□□□□ 0.37
UBR5-207ENST00000520539 TRIM68Q6AZZ1 485 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 IFT81Q8WYA0 676 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 PAK2Q13177 524 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 PEX19P40855 299 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 APOEP02649 317 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 TMOD2Q9NZR1 351 aa17.36■□□□□ 0.37
UBR5-207ENST00000520539 TTF2Q9UNY4 1162 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms