RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TRIM28Q13263 835 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-221ENST00000520339 PNMA8AQ86V59 439 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-221ENST00000520339 TTC13Q8NBP0 860 aa12.03□□□□□ -0.48
CTNNA1-221ENST00000520339 PXYLP1Q8TE99 480 aa12.03□□□□□ -0.48
CTNNA1-221ENST00000520339 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
CTNNA1-221ENST00000520339 TMX4Q9H1E5 349 aaPredicted RBP12.03□□□□□ -0.48
CTNNA1-221ENST00000520339 VPS33BQ9H267 617 aa12.03□□□□□ -0.48
CTNNA1-221ENST00000520339 IFT57Q9NWB7 429 aa12.03□□□□□ -0.48
CTNNA1-221ENST00000520339 HYPKQ9NX55 129 aa12.03□□□□□ -0.48
CTNNA1-221ENST00000520339 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
CTNNA1-221ENST00000520339 LAMB4A4D0S4 1761 aa12.02□□□□□ -0.48
CTNNA1-221ENST00000520339 PPIP5K2O43314 1243 aa12.02□□□□□ -0.49
CTNNA1-221ENST00000520339 GRAPQ13588 217 aa12.02□□□□□ -0.49
CTNNA1-221ENST00000520339 DDX46Q7L014 1031 aaKnown RBP12.02□□□□□ -0.49
CTNNA1-221ENST00000520339 NIM1KQ8IY84 436 aa12.02□□□□□ -0.49
CTNNA1-221ENST00000520339 GRAPLQ8TC17 118 aaPredicted RBP12.02□□□□□ -0.49
CTNNA1-221ENST00000520339 GJA3Q9Y6H8 435 aa12.02□□□□□ -0.49
CTNNA1-221ENST00000520339 DLG5Q8TDM6 1919 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 ATP5J2-PTCD1G3V325 749 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 SNPHO15079 494 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 SCNN1DP51172 638 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 CALD1Q05682 793 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 SF3B3Q15393 1217 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 AOC3Q16853 763 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 CNTROBQ8N137 903 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 MPNDQ8N594 471 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 SUPT20HQ8NEM7 779 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 ZNF428Q96B54 188 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 FAM89AQ96GI7 184 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 GOPCQ9HD26 462 aa12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 MKRN1Q9UHC7 482 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-221ENST00000520339 COL4A5P29400 1685 aa12□□□□□ -0.49
CTNNA1-221ENST00000520339 TIAM2Q8IVF5 1701 aa12□□□□□ -0.49
CTNNA1-221ENST00000520339 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
CTNNA1-221ENST00000520339 HSPA1AP0DMV8 641 aaKnown RBP12□□□□□ -0.49
CTNNA1-221ENST00000520339 HSPA1BP0DMV9 641 aaKnown RBP12□□□□□ -0.49
CTNNA1-221ENST00000520339 COL9A1P20849 921 aa12□□□□□ -0.49
CTNNA1-221ENST00000520339 EPS15P42566 896 aa12□□□□□ -0.49
CTNNA1-221ENST00000520339 GNAI1P63096 354 aa12□□□□□ -0.49
CTNNA1-221ENST00000520339 COL13A1Q5TAT6 717 aaPredicted RBP12□□□□□ -0.49
CTNNA1-221ENST00000520339 MAP1SQ66K74 1059 aaPredicted RBP12□□□□□ -0.49
CTNNA1-221ENST00000520339 DPP8Q6V1X1 898 aaPredicted RBP12□□□□□ -0.49
CTNNA1-221ENST00000520339 ZNRF3Q9ULT6 936 aa12□□□□□ -0.49
CTNNA1-221ENST00000520339 ELL2O00472 640 aaPredicted RBP11.99□□□□□ -0.49
CTNNA1-221ENST00000520339 LMOD1P29536 600 aaPredicted RBP11.99□□□□□ -0.49
CTNNA1-221ENST00000520339 CXCL9Q07325 125 aa11.99□□□□□ -0.49
CTNNA1-221ENST00000520339 KIAA2012Q0VF49 1180 aa11.99□□□□□ -0.49
CTNNA1-221ENST00000520339 CCDC184Q52MB2 194 aa11.99□□□□□ -0.49
CTNNA1-221ENST00000520339 TMC4Q7Z404 712 aa11.99□□□□□ -0.49
CTNNA1-221ENST00000520339 C8orf58Q8NAV2 365 aa11.99□□□□□ -0.49
CTNNA1-221ENST00000520339 PCMTD1Q96MG8 357 aaPredicted RBP11.99□□□□□ -0.49
CTNNA1-221ENST00000520339 BEGAINQ9BUH8 593 aa11.99□□□□□ -0.49
CTNNA1-221ENST00000520339 ARFGEF2Q9Y6D5 1785 aa11.99□□□□□ -0.49
CTNNA1-221ENST00000520339 CNTNAP1P78357 1384 aa11.98□□□□□ -0.49
CTNNA1-221ENST00000520339 IRS4O14654 1257 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-221ENST00000520339 USP50Q70EL3 339 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-221ENST00000520339 RIC3Q7Z5B4 369 aa11.98□□□□□ -0.49
CTNNA1-221ENST00000520339 CELF1Q92879 486 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-221ENST00000520339 PHAXQ9H814 394 aaKnown RBP11.98□□□□□ -0.49
CTNNA1-221ENST00000520339 FAM217BQ9NTX9 383 aaPredicted RBP11.98□□□□□ -0.49
CTNNA1-221ENST00000520339 PTPREP23469 700 aa11.97□□□□□ -0.49
CTNNA1-221ENST00000520339 RTL5Q5HYW3 569 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-221ENST00000520339 ZBTB38Q8NAP3 1195 aaPredicted RBP11.97□□□□□ -0.49
CTNNA1-221ENST00000520339 GPRC5DQ9NZD1 345 aa11.97□□□□□ -0.49
CTNNA1-221ENST00000520339 DICER1Q9UPY3 1922 aaKnown RBP11.97□□□□□ -0.49
CTNNA1-221ENST00000520339 NUP98P52948 1817 aa11.97□□□□□ -0.49
CTNNA1-221ENST00000520339 CCDC88AQ3V6T2 1871 aa11.96□□□□□ -0.49
CTNNA1-221ENST00000520339 HOXB1P14653 301 aaPredicted RBP11.96□□□□□ -0.49
CTNNA1-221ENST00000520339 VEGFBP49765 207 aa11.96□□□□□ -0.49
CTNNA1-221ENST00000520339 CCDC27Q2M243 656 aa11.96□□□□□ -0.49
CTNNA1-221ENST00000520339 CCDC30Q5VVM6 783 aa11.96□□□□□ -0.49
CTNNA1-221ENST00000520339 CIAPIN1Q6FI81 312 aa11.96□□□□□ -0.49
CTNNA1-221ENST00000520339 TSPYL6Q8N831 410 aa11.96□□□□□ -0.49
CTNNA1-221ENST00000520339 ADARB2Q9NS39 739 aaKnown RBP11.96□□□□□ -0.49
CTNNA1-221ENST00000520339 FAM198AQ9UFP1 575 aa11.96□□□□□ -0.49
CTNNA1-221ENST00000520339 RASSF10A6NK89 507 aa11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 YDJCA8MPS7 323 aa11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 RAD17O75943 681 aa11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 GMPSP49915 693 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 RPS8P62241 208 aaKnown RBP11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 GPSM2P81274 684 aa11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 FMR1Q06787 632 aaKnown RBP eCLIP11.95□□□□□ -0.55e-7■■■■□ 26
CTNNA1-221ENST00000520339 TNIP1Q15025 636 aa11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 CCDC191Q8NCU4 936 aa11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 MYD88Q99836 296 aa11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 METTL22Q9BUU2 404 aaPredicted RBP11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 CHMP4AQ9BY43 222 aa11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 POLLQ9UGP5 575 aa11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 NSFL1CQ9UNZ2 370 aaKnown RBP11.95□□□□□ -0.5
CTNNA1-221ENST00000520339 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
CTNNA1-221ENST00000520339 PCCAP05165 728 aaPredicted RBP11.94□□□□□ -0.5
CTNNA1-221ENST00000520339 WASHC4Q2M389 1173 aa11.94□□□□□ -0.5
CTNNA1-221ENST00000520339 DEFB115Q30KQ5 88 aa11.94□□□□□ -0.5
CTNNA1-221ENST00000520339 SH3D19Q5HYK7 790 aa11.94□□□□□ -0.5
CTNNA1-221ENST00000520339 WWC1Q8IX03 1113 aa11.94□□□□□ -0.5
CTNNA1-221ENST00000520339 PGAP2Q9UHJ9 254 aa11.94□□□□□ -0.5
CTNNA1-221ENST00000520339 TRAF5O00463 557 aa11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 DDX58O95786 925 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 HSP90B1P14625 803 aaKnown RBP11.93□□□□□ -0.5
CTNNA1-221ENST00000520339 HIRAP54198 1017 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms