RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 LRRC24Q50LG9 513 aa16.08■□□□□ 0.16
PABPC1-205ENST00000518196 ERICH6BQ5W0A0 696 aa16.08■□□□□ 0.16
PABPC1-205ENST00000518196 RTKN2Q8IZC4 609 aa16.08■□□□□ 0.16
PABPC1-205ENST00000518196 PUS3Q9BZE2 481 aaKnown RBP16.08■□□□□ 0.16
PABPC1-205ENST00000518196 ANKRD2Q9GZV1 360 aa16.08■□□□□ 0.16
PABPC1-205ENST00000518196 RWDD1Q9H446 243 aaPredicted RBP16.08■□□□□ 0.16
PABPC1-205ENST00000518196 ANKIB1Q9P2G1 1089 aa16.08■□□□□ 0.16
PABPC1-205ENST00000518196 RIPOR2Q9Y4F9 1068 aa16.08■□□□□ 0.16
PABPC1-205ENST00000518196 MROH5Q6ZUA9 1318 aa16.08■□□□□ 0.16
PABPC1-205ENST00000518196 COL4A1P02462 1669 aa16.08■□□□□ 0.16
PABPC1-205ENST00000518196 IL15P40933 162 aaPredicted RBP16.07■□□□□ 0.16
PABPC1-205ENST00000518196 CHRNDQ07001 517 aa16.07■□□□□ 0.16
PABPC1-205ENST00000518196 METTL24Q5JXM2 366 aa16.07■□□□□ 0.16
PABPC1-205ENST00000518196 MPNDQ8N594 471 aa16.07■□□□□ 0.16
PABPC1-205ENST00000518196 NOP58Q9Y2X3 529 aaKnown RBP16.07■□□□□ 0.16
PABPC1-205ENST00000518196 XDHP47989 1333 aa16.06■□□□□ 0.16
PABPC1-205ENST00000518196 TTLL13PA6NNM8 815 aa16.06■□□□□ 0.16
PABPC1-205ENST00000518196 HDAC1Q13547 482 aaPredicted RBP16.06■□□□□ 0.16
PABPC1-205ENST00000518196 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
PABPC1-205ENST00000518196 ATG9AQ7Z3C6 839 aa16.06■□□□□ 0.16
PABPC1-205ENST00000518196 BMP2KQ9NSY1 1161 aaPredicted RBP16.06■□□□□ 0.16
PABPC1-205ENST00000518196 CEP126Q9P2H0 1117 aa16.06■□□□□ 0.16
PABPC1-205ENST00000518196 NSFL1CQ9UNZ2 370 aaKnown RBP16.06■□□□□ 0.16
PABPC1-205ENST00000518196 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 ATP2B4P23634 1241 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 TIE1P35590 1138 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 GPSM2P81274 684 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 OLFM4Q6UX06 510 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 ERC1Q8IUD2 1116 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 SUPT20HQ8NEM7 779 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 PODXL2Q9NZ53 605 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 GGA1Q9UJY5 639 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 EXOC6BQ9Y2D4 811 aa16.05■□□□□ 0.16
PABPC1-205ENST00000518196 RAB11FIP3O75154 756 aa16.04■□□□□ 0.16
PABPC1-205ENST00000518196 YBX3P16989 372 aaKnown RBP eCLIP16.04■□□□□ 0.164e-36■■□□□ 11.4
PABPC1-205ENST00000518196 KCNJ4P48050 445 aa16.04■□□□□ 0.16
PABPC1-205ENST00000518196 ARHGAP27Q6ZUM4 889 aa16.04■□□□□ 0.16
PABPC1-205ENST00000518196 HELBQ8NG08 1087 aaPredicted RBP16.04■□□□□ 0.16
PABPC1-205ENST00000518196 DCTPP1Q9H773 170 aa16.04■□□□□ 0.16
PABPC1-205ENST00000518196 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
PABPC1-205ENST00000518196 C6orf229H3BNL8 230 aa16.03■□□□□ 0.16
PABPC1-205ENST00000518196 PDE8BO95263 885 aa16.03■□□□□ 0.16
PABPC1-205ENST00000518196 FBXO22Q8NEZ5 403 aa16.03■□□□□ 0.16
PABPC1-205ENST00000518196 PSMD1Q99460 953 aa16.03■□□□□ 0.16
PABPC1-205ENST00000518196 FER1L6Q2WGJ9 1857 aa16.03■□□□□ 0.16
PABPC1-205ENST00000518196 TAF5LO75529 589 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 UFL1O94874 794 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 FKBP4Q02790 459 aaKnown RBP eCLIP16.02■□□□□ 0.16
PABPC1-205ENST00000518196 TFCP2Q12800 502 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 UBE4AQ14139 1066 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 SLC51AQ86UW1 340 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 TBC1D16Q8TBP0 767 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 GCC1Q96CN9 775 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 KIF1BPQ96EK5 621 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 EYA3Q99504 573 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 TAOK3Q9H2K8 898 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 AKAP2Q9Y2D5 859 aa16.02■□□□□ 0.16
PABPC1-205ENST00000518196 ZNF804BA4D1E1 1349 aa16.01■□□□□ 0.15
PABPC1-205ENST00000518196 SRCAPQ6ZRS2 3230 aa16.01■□□□□ 0.15
PABPC1-205ENST00000518196 A0A1B0GUL6 1792 aa16.01■□□□□ 0.15
PABPC1-205ENST00000518196 PPP1R37O75864 691 aa16.01■□□□□ 0.15
PABPC1-205ENST00000518196 SASH1O94885 1247 aa16.01■□□□□ 0.15
PABPC1-205ENST00000518196 MKRN3Q13064 507 aaKnown RBP16.01■□□□□ 0.15
PABPC1-205ENST00000518196 VGLL2Q8N8G2 317 aa16.01■□□□□ 0.15
PABPC1-205ENST00000518196 RTFDC1Q9BY42 306 aaPredicted RBP16.01■□□□□ 0.15
PABPC1-205ENST00000518196 VPS33BQ9H267 617 aa16.01■□□□□ 0.15
PABPC1-205ENST00000518196 POLLQ9UGP5 575 aa16.01■□□□□ 0.15
PABPC1-205ENST00000518196 LTBP3Q9NS15 1303 aa16■□□□□ 0.15
PABPC1-205ENST00000518196 APBB1O00213 710 aa16■□□□□ 0.15
PABPC1-205ENST00000518196 IGHDP01880 384 aa16■□□□□ 0.15
PABPC1-205ENST00000518196 IFIT1P09914 478 aaKnown RBP16■□□□□ 0.15
PABPC1-205ENST00000518196 PUM3Q15397 648 aaKnown RBP16■□□□□ 0.15
PABPC1-205ENST00000518196 RHPN1Q8TCX5 695 aa16■□□□□ 0.15
PABPC1-205ENST00000518196 NFKBIEO00221 500 aa15.99■□□□□ 0.15
PABPC1-205ENST00000518196 SLC5A1P13866 664 aa15.99■□□□□ 0.15
PABPC1-205ENST00000518196 ATP2B3Q16720 1220 aa15.99■□□□□ 0.15
PABPC1-205ENST00000518196 WASHC4Q2M389 1173 aa15.99■□□□□ 0.15
PABPC1-205ENST00000518196 LPIN2Q92539 896 aa15.99■□□□□ 0.15
PABPC1-205ENST00000518196 CCDC136Q96JN2 1154 aa15.99■□□□□ 0.15
PABPC1-205ENST00000518196 LRRCC1Q9C099 1032 aa15.99■□□□□ 0.15
PABPC1-205ENST00000518196 ZC3H12CQ9C0D7 883 aaKnown RBP15.99■□□□□ 0.15
PABPC1-205ENST00000518196 GPR108Q9NPR9 543 aa15.99■□□□□ 0.15
PABPC1-205ENST00000518196 PPP4R2Q9NY27 417 aa15.99■□□□□ 0.15
PABPC1-205ENST00000518196 SNED1Q8TER0 1413 aa15.99■□□□□ 0.15
PABPC1-205ENST00000518196 RASSF7Q02833 373 aa15.98■□□□□ 0.15
PABPC1-205ENST00000518196 LTBP1Q14766 1721 aa15.98■□□□□ 0.15
PABPC1-205ENST00000518196 CCDC88AQ3V6T2 1871 aa15.98■□□□□ 0.15
PABPC1-205ENST00000518196 CLASRPQ8N2M8 674 aaKnown RBP15.98■□□□□ 0.15
PABPC1-205ENST00000518196 G3V3G9 751 aa15.97■□□□□ 0.15
PABPC1-205ENST00000518196 SNAP23O00161 211 aa15.97■□□□□ 0.15
PABPC1-205ENST00000518196 RIMBP2O15034 1052 aa15.97■□□□□ 0.15
PABPC1-205ENST00000518196 PPIP5K2O43314 1243 aa15.97■□□□□ 0.15
PABPC1-205ENST00000518196 FGFR2P21802 821 aa15.97■□□□□ 0.15
PABPC1-205ENST00000518196 CLCN6P51797 869 aa15.97■□□□□ 0.15
PABPC1-205ENST00000518196 TNNI3KQ59H18 835 aa15.97■□□□□ 0.15
PABPC1-205ENST00000518196 C15orf52Q6ZUT6 534 aaKnown RBP15.97■□□□□ 0.15
PABPC1-205ENST00000518196 NEUROD6Q96NK8 337 aa15.97■□□□□ 0.15
PABPC1-205ENST00000518196 ZNF277Q9NRM2 450 aaPredicted RBP15.97■□□□□ 0.15
PABPC1-205ENST00000518196 FPGT-TNNI3KV9GXZ4 949 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms