RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 NUP188Q5SRE5 1749 aa7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 CARNS1A5YM72 827 aa7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PATL2C9JE40 543 aaKnown RBP7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 BRD1O95696 1058 aa7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 GYS1P13807 737 aa7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 LYPD8Q6UX82 237 aa7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 TTLL7Q6ZT98 887 aa7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 TRMT2AQ8IZ69 625 aaKnown RBP7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PPP1R1BQ9UD71 204 aaPredicted RBP7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 USP42Q9H9J4 1324 aaKnown RBP7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 COL15A1P39059 1388 aa7.41□□□□□ -1.22
SCARNA6.1-201ENST00000516989 CAMTA2O94983 1202 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 MMP10P09238 476 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 KCNA1Q09470 495 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 HLFQ16534 295 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 TBC1D9Q6ZT07 1266 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ANKRD13DQ6ZTN6 518 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 OTUD5Q96G74 571 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 SETDB2Q96T68 719 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PHAXQ9H814 394 aaKnown RBP7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 ZNF652Q9Y2D9 606 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 MAFBQ9Y5Q3 323 aaPredicted RBP7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PARP3Q9Y6F1 533 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 PAPPAQ13219 1627 aa7.4□□□□□ -1.22
SCARNA6.1-201ENST00000516989 C5P01031 1676 aa7.4□□□□□ -1.23
SCARNA6.1-201ENST00000516989 KDM3BQ7LBC6 1761 aa7.4□□□□□ -1.23
SCARNA6.1-201ENST00000516989 MYH14Q7Z406 1995 aaKnown RBP7.4□□□□□ -1.23
SCARNA6.1-201ENST00000516989 TAF1LQ8IZX4 1826 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 UBR2Q8IWV8 1755 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 TJP1Q07157 1748 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 MAP3K15Q6ZN16 1313 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 FAM177BA6PVY3 158 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ERVV-1B6SEH8 477 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 TM4SF1P30408 202 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 MFAP1P55081 439 aaKnown RBP7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 TBC1D9BQ66K14 1250 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 CLEC4GQ6UXB4 293 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 G2E3Q7L622 706 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 LRP10Q7Z4F1 713 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ZNF687Q8N1G0 1237 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 MRPL50Q8N5N7 158 aaKnown RBP7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 LRCH3Q96II8 777 aa7.39□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ZNF831Q5JPB2 1677 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 NPHP1O15259 732 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ATG7O95352 703 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 DDX58O95786 925 aaKnown RBP7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 GPTP24298 496 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 EMP3P54852 163 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 NR1H3Q13133 447 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 FKBP5Q13451 457 aaPredicted RBP7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 NFIXQ14938 502 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 HSP90AB3PQ58FF7 597 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 BLOC1S3Q6QNY0 202 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 RNF19BQ6ZMZ0 732 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 RGS22Q8NE09 1264 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 PLBD2Q8NHP8 589 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 SSH1Q8WYL5 1049 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 USB1Q9BQ65 265 aaKnown RBP7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 BCL2L13Q9BXK5 485 aa7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 NIP7Q9Y221 180 aaKnown RBP eCLIP7.38□□□□□ -1.23
SCARNA6.1-201ENST00000516989 PI4KAP2A4QPH2 592 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 TK2O00142 265 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ATP9BO43861 1147 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 SERPINB2P05120 415 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 CT47B1P0C2W7 299 aaPredicted RBP7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 GTF2E1P29083 439 aaPredicted RBP7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 TCIRG1Q13488 830 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 BRICD5Q6PL45 260 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 KSR2Q6VAB6 950 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 PI4KAP1Q8N8J0 262 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ZNF428Q96B54 188 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 PRR14Q9BWN1 585 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 VRTNQ9H8Y1 702 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 SMC4Q9NTJ3 1288 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 MTMR7Q9Y216 660 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 MAP3K2Q9Y2U5 619 aa7.37□□□□□ -1.23
SCARNA6.1-201ENST00000516989 COL5A3P25940 1745 aaPredicted RBP7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 FAM205CA6NFA0 338 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ZBBXA8MT70 800 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ATP5J2-PTCD1G3V325 749 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 POLRMTO00411 1230 aaKnown RBP7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ST18O60284 1047 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 FBXO45P0C2W1 286 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 RARSP54136 660 aaKnown RBP7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 DDR1Q08345 913 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 NEXNQ0ZGT2 675 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ALDH1L2Q3SY69 923 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 TPTE2Q6XPS3 522 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 NBPF5PQ86XG9 351 aaPredicted RBP7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 ZNF34Q8IZ26 560 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 CCDC24Q8N4L8 307 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 MARVELD3Q96A59 401 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 MYD88Q99836 296 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 UBR3Q6ZT12 1888 aa7.36□□□□□ -1.23
SCARNA6.1-201ENST00000516989 F6X3S4 739 aa7.35□□□□□ -1.23
SCARNA6.1-201ENST00000516989 BCAR3O75815 825 aa7.35□□□□□ -1.23
SCARNA6.1-201ENST00000516989 SUSD4Q5VX71 490 aa7.35□□□□□ -1.23
SCARNA6.1-201ENST00000516989 SLC4A10Q6U841 1118 aa7.35□□□□□ -1.23
SCARNA6.1-201ENST00000516989 PPP1R42Q7Z4L9 355 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms