RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CNNM1Q9NRU3 951 aa12.29□□□□□ -0.44
SNF8-214ENST00000515174 PAG1Q9NWQ8 432 aa12.29□□□□□ -0.44
SNF8-214ENST00000515174 CCDC171Q6TFL3 1326 aa12.29□□□□□ -0.44
SNF8-214ENST00000515174 KIF13BQ9NQT8 1826 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 FAM177BA6PVY3 158 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 KIF3CO14782 793 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 ZPR1O75312 459 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 ZFYP08048 801 aaPredicted RBP12.28□□□□□ -0.44
SNF8-214ENST00000515174 IFIT1P09914 478 aaKnown RBP12.28□□□□□ -0.44
SNF8-214ENST00000515174 RFC4P35249 363 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 ATP2B3Q16720 1220 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 MCMDC2Q4G0Z9 681 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 TRAPPC3LQ5T215 181 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 LPIN2Q92539 896 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 CDC5LQ99459 802 aaKnown RBP12.28□□□□□ -0.44
SNF8-214ENST00000515174 ALDH8A1Q9H2A2 487 aaPredicted RBP12.28□□□□□ -0.44
SNF8-214ENST00000515174 HMG20BQ9P0W2 317 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 SNX14Q9Y5W7 946 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 GOLGB1Q14789 3259 aaKnown RBP12.28□□□□□ -0.44
SNF8-214ENST00000515174 LRRC37AA6NMS7 1700 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 KIAA1551Q9HCM1 1747 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 RIC1Q4ADV7 1423 aa12.28□□□□□ -0.44
SNF8-214ENST00000515174 TAF5LO75529 589 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 UQCRFS1P1P0C7P4 283 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 HCLS1P14317 486 aaPredicted RBP12.27□□□□□ -0.45
SNF8-214ENST00000515174 NEK4P51957 841 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 CUL4AQ13619 759 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 PUM3Q15397 648 aaKnown RBP12.27□□□□□ -0.45
SNF8-214ENST00000515174 NFKBIBQ15653 356 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 ZMYM1Q5SVZ6 1142 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 RNF20Q5VTR2 975 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 BICDL1Q6ZP65 573 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 INTS4Q96HW7 963 aaKnown RBP12.27□□□□□ -0.45
SNF8-214ENST00000515174 FAM227BQ96M60 508 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 SETDB2Q96T68 719 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 PALD1Q9ULE6 856 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 CARMIL3Q8ND23 1372 aa12.27□□□□□ -0.45
SNF8-214ENST00000515174 A0A0D9SFI3 127 aa12.26□□□□□ -0.45
SNF8-214ENST00000515174 GYS1P13807 737 aa12.26□□□□□ -0.45
SNF8-214ENST00000515174 ZKSCAN1P17029 563 aaPredicted RBP12.26□□□□□ -0.45
SNF8-214ENST00000515174 ARID4AP29374 1257 aaPredicted RBP12.26□□□□□ -0.45
SNF8-214ENST00000515174 IGHMBP2P38935 993 aaKnown RBP12.26□□□□□ -0.45
SNF8-214ENST00000515174 PTH1RQ03431 593 aa12.26□□□□□ -0.45
SNF8-214ENST00000515174 GORABQ5T7V8 394 aa12.26□□□□□ -0.45
SNF8-214ENST00000515174 TPTE2Q6XPS3 522 aa12.26□□□□□ -0.45
SNF8-214ENST00000515174 MPHOSPH8Q99549 860 aa12.26□□□□□ -0.45
SNF8-214ENST00000515174 ZSWIM6Q9HCJ5 1215 aa12.26□□□□□ -0.45
SNF8-214ENST00000515174 RNF113AO15541 343 aaKnown RBP12.25□□□□□ -0.45
SNF8-214ENST00000515174 CAPN15O75808 1086 aa12.25□□□□□ -0.45
SNF8-214ENST00000515174 PSMA5P28066 241 aa12.25□□□□□ -0.45
SNF8-214ENST00000515174 TTF1Q15361 905 aaPredicted RBP12.25□□□□□ -0.45
SNF8-214ENST00000515174 TTC39AQ5SRH9 613 aa12.25□□□□□ -0.45
SNF8-214ENST00000515174 CLEC17AQ6ZS10 378 aa12.25□□□□□ -0.45
SNF8-214ENST00000515174 RASEFQ8IZ41 740 aa12.25□□□□□ -0.45
SNF8-214ENST00000515174 TTC14Q96N46 770 aa12.25□□□□□ -0.45
SNF8-214ENST00000515174 DSCC1Q9BVC3 393 aa12.25□□□□□ -0.45
SNF8-214ENST00000515174 SLKQ9H2G2 1235 aaPredicted RBP12.25□□□□□ -0.45
SNF8-214ENST00000515174 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
SNF8-214ENST00000515174 RBM8AQ9Y5S9 174 aaKnown RBP12.25□□□□□ -0.45
SNF8-214ENST00000515174 U3KPZ7 1027 aaPredicted RBP12.25□□□□□ -0.45
SNF8-214ENST00000515174 GOLIM4O00461 696 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 TOMM70O94826 608 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 SLC5A1P13866 664 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 ADORA1P30542 326 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 KRT32Q14532 448 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 NFIXQ14938 502 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 ERFEQ4G0M1 354 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 VPS53Q5VIR6 699 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 CREB3L3Q68CJ9 461 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 ZSCAN25Q6NSZ9 544 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 EDC3Q96F86 508 aaKnown RBP12.24□□□□□ -0.45
SNF8-214ENST00000515174 CCDC85AQ96PX6 553 aaPredicted RBP12.24□□□□□ -0.45
SNF8-214ENST00000515174 DNAJC2Q99543 621 aaKnown RBP12.24□□□□□ -0.45
SNF8-214ENST00000515174 MYH13Q9UKX3 1938 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 BCS1LQ9Y276 419 aa12.24□□□□□ -0.45
SNF8-214ENST00000515174 BRCA1P38398 1863 aaKnown RBP12.23□□□□□ -0.45
SNF8-214ENST00000515174 IGSF3O75054 1194 aa12.23□□□□□ -0.45
SNF8-214ENST00000515174 HSP90AA1P07900 732 aaKnown RBP12.23□□□□□ -0.45
SNF8-214ENST00000515174 NUCB2P80303 420 aa12.23□□□□□ -0.45
SNF8-214ENST00000515174 DDR1Q08345 913 aa12.23□□□□□ -0.45
SNF8-214ENST00000515174 UBE4AQ14139 1066 aa12.23□□□□□ -0.45
SNF8-214ENST00000515174 RAB3GAP1Q15042 981 aa12.23□□□□□ -0.45
SNF8-214ENST00000515174 ARHGAP27Q6ZUM4 889 aa12.23□□□□□ -0.45
SNF8-214ENST00000515174 DDX46Q7L014 1031 aaKnown RBP12.23□□□□□ -0.45
SNF8-214ENST00000515174 TMX3Q96JJ7 454 aa12.23□□□□□ -0.45
SNF8-214ENST00000515174 NLRP3Q96P20 1036 aa12.23□□□□□ -0.45
SNF8-214ENST00000515174 SEC31BQ9NQW1 1179 aa12.23□□□□□ -0.45
SNF8-214ENST00000515174 RPAP1Q9BWH6 1393 aaPredicted RBP12.22□□□□□ -0.45
SNF8-214ENST00000515174 SLC27A2O14975 620 aa12.22□□□□□ -0.45
SNF8-214ENST00000515174 UBE3CQ15386 1083 aa12.22□□□□□ -0.45
SNF8-214ENST00000515174 CCDC102BQ68D86 513 aa12.22□□□□□ -0.45
SNF8-214ENST00000515174 ZNF589Q86UQ0 364 aaPredicted RBP12.22□□□□□ -0.45
SNF8-214ENST00000515174 NBPF5PQ86XG9 351 aaPredicted RBP12.22□□□□□ -0.45
SNF8-214ENST00000515174 ANKRD18AQ8IVF6 992 aa12.22□□□□□ -0.45
SNF8-214ENST00000515174 ZSCAN31Q96LW9 406 aaPredicted RBP12.22□□□□□ -0.45
SNF8-214ENST00000515174 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNF8-214ENST00000515174 MMP10P09238 476 aa12.21□□□□□ -0.45
SNF8-214ENST00000515174 PDIA4P13667 645 aaKnown RBP12.21□□□□□ -0.45
SNF8-214ENST00000515174 GTF2E1P29083 439 aaPredicted RBP12.21□□□□□ -0.45
SNF8-214ENST00000515174 MCAMP43121 646 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms