RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CLCN6P51797 869 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 NEK2P51955 445 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 SEPT6Q14141 434 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 TBC1D10BQ4KMP7 808 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 FAM26DQ5JW98 314 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 PDXDC2PQ6P474 469 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 TRAF7Q6Q0C0 670 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 PI16Q6UXB8 463 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 FAM169BQ8N8A8 192 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 RASGRP4Q8TDF6 673 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 JARID2Q92833 1246 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 PGBD4Q96DM1 585 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 PDGFDQ9GZP0 370 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 RBSNQ9H1K0 784 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 MSRB2Q9Y3D2 182 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 PDS5BQ9NTI5 1447 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 CEP164Q9UPV0 1460 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 RUSC2Q8N2Y8 1516 aa7.62□□□□□ -1.19
TRAPPC11-209ENST00000512476 RASSF10A6NK89 507 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 RASGRP1O95267 797 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 ATICP31939 592 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 EIF1AXP47813 144 aaKnown RBP7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 NUCB1Q02818 461 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 CBX2Q14781 532 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 TAF11Q15544 211 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 SIX5Q8N196 739 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 HOOK2Q96ED9 719 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 ZNF830Q96NB3 372 aaPredicted RBP7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 EYA1Q99502 592 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 ZNF69Q9UC07 566 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 GTF2A1LQ9UNN4 478 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 FAM50BQ9Y247 325 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 DIAPH1O60610 1272 aaKnown RBP7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 CASP2P42575 452 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 ZC3H12AQ5D1E8 599 aaKnown RBP7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 CCDC102BQ68D86 513 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 STRA8Q7Z7C7 330 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 ATRIPQ8WXE1 791 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 FAM129BQ96TA1 746 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 GINM1Q9NU53 330 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 FAM198AQ9UFP1 575 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 AK5Q9Y6K8 562 aa7.61□□□□□ -1.19
TRAPPC11-209ENST00000512476 WEE1P30291 646 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 RASSF3Q86WH2 238 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 SMAP1Q8IYB5 467 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 NDUFAF2Q8N183 169 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 TRIM52Q96A61 297 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 TRIM8Q9BZR9 551 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 FAM13BQ9NYF5 915 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 PFDN2Q9UHV9 154 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 DNAJB2P25686 324 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 OAS2P29728 719 aaKnown RBP7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 HOXC13P31276 330 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 PIN1Q13526 163 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 E2F5Q15329 346 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 PPP4R3AQ6IN85 833 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 SPATC1Q76KD6 591 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 TPH2Q8IWU9 490 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 KBTBD4Q9NVX7 518 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 FNIP2Q9P278 1114 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 RBM19Q9Y4C8 960 aaKnown RBP7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 DNMBPQ6XZF7 1577 aa7.6□□□□□ -1.19
TRAPPC11-209ENST00000512476 hCG_1642624A0A1W2PR95 340 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 ZBTB39O15060 712 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 ORC4O43929 436 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 ATP2B2Q01814 1243 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 HYIQ5T013 277 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 ZNF713Q8N859 430 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 TTC13Q8NBP0 860 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 CHMP7Q8WUX9 453 aaPredicted RBP7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 CCDC34Q96HJ3 373 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 ZSWIM6Q9HCJ5 1215 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 KIF21AQ7Z4S6 1674 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 OPLAHO14841 1288 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 PPFIA3O75145 1194 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 TNFRSF21O75509 655 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 ORC1Q13415 861 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 MAGEB6Q8N7X4 407 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 SNX21Q969T3 373 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 KIFC2Q96AC6 838 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 TMEM63CQ9P1W3 806 aa7.59□□□□□ -1.19
TRAPPC11-209ENST00000512476 NAT1P18440 290 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 GOLGA2Q08379 1002 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 XRRA1Q6P2D8 792 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 RNF180Q86T96 592 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 OR8H2Q8N162 312 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 PNMA1Q8ND90 353 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 SNRNP27Q8WVK2 155 aaKnown RBP7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 CDHR1Q96JP9 859 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 YIPF4Q9BSR8 244 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 C2orf49Q9BVC5 232 aaPredicted RBP7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 TMCC3Q9ULS5 477 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 PTCH2Q9Y6C5 1203 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 TOPBP1Q92547 1522 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 PDE8AO60658 829 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 FAM13AO94988 1023 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 ECE1P42892 770 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 PRSS12P56730 875 aa7.58□□□□□ -1.2
TRAPPC11-209ENST00000512476 FAM102BQ5T8I3 360 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms