RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 FAM13AO94988 1023 aa10.36□□□□□ -0.75
NUP54-209ENST00000510569 ALX3O95076 343 aa10.36□□□□□ -0.75
NUP54-209ENST00000510569 EPHA1P21709 976 aa10.36□□□□□ -0.75
NUP54-209ENST00000510569 CES1P23141 567 aa10.36□□□□□ -0.75
NUP54-209ENST00000510569 SF3B2Q13435 895 aaKnown RBP10.36□□□□□ -0.75
NUP54-209ENST00000510569 POP1Q99575 1024 aaKnown RBP10.36□□□□□ -0.75
NUP54-209ENST00000510569 NFKBIEO00221 500 aa10.35□□□□□ -0.75
NUP54-209ENST00000510569 C8orf34Q49A92 452 aa10.35□□□□□ -0.75
NUP54-209ENST00000510569 TXNDC11Q6PKC3 985 aa10.35□□□□□ -0.75
NUP54-209ENST00000510569 ACPPP15309 386 aa10.34□□□□□ -0.75
NUP54-209ENST00000510569 CD68P34810 354 aaPredicted RBP10.34□□□□□ -0.75
NUP54-209ENST00000510569 FKBP4Q02790 459 aaKnown RBP eCLIP10.34□□□□□ -0.75
NUP54-209ENST00000510569 PRR23CQ6ZRP0 262 aa10.34□□□□□ -0.75
NUP54-209ENST00000510569 KLHL23Q8NBE8 558 aa10.34□□□□□ -0.75
NUP54-209ENST00000510569 TTC16Q8NEE8 873 aa10.34□□□□□ -0.75
NUP54-209ENST00000510569 PMEPA1Q969W9 287 aa10.34□□□□□ -0.75
NUP54-209ENST00000510569 SH2B1Q9NRF2 756 aaPredicted RBP10.34□□□□□ -0.75
NUP54-209ENST00000510569 DZANK1Q9NVP4 752 aa10.34□□□□□ -0.75
NUP54-209ENST00000510569 FSCN2O14926 492 aa10.33□□□□□ -0.76
NUP54-209ENST00000510569 FZD6O60353 706 aa10.33□□□□□ -0.76
NUP54-209ENST00000510569 WISP1O95388 367 aa10.33□□□□□ -0.76
NUP54-209ENST00000510569 USP5P45974 858 aa10.33□□□□□ -0.76
NUP54-209ENST00000510569 FAM117BQ6P1L5 589 aa10.33□□□□□ -0.76
NUP54-209ENST00000510569 AGGF1Q8N302 714 aaeCLIP10.33□□□□□ -0.76
NUP54-209ENST00000510569 SNX29Q8TEQ0 813 aa10.33□□□□□ -0.76
NUP54-209ENST00000510569 H3BRJ5 948 aa10.32□□□□□ -0.76
NUP54-209ENST00000510569 TNFRSF21O75509 655 aa10.32□□□□□ -0.76
NUP54-209ENST00000510569 EHHADHQ08426 723 aa10.32□□□□□ -0.76
NUP54-209ENST00000510569 WNT8BQ93098 351 aa10.32□□□□□ -0.76
NUP54-209ENST00000510569 KCNK4Q9NYG8 393 aa10.32□□□□□ -0.76
NUP54-209ENST00000510569 ARTNQ5T4W7 220 aa10.31□□□□□ -0.76
NUP54-209ENST00000510569 GJD3Q8N144 294 aa10.31□□□□□ -0.76
NUP54-209ENST00000510569 CARD10Q9BWT7 1032 aa10.31□□□□□ -0.76
NUP54-209ENST00000510569 EGFL7Q9UHF1 273 aa10.31□□□□□ -0.76
NUP54-209ENST00000510569 SCO2A0A1W2PP80 73 aa10.3□□□□□ -0.76
NUP54-209ENST00000510569 FAM177BA6PVY3 158 aa10.3□□□□□ -0.76
NUP54-209ENST00000510569 PDE2AO00408 941 aaPredicted RBP10.3□□□□□ -0.76
NUP54-209ENST00000510569 ZNF211Q13398 564 aaPredicted RBP10.3□□□□□ -0.76
NUP54-209ENST00000510569 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
NUP54-209ENST00000510569 TMEM102Q8N9M5 508 aaPredicted RBP10.3□□□□□ -0.76
NUP54-209ENST00000510569 FOXD4L4Q8WXT5 416 aaPredicted RBP10.3□□□□□ -0.76
NUP54-209ENST00000510569 SOX13Q9UN79 622 aa10.3□□□□□ -0.76
NUP54-209ENST00000510569 EREGO14944 169 aa10.29□□□□□ -0.76
NUP54-209ENST00000510569 PHACTR2O75167 634 aa10.29□□□□□ -0.76
NUP54-209ENST00000510569 ABL1P00519 1130 aa10.29□□□□□ -0.76
NUP54-209ENST00000510569 GLB1P16278 677 aa10.29□□□□□ -0.76
NUP54-209ENST00000510569 CDC25BP30305 580 aa10.29□□□□□ -0.76
NUP54-209ENST00000510569 PIP4K2BP78356 416 aa10.29□□□□□ -0.76
NUP54-209ENST00000510569 AAMPQ13685 434 aa10.29□□□□□ -0.76
NUP54-209ENST00000510569 ACAD11Q709F0 780 aa10.29□□□□□ -0.76
NUP54-209ENST00000510569 HHIPQ96QV1 700 aa10.29□□□□□ -0.76
NUP54-209ENST00000510569 SEC31BQ9NQW1 1179 aa10.29□□□□□ -0.76
NUP54-209ENST00000510569 ADAM11O75078 769 aa10.28□□□□□ -0.76
NUP54-209ENST00000510569 CABP4P57796 275 aa10.28□□□□□ -0.76
NUP54-209ENST00000510569 KIAA1211Q6ZU35 1233 aa10.28□□□□□ -0.76
NUP54-209ENST00000510569 ZKSCAN3Q9BRR0 538 aa10.28□□□□□ -0.76
NUP54-209ENST00000510569 OSGEPQ9NPF4 335 aa10.28□□□□□ -0.76
NUP54-209ENST00000510569 FOXD3Q9UJU5 478 aaPredicted RBP10.28□□□□□ -0.76
NUP54-209ENST00000510569 EDN3P14138 238 aa10.27□□□□□ -0.77
NUP54-209ENST00000510569 LRP8Q14114 963 aa10.27□□□□□ -0.77
NUP54-209ENST00000510569 UBL7Q96S82 380 aaPredicted RBP10.27□□□□□ -0.77
NUP54-209ENST00000510569 CEP41Q9BYV8 373 aa10.27□□□□□ -0.77
NUP54-209ENST00000510569 ZFP64Q9NPA5 681 aa10.27□□□□□ -0.77
NUP54-209ENST00000510569 ANO2Q9NQ90 1003 aa10.27□□□□□ -0.77
NUP54-209ENST00000510569 CCDC87Q9NVE4 849 aa10.27□□□□□ -0.77
NUP54-209ENST00000510569 ICMTO60725 284 aa10.26□□□□□ -0.77
NUP54-209ENST00000510569 TRPA1O75762 1119 aa10.26□□□□□ -0.77
NUP54-209ENST00000510569 DUOXA2Q1HG44 320 aa10.26□□□□□ -0.77
NUP54-209ENST00000510569 SLC51AQ86UW1 340 aa10.26□□□□□ -0.77
NUP54-209ENST00000510569 NXPE3Q969Y0 559 aa10.26□□□□□ -0.77
NUP54-209ENST00000510569 KLHDC7BQ96G42 594 aa10.26□□□□□ -0.77
NUP54-209ENST00000510569 OSMRQ99650 979 aa10.26□□□□□ -0.77
NUP54-209ENST00000510569 UVSSAQ2YD98 709 aa10.25□□□□□ -0.77
NUP54-209ENST00000510569 UBASH3BQ8TF42 649 aa10.25□□□□□ -0.77
NUP54-209ENST00000510569 BHLHE41Q9C0J9 482 aaPredicted RBP10.25□□□□□ -0.77
NUP54-209ENST00000510569 RNF112Q9ULX5 631 aa10.25□□□□□ -0.77
NUP54-209ENST00000510569 DDX3YO15523 660 aaKnown RBP10.24□□□□□ -0.77
NUP54-209ENST00000510569 FSTP19883 344 aa10.24□□□□□ -0.77
NUP54-209ENST00000510569 FAM46AQ96IP4 442 aaKnown RBP10.24□□□□□ -0.77
NUP54-209ENST00000510569 AMOTL2Q9Y2J4 779 aa10.24□□□□□ -0.77
NUP54-209ENST00000510569 ECM1Q16610 540 aa10.23□□□□□ -0.77
NUP54-209ENST00000510569 PEAR1Q5VY43 1037 aaPredicted RBP10.23□□□□□ -0.77
NUP54-209ENST00000510569 ARMC10Q8N2F6 343 aa10.23□□□□□ -0.77
NUP54-209ENST00000510569 BSNDQ8WZ55 320 aa10.23□□□□□ -0.77
NUP54-209ENST00000510569 RAXQ9Y2V3 346 aa10.23□□□□□ -0.77
NUP54-209ENST00000510569 VN1R5Q7Z5H4 357 aa10.22□□□□□ -0.77
NUP54-209ENST00000510569 H3BRB1 525 aa10.21□□□□□ -0.77
NUP54-209ENST00000510569 SERPINB4P48594 390 aa10.21□□□□□ -0.77
NUP54-209ENST00000510569 ERICH6Q7L0X2 663 aa10.21□□□□□ -0.77
NUP54-209ENST00000510569 TUT1Q9H6E5 874 aaKnown RBP10.21□□□□□ -0.77
NUP54-209ENST00000510569 ZFYVE28Q9HCC9 887 aa10.21□□□□□ -0.77
NUP54-209ENST00000510569 LATS2Q9NRM7 1088 aa10.21□□□□□ -0.77
NUP54-209ENST00000510569 DHX15O43143 795 aaKnown RBP10.2□□□□□ -0.78
NUP54-209ENST00000510569 C19orf57Q0VDD7 668 aa10.2□□□□□ -0.78
NUP54-209ENST00000510569 UTP4Q969X6 686 aaKnown RBP10.2□□□□□ -0.78
NUP54-209ENST00000510569 RNF208Q9H0X6 261 aa10.2□□□□□ -0.78
NUP54-209ENST00000510569 HYAL3O43820 417 aaPredicted RBP10.19□□□□□ -0.78
NUP54-209ENST00000510569 ARL4DP49703 201 aa10.19□□□□□ -0.78
NUP54-209ENST00000510569 ARHGAP4P98171 946 aa10.19□□□□□ -0.78
NUP54-209ENST00000510569 HGSNATQ68CP4 663 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms